RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 DNAH1Q9P2D7 4330 aa17.97■□□□□ 0.47
PMS1-220ENST00000618056 ALMS1Q8TCU4 4167 aa17.96■□□□□ 0.47
PMS1-220ENST00000618056 SMIM9A6NGZ8 99 aa17.96■□□□□ 0.47
PMS1-220ENST00000618056 SLC17A3O00476 420 aa17.96■□□□□ 0.47
PMS1-220ENST00000618056 SNRPCP09234 159 aaKnown RBP17.96■□□□□ 0.47
PMS1-220ENST00000618056 NANOS2P60321 138 aaKnown RBP17.96■□□□□ 0.47
PMS1-220ENST00000618056 GCSAMLQ5JQS6 135 aa17.96■□□□□ 0.47
PMS1-220ENST00000618056 CLLU1Q5K131 121 aa17.96■□□□□ 0.47
PMS1-220ENST00000618056 PHLDA1Q8WV24 401 aaPredicted RBP17.96■□□□□ 0.47
PMS1-220ENST00000618056 AMBPP02760 352 aa17.95■□□□□ 0.46
PMS1-220ENST00000618056 ALKAL2Q6UX46 152 aa17.95■□□□□ 0.46
PMS1-220ENST00000618056 RPUSD4Q96CM3 377 aaKnown RBP17.95■□□□□ 0.46
PMS1-220ENST00000618056 C17orf112F2Z3M2 114 aa17.95■□□□□ 0.46
PMS1-220ENST00000618056 ZNF253O75346 499 aa17.95■□□□□ 0.46
PMS1-220ENST00000618056 JTBO76095 146 aa17.95■□□□□ 0.46
PMS1-220ENST00000618056 STOML3Q8TAV4 291 aa17.95■□□□□ 0.46
PMS1-220ENST00000618056 KLK5Q9Y337 293 aaPredicted RBP17.95■□□□□ 0.46
PMS1-220ENST00000618056 H3BTX0 84 aa17.94■□□□□ 0.46
PMS1-220ENST00000618056 TAAR5O14804 337 aa17.94■□□□□ 0.46
PMS1-220ENST00000618056 HIST1H1AQ02539 215 aaPredicted RBP17.94■□□□□ 0.46
PMS1-220ENST00000618056 PHYHIPLQ96FC7 376 aa17.94■□□□□ 0.46
PMS1-220ENST00000618056 IGF2BP2-AS1Q96M15 143 aa17.94■□□□□ 0.46
PMS1-220ENST00000618056 PARD6GQ9BYG4 376 aaPredicted RBP17.94■□□□□ 0.46
PMS1-220ENST00000618056 ZNF586Q9NXT0 402 aa17.94■□□□□ 0.46
PMS1-220ENST00000618056 GOLT1BQ9Y3E0 138 aa17.94■□□□□ 0.46
PMS1-220ENST00000618056 TPT1P13693 172 aaKnown RBP17.93■□□□□ 0.46
PMS1-220ENST00000618056 C1orf158Q8N1D5 194 aa17.93■□□□□ 0.46
PMS1-220ENST00000618056 IFNA5P01569 189 aa17.92■□□□□ 0.46
PMS1-220ENST00000618056 HIST1H1EP10412 219 aaKnown RBP17.92■□□□□ 0.46
PMS1-220ENST00000618056 S100A1P23297 94 aa17.92■□□□□ 0.46
PMS1-220ENST00000618056 MRPL32Q9BYC8 188 aaKnown RBP17.92■□□□□ 0.46
PMS1-220ENST00000618056 SMIM3Q9BZL3 60 aa17.92■□□□□ 0.46
PMS1-220ENST00000618056 TRBV19A0A075B6N1 114 aa17.91■□□□□ 0.46
PMS1-220ENST00000618056 EIF5AP63241 154 aaKnown RBP17.91■□□□□ 0.46
PMS1-220ENST00000618056 PDE6HQ13956 83 aa17.91■□□□□ 0.46
PMS1-220ENST00000618056 SPINK13Q1W4C9 94 aa17.91■□□□□ 0.46
PMS1-220ENST00000618056 IGHV3OR16-12A0A075B7B8 117 aa17.9■□□□□ 0.46
PMS1-220ENST00000618056 LINC00862A6NCI5 91 aa17.9■□□□□ 0.46
PMS1-220ENST00000618056 M0R2Z0 102 aa17.9■□□□□ 0.46
PMS1-220ENST00000618056 CRXO43186 299 aaPredicted RBP17.9■□□□□ 0.46
PMS1-220ENST00000618056 SCGB1C1Q8TD33 95 aa17.9■□□□□ 0.46
PMS1-220ENST00000618056 FAM167A-AS1Q96KT0 104 aa17.9■□□□□ 0.46
PMS1-220ENST00000618056 SLC25A2Q9BXI2 301 aa17.9■□□□□ 0.46
PMS1-220ENST00000618056 CYTL1Q9NRR1 136 aa17.9■□□□□ 0.46
PMS1-220ENST00000618056 RFNGQ9Y644 331 aa17.9■□□□□ 0.46
PMS1-220ENST00000618056 TMEM189A5PLL7 270 aa17.89■□□□□ 0.45
PMS1-220ENST00000618056 INSP01308 110 aa17.89■□□□□ 0.45
PMS1-220ENST00000618056 MIR17HGQ75NE6 70 aa17.89■□□□□ 0.45
PMS1-220ENST00000618056 WFDC1Q9HC57 220 aa17.89■□□□□ 0.45
PMS1-220ENST00000618056 HYDINQ4G0P3 5121 aa17.89■□□□□ 0.45
PMS1-220ENST00000618056 PYYP10082 97 aa17.88■□□□□ 0.45
PMS1-220ENST00000618056 RHOBP62745 196 aa17.88■□□□□ 0.45
PMS1-220ENST00000618056 MRPL53Q96EL3 112 aaKnown RBP17.88■□□□□ 0.45
PMS1-220ENST00000618056 CELA1Q9UNI1 258 aa17.88■□□□□ 0.45
PMS1-220ENST00000618056 FUT9Q9Y231 359 aa17.88■□□□□ 0.45
PMS1-220ENST00000618056 C11orf94C9JXX5 98 aa17.88■□□□□ 0.45
PMS1-220ENST00000618056 NDUFB4O95168 129 aa17.88■□□□□ 0.45
PMS1-220ENST00000618056 BAP18Q8IXM2 172 aa17.88■□□□□ 0.45
PMS1-220ENST00000618056 PCNPQ8WW12 178 aaKnown RBP17.88■□□□□ 0.45
PMS1-220ENST00000618056 PPP1R14DQ9NXH3 145 aa17.88■□□□□ 0.45
PMS1-220ENST00000618056 PRAC2D3DTV9 90 aa17.87■□□□□ 0.45
PMS1-220ENST00000618056 HBE1P02100 147 aa17.87■□□□□ 0.45
PMS1-220ENST00000618056 FFAR4Q5NUL3 377 aa17.87■□□□□ 0.45
PMS1-220ENST00000618056 OR10J6PQ8NGY7 276 aa17.87■□□□□ 0.45
PMS1-220ENST00000618056 TMEM208Q9BTX3 173 aa17.87■□□□□ 0.45
PMS1-220ENST00000618056 NMBP08949 121 aa17.86■□□□□ 0.45
PMS1-220ENST00000618056 PRB4P10163 310 aaPredicted RBP17.86■□□□□ 0.45
PMS1-220ENST00000618056 PRELID1Q9Y255 219 aa17.86■□□□□ 0.45
PMS1-220ENST00000618056 TIMM9Q9Y5J7 89 aa17.86■□□□□ 0.45
PMS1-220ENST00000618056 RRN3P1Q2M238 152 aa17.85■□□□□ 0.45
PMS1-220ENST00000618056 Q6ZTC4 211 aa17.85■□□□□ 0.45
PMS1-220ENST00000618056 FAM210AQ96ND0 272 aa17.85■□□□□ 0.45
PMS1-220ENST00000618056 OR51M1Q9H341 326 aa17.85■□□□□ 0.45
PMS1-220ENST00000618056 TRAV12-2A0A075B6T6 113 aa17.84■□□□□ 0.45
PMS1-220ENST00000618056 BORCS7-ASMTA0A0B4J1R7 106 aa17.84■□□□□ 0.45
PMS1-220ENST00000618056 CDKN1BP46527 198 aa17.84■□□□□ 0.45
PMS1-220ENST00000618056 RPL7L1Q6DKI1 246 aaKnown RBP17.84■□□□□ 0.45
PMS1-220ENST00000618056 COMMD7Q86VX2 200 aa17.84■□□□□ 0.45
PMS1-220ENST00000618056 BLNKQ8WV28 456 aa17.84■□□□□ 0.45
PMS1-220ENST00000618056 LINC00476Q8WZB0 136 aa17.84■□□□□ 0.45
PMS1-220ENST00000618056 NBEAP1P0C6P0 100 aa17.83■□□□□ 0.45
PMS1-220ENST00000618056 C12orf74Q32Q52 190 aa17.83■□□□□ 0.45
PMS1-220ENST00000618056 FAM74A1Q5RGS3 127 aa17.83■□□□□ 0.45
PMS1-220ENST00000618056 EIF5AL1Q6IS14 154 aaKnown RBP17.83■□□□□ 0.45
PMS1-220ENST00000618056 TMEM256Q8N2U0 113 aa17.83■□□□□ 0.45
PMS1-220ENST00000618056 C2CD4CQ8TF44 421 aa17.83■□□□□ 0.45
PMS1-220ENST00000618056 FXYD5Q96DB9 178 aa17.83■□□□□ 0.45
PMS1-220ENST00000618056 PAXXQ9BUH6 204 aa17.83■□□□□ 0.45
PMS1-220ENST00000618056 LOC102723971A0A1B0GUV8 181 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 SPART-AS1P0CW21 52 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 ZNF266Q14584 549 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 ODF3Q96PU9 254 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 TRAV10A0A0B4J240 114 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 TEX48A0A1B0GUV7 120 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 NPIPB6E9PJ23 425 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 M0R3E3 92 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 EMP1P54849 157 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 RPP25LQ8N5L8 163 aaKnown RBP17.82■□□□□ 0.44
PMS1-220ENST00000618056 AAMDCQ9H7C9 122 aa17.82■□□□□ 0.44
PMS1-220ENST00000618056 DKK2Q9UBU2 259 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms