RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 PRELID1Q9Y255 219 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 C11orf94C9JXX5 98 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 K7EQG2 157 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 ISLRO14498 428 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 ID1P41134 155 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 CD81P60033 236 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 SRSF3P84103 164 aaKnown RBP6.02□□□□□ -1.45
CPNE3-209ENST00000620393 TOR2AQ5JU69 321 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 IGFL4Q6B9Z1 124 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 LCN12Q6JVE5 192 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 COMMD7Q86VX2 200 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 EXOC3-AS1Q8N2X6 119 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 ARL6IP6Q8N6S5 226 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 RXFP4Q8TDU9 374 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 SPAG8Q99932 426 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-209ENST00000620393 MRPL18Q9H0U6 180 aaKnown RBP6.02□□□□□ -1.45
CPNE3-209ENST00000620393 AAMDCQ9H7C9 122 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 EPDR1Q9UM22 224 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 TENM1Q9UKZ4 2725 aa6.02□□□□□ -1.45
CPNE3-209ENST00000620393 IZUMO1RA6ND01 250 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 GGTLC3B5MD39 225 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 C9JQL5 133 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 SRP19P09132 144 aaKnown RBP6.01□□□□□ -1.45
CPNE3-209ENST00000620393 HLA-DMBP28068 263 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 ATP5G3P48201 142 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 TFPI2P48307 235 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 MEF2BQ02080 365 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-209ENST00000620393 PSG3Q16557 428 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 UQCC3Q6UW78 93 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 SLC7A5P1Q8MH63 180 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 CMTM2Q8TAZ6 248 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 MRPL53Q96EL3 112 aaKnown RBP6.01□□□□□ -1.45
CPNE3-209ENST00000620393 C20orf173Q96LM9 149 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 TCEAL7Q9BRU2 100 aa6.01□□□□□ -1.45
CPNE3-209ENST00000620393 ZNF256Q9Y2P7 627 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-209ENST00000620393 OR4C46A6NHA9 309 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 F6UZH7 168 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 TMEM250H0YL14 139 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 M0R3E3 92 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 PDE6DO43924 150 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 SLC25A5P05141 298 aaKnown RBP6□□□□□ -1.45
CPNE3-209ENST00000620393 IGLL1P15814 213 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 CSN1S1P47710 185 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 CMC4P56277 68 aaPredicted RBP6□□□□□ -1.45
CPNE3-209ENST00000620393 SNRPD3P62318 126 aaKnown RBP6□□□□□ -1.45
CPNE3-209ENST00000620393 GUCA2BQ16661 112 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 BEAN1Q3B7T3 259 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 PRR31Q5SQ13 230 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 C5orf17Q8NAS9 161 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 HIST1H2BAQ96A08 127 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 LINC00052Q96N35 136 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 SLC35B3Q9H1N7 401 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 TREM1Q9NP99 234 aa6□□□□□ -1.45
CPNE3-209ENST00000620393 TRRAPQ9Y4A5 3859 aa5.99□□□□□ -1.45
CPNE3-209ENST00000620393 ZNF705FA8MVS1 300 aaPredicted RBP5.99□□□□□ -1.45
CPNE3-209ENST00000620393 DIRC3C9JPN6 131 aa5.99□□□□□ -1.45
CPNE3-209ENST00000620393 TCRAP04437 139 aa5.99□□□□□ -1.45
CPNE3-209ENST00000620393 FAM24BQ8N5W8 94 aa5.99□□□□□ -1.45
CPNE3-209ENST00000620393 RNF182Q8N6D2 247 aa5.99□□□□□ -1.45
CPNE3-209ENST00000620393 C11orf52Q96A22 123 aa5.99□□□□□ -1.45
CPNE3-209ENST00000620393 RPUSD4Q96CM3 377 aaKnown RBP5.99□□□□□ -1.45
CPNE3-209ENST00000620393 GPR61Q9BZJ8 451 aa5.99□□□□□ -1.45
CPNE3-209ENST00000620393 STAB1Q9NY15 2570 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 SERTM2A0A1B0GWG4 89 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 TMEM218A2RU14 115 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 PRAC2D3DTV9 90 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 PEX7O00628 323 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 S100A9P06702 114 aaKnown RBP5.98□□□□□ -1.45
CPNE3-209ENST00000620393 ZNF688P0C7X2 276 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 DEFB131AP59861 70 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 GNG5P63218 68 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 PSMG4Q5JS54 123 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 CYB561D1Q8N8Q1 229 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 ZNF738Q8NE65 137 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 C2CD4CQ8TF44 421 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 LINC00479Q96M42 142 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 CITED4Q96RK1 184 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 ATG101Q9BSB4 218 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 KLF12Q9Y4X4 402 aa5.98□□□□□ -1.45
CPNE3-209ENST00000620393 TRAV34A0A0B4J273 112 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 RBAKDNA6NC62 111 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 FBLL1A6NHQ2 334 aaKnown RBP5.97□□□□□ -1.45
CPNE3-209ENST00000620393 K7EQM0 130 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 PRB4P10163 310 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-209ENST00000620393 TAS2R60P59551 318 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 TMEM183BQ1AE95 376 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 FAM74A3Q4VXF1 159 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 SOHLH1Q5JUK2 328 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 C9orf47Q6ZRZ4 202 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 GOLT1AQ6ZVE7 132 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 OR8A1Q8NGG7 326 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 LINC00477Q96M19 166 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 FAM110AQ9BQ89 295 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 AGPAT4-IT1Q9H0P7 198 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 RPH3ALQ9UNE2 315 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 NOTCH3Q9UM47 2321 aa5.97□□□□□ -1.45
CPNE3-209ENST00000620393 IGKV2-40A0A087WW87 121 aaPredicted RBP5.96□□□□□ -1.46
CPNE3-209ENST00000620393 TRBV6-1A0A0K0K1D8 114 aa5.96□□□□□ -1.46
CPNE3-209ENST00000620393 OR11H12B2RN74 326 aa5.96□□□□□ -1.46
CPNE3-209ENST00000620393 IGKV2D-40P01614 121 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms