RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 DSCAMO60469 2012 aa12.6□□□□□ -0.39
SEMA3B-214ENST00000619119 C12orf74Q32Q52 190 aa12.6□□□□□ -0.39
SEMA3B-214ENST00000619119 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
SEMA3B-214ENST00000619119 PRR7Q8TB68 274 aa12.6□□□□□ -0.39
SEMA3B-214ENST00000619119 LRBAP50851 2863 aa12.59□□□□□ -0.39
SEMA3B-214ENST00000619119 TRBV25-1A0A075B6N4 114 aa12.59□□□□□ -0.39
SEMA3B-214ENST00000619119 A4D1N5 150 aa12.59□□□□□ -0.39
SEMA3B-214ENST00000619119 IFI27L1Q96BM0 104 aa12.59□□□□□ -0.39
SEMA3B-214ENST00000619119 ANKHD1Q8IWZ3 2542 aaKnown RBP12.59□□□□□ -0.39
SEMA3B-214ENST00000619119 NHLRC4P0CG21 123 aaPredicted RBP12.59□□□□□ -0.39
SEMA3B-214ENST00000619119 FAM90A9PA6NNJ1 464 aa12.59□□□□□ -0.39
SEMA3B-214ENST00000619119 RPL39P5Q59GN2 51 aa12.59□□□□□ -0.39
SEMA3B-214ENST00000619119 KIR2DL4Q99706 377 aa12.59□□□□□ -0.39
SEMA3B-214ENST00000619119 H3BTX0 84 aa12.58□□□□□ -0.4
SEMA3B-214ENST00000619119 ARMS2P0C7Q2 107 aa12.58□□□□□ -0.4
SEMA3B-214ENST00000619119 COL8A1P27658 744 aa12.58□□□□□ -0.4
SEMA3B-214ENST00000619119 ADIPOQQ15848 244 aa12.58□□□□□ -0.4
SEMA3B-214ENST00000619119 ZNF562Q6V9R5 426 aa12.58□□□□□ -0.4
SEMA3B-214ENST00000619119 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
SEMA3B-214ENST00000619119 YAE1D1Q9NRH1 226 aa12.58□□□□□ -0.4
SEMA3B-214ENST00000619119 GNG12Q9UBI6 72 aa12.58□□□□□ -0.4
SEMA3B-214ENST00000619119 CCL13Q99616 98 aa12.58□□□□□ -0.4
SEMA3B-214ENST00000619119 PROP1O75360 226 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 C3orf36Q3SXR2 165 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 FAM90A1Q86YD7 464 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 RNF7Q9UBF6 113 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 PGPA6NDG6 321 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 SPINT2O43291 252 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 RBP4P02753 201 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 GRNP28799 593 aaKnown RBP12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 SMCPP49901 116 aaPredicted RBP12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 UTF1Q5T230 341 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 LINC01560Q8TB33 94 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 PRSS22Q9GZN4 317 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 COX7A2P2O60397 106 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 PRB4P10163 310 aaPredicted RBP12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 PRTN3P24158 256 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 GTSCR1Q86UQ5 136 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 FAM216BQ8N7L0 139 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 HIGD1BQ9P298 99 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 EPDR1Q9UM22 224 aa12.57□□□□□ -0.4
SEMA3B-214ENST00000619119 GAGE12JA6NER3 117 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 GAGE7O76087 117 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 GAGE12FP0CL80 117 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 GAGE12GP0CL81 117 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 GAGE12IP0CL82 117 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 UCNP55089 124 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 GAGE4Q13068 117 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 DIAPH2-AS1Q14236 149 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 Q71RC1 249 aaPredicted RBP12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 TMSB15BA0A087X1C1 80 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 LHBP01229 141 aa12.56□□□□□ -0.4
SEMA3B-214ENST00000619119 LINC01548A6NM66 108 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 C15orf65H3BRN8 121 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 CCL21O00585 134 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 OR5AN1Q8NGI8 311 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 VKORC1Q9BQB6 163 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 C15orf61A6NNL5 157 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 HAX1O00165 279 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 HBDP02042 147 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 LY6DQ14210 128 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 NUP37Q8NFH4 326 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 PPP1R35Q8TAP8 253 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 S1PR3Q99500 378 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 A0A1B0GUT8 65 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 C19orf71A6NCJ1 209 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 D6R8Y8 96 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 CT83Q5H943 113 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 CIARTQ8N365 385 aaPredicted RBP12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 CCL17Q92583 94 aa12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 FLYWCH2Q96CP2 140 aaKnown RBP12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 MRPL32Q9BYC8 188 aaKnown RBP12.55□□□□□ -0.4
SEMA3B-214ENST00000619119 IGHV3-48P01763 117 aa12.54□□□□□ -0.4
SEMA3B-214ENST00000619119 HSPE1P61604 102 aaKnown RBP12.54□□□□□ -0.4
SEMA3B-214ENST00000619119 PDPNQ86YL7 162 aa12.54□□□□□ -0.4
SEMA3B-214ENST00000619119 ITPR1Q14643 2758 aa12.54□□□□□ -0.4
SEMA3B-214ENST00000619119 TRAV8-1A0A0A6YYK1 113 aa12.54□□□□□ -0.4
SEMA3B-214ENST00000619119 NDUFS7O75251 213 aa12.54□□□□□ -0.4
SEMA3B-214ENST00000619119 ATP5J2P56134 94 aa12.54□□□□□ -0.4
SEMA3B-214ENST00000619119 ASCL2Q99929 193 aa12.54□□□□□ -0.4
SEMA3B-214ENST00000619119 SRRM4A7MD48 611 aaKnown RBP12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 C17orf100A8MU93 164 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 KLRB1Q12918 225 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 CDSNQ15517 529 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 CFAP126Q5VTH2 177 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 MLST8Q9BVC4 326 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 FABP5P3A8MUU1 101 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 GATA4P43694 442 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 C10orf113Q5VZT2 155 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 SRSF12Q8WXF0 261 aaKnown RBP12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 FXYD5Q96DB9 178 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 SPXQ9BT56 116 aa12.53□□□□□ -0.4
SEMA3B-214ENST00000619119 SPTAN1Q13813 2472 aaKnown RBP12.52□□□□□ -0.4
SEMA3B-214ENST00000619119 ZNF134P52741 427 aa12.52□□□□□ -0.41
SEMA3B-214ENST00000619119 ATP6V0E2Q8NHE4 81 aa12.52□□□□□ -0.41
SEMA3B-214ENST00000619119 GFRA4Q9GZZ7 299 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms