RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 C1orf195Q5TG92 126 aa12.34□□□□□ -0.43
COL5A1-208ENST00000618395 TTTY12Q9BZ98 90 aa12.34□□□□□ -0.43
COL5A1-208ENST00000618395 YPEL3P61236 119 aaPredicted RBP12.34□□□□□ -0.43
COL5A1-208ENST00000618395 DPM3Q9P2X0 92 aa12.34□□□□□ -0.43
COL5A1-208ENST00000618395 NDUFC2-KCTD14E9PQ53 114 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 PTH2Q96A98 100 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 WFDC2Q14508 124 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 HAX1O00165 279 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 J3QRE1 110 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 MPLKIPQ8TAP9 179 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 NRTNQ99748 197 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 ARMS2P0C7Q2 107 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 MST1LQ2TV78 715 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 Q8N8P6 123 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 COL5A3P25940 1745 aaPredicted RBP12.33□□□□□ -0.44
COL5A1-208ENST00000618395 LYPD6BQ8NI32 183 aa12.33□□□□□ -0.44
COL5A1-208ENST00000618395 TET2Q6N021 2002 aaPredicted RBP12.33□□□□□ -0.44
COL5A1-208ENST00000618395 TRAV12-2A0A075B6T6 113 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 LY6EQ16553 131 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 PEBP1P30086 187 aaKnown RBP12.32□□□□□ -0.44
COL5A1-208ENST00000618395 DEFB124Q8NES8 71 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 ZNF329Q86UD4 541 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 TIMM23O14925 209 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 CFC1BP0CG36 223 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 CFC1P0CG37 223 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 IL17RELQ6ZVW7 336 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 PCNX3Q9H6A9 2034 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 LINC00477Q96M19 166 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 LINC00312Q9Y6C7 94 aa12.32□□□□□ -0.44
COL5A1-208ENST00000618395 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
COL5A1-208ENST00000618395 RCHY1Q96PM5 261 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 C22orf46C9J442 243 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 RHODO00212 210 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 PRB2P02812 416 aaPredicted RBP12.31□□□□□ -0.44
COL5A1-208ENST00000618395 ZNF493Q6ZR52 646 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 C1orf210Q8IVY1 113 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 TMEM75Q8N9X5 138 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 MRPL35Q9NZE8 188 aaKnown RBP12.31□□□□□ -0.44
COL5A1-208ENST00000618395 PRR33A8MZF0 331 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 NBR2O15453 112 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 DEFB104AQ8WTQ1 72 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 PAPPAQ13219 1627 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 IGKV3D-7A0A0C4DH55 119 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
COL5A1-208ENST00000618395 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 PAPPA2Q9BXP8 1791 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 IGKV1-8A0A0C4DH67 115 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 SCRT2Q9NQ03 307 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 NDUFS5O43920 106 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 EFEMP2O95967 443 aa12.31□□□□□ -0.44
COL5A1-208ENST00000618395 A0A0A6YYD4 124 aa12.3□□□□□ -0.44
COL5A1-208ENST00000618395 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
COL5A1-208ENST00000618395 TRPT1Q86TN4 253 aaKnown RBP12.3□□□□□ -0.44
COL5A1-208ENST00000618395 CR1LQ2VPA4 569 aa12.3□□□□□ -0.44
COL5A1-208ENST00000618395 Q6ZUT4 128 aa12.3□□□□□ -0.44
COL5A1-208ENST00000618395 NUP210Q8TEM1 1887 aaPredicted RBP12.3□□□□□ -0.44
COL5A1-208ENST00000618395 C2orf66Q6UXQ4 117 aa12.3□□□□□ -0.44
COL5A1-208ENST00000618395 FOXS1O43638 330 aa12.3□□□□□ -0.44
COL5A1-208ENST00000618395 M0R1W7 72 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 CRYGBP07316 175 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 HGFACQ04756 655 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 CXCL10P02778 98 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 C8orf31Q8N9H6 132 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 NDUFA12Q9UI09 145 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 CCL21O00585 134 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 LINC01565O15544 149 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 J3QQQ9 107 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 HS3ST6Q96QI5 342 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 PDE6HQ13956 83 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 Q6ZS52 159 aa12.29□□□□□ -0.44
COL5A1-208ENST00000618395 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
COL5A1-208ENST00000618395 IGHV1OR15-9A0A0B4J2B8 117 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 IGLL5B9A064 214 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 HTN3P15516 51 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 MRPS18CQ9Y3D5 142 aaKnown RBP12.28□□□□□ -0.44
COL5A1-208ENST00000618395 ZNF492Q9P255 531 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 C14orf132Q9NPU4 83 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 PDLIM4P50479 330 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 FHL5Q5TD97 284 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 Q86TA4 180 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 IGFBPL1Q8WX77 278 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 TANC1Q9C0D5 1861 aa12.28□□□□□ -0.44
COL5A1-208ENST00000618395 ZFP2Q6ZN57 461 aa12.27□□□□□ -0.44
COL5A1-208ENST00000618395 PAQR4Q8N4S7 273 aaPredicted RBP12.27□□□□□ -0.44
COL5A1-208ENST00000618395 TMEM133Q9H2Q1 129 aa12.27□□□□□ -0.44
COL5A1-208ENST00000618395 V9GYV3 84 aa12.27□□□□□ -0.44
COL5A1-208ENST00000618395 CISD3P0C7P0 127 aa12.27□□□□□ -0.45
COL5A1-208ENST00000618395 NRN1LQ496H8 165 aa12.27□□□□□ -0.45
COL5A1-208ENST00000618395 UNQ6494/PRO21346Q6UXR6 183 aa12.27□□□□□ -0.45
COL5A1-208ENST00000618395 GFI1Q99684 422 aa12.27□□□□□ -0.45
COL5A1-208ENST00000618395 PF4P02776 101 aa12.27□□□□□ -0.45
COL5A1-208ENST00000618395 MRPL51Q4U2R6 128 aaKnown RBP12.27□□□□□ -0.45
COL5A1-208ENST00000618395 ZIC4Q8N9L1 334 aa12.27□□□□□ -0.45
COL5A1-208ENST00000618395 RPL15P61313 204 aaKnown RBP12.26□□□□□ -0.45
COL5A1-208ENST00000618395 PAX8Q06710 450 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 ANKRD39Q53RE8 183 aa12.26□□□□□ -0.45
COL5A1-208ENST00000618395 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms