RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 KLF2Q9Y5W3 355 aaPredicted RBP8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 TMEM101Q96IK0 257 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 LINC00477Q96M19 166 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 CENPVL3A0A0U1RRI6 287 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 A8MXK9 166 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 E9PQ18 207 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 RNF166Q96A37 237 aaPredicted RBP8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 ZNF414Q96IQ9 312 aa8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 TNRC6AQ8NDV7 1962 aaKnown RBP8.08□□□□□ -1.12
SMARCA1-205ENST00000617310 MGAM2Q2M2H8 2515 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 A0A087WWL8 130 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 A0A087WX48 190 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 J3QLI3 93 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 TOMM40O96008 361 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 LGALS3P17931 250 aaKnown RBP8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 OR13C6PQ8NH95 151 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 RAB37Q96AX2 223 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 SMG1Q96Q15 3661 aaKnown RBP8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 TRAV12-2A0A075B6T6 113 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 RPLP1P05386 114 aaKnown RBP8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 FOLR2P14207 255 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 PAX9P55771 341 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 LINC00311Q8N616 119 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 C14orf178Q8N769 122 aaPredicted RBP8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 OR4C5Q8NGB2 326 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 TMEM70Q9BUB7 260 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 VPREB3Q9UKI3 123 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 TMEM131Q92545 1883 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 LINC01619G3V211 115 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 M0R143 59 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 C8orf86Q6ZUL3 223 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
SMARCA1-205ENST00000617310 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 RPL24P83731 157 aaKnown RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 ASPHD1Q5U4P2 390 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 CARHSP1Q9Y2V2 147 aaKnown RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 ARHGAP21Q5T5U3 1957 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 IZUMO1RA6ND01 250 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 FGF16O43320 207 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 FOSL1P15407 271 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 HAPLN4Q86UW8 402 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 WFDC11Q8NEX6 87 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 MRAP2Q96G30 205 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 SHANK2-AS3Q9BTD1 123 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 KLK9Q9UKQ9 250 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 LHBP01229 141 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 SPATA45Q537H7 98 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 PAPPA-AS1Q5QFB9 102 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 OR11H2Q8NH07 326 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 VPS25Q9BRG1 176 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 PSG3Q16557 428 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 LYZL1Q6UWQ5 148 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 BCL6BQ8N143 479 aaPredicted RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 ZNF843Q8N446 348 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 PHLDA1Q8WV24 401 aaPredicted RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 RITA1Q96K30 269 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 FNDC4Q9H6D8 234 aaPredicted RBP8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 ST20Q9HBF5 79 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 OSTCQ9NRP0 149 aa8.06□□□□□ -1.12
SMARCA1-205ENST00000617310 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 LOC102724200A0A096LPH7 203 aaPredicted RBP8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 PMCHL1Q16048 86 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 ZNF876PQ49A33 203 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 Q6AWC8 147 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 LINC01551Q86U37 167 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 IGHV3-16A0A0C4DH30 117 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 SERF1AO75920 110 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 CFPP27918 469 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 GTF2H5Q6ZYL4 71 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 UBE2DNLQ8IWF7 75 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 IGHV3-64A0A075B6Q5 118 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 F6UB75 175 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 OR9G4Q8NGQ1 327 aa8.05□□□□□ -1.12
SMARCA1-205ENST00000617310 NDUFA3O95167 84 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 C14orf144Q96I85 54 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 SH2D1AO60880 128 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 MST1LQ2TV78 715 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 SOX21Q9Y651 276 aaPredicted RBP8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 SMKR1H3BMG3 65 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 SSBP2P81877 361 aaPredicted RBP8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 COTL1Q14019 142 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 DAZAP2Q15038 168 aaPredicted RBP8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 NCOR1P1Q9H4R4 102 aa8.04□□□□□ -1.12
SMARCA1-205ENST00000617310 TRBV9A0A0B4J1U6 114 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 HLA-DMBP28068 263 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 VCX2Q9H322 139 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 INSP01308 110 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 SMIM6P0DI80 62 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 TSKUQ8WUA8 353 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 C11orf68Q9H3H3 251 aaKnown RBP8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 ARMS2P0C7Q2 107 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 ADMP35318 185 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 FBXL19-AS1Q494R0 122 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 DTX2Q86UW9 622 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 IGLC1P0CG04 106 aa8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 HOXD3P31249 432 aaPredicted RBP8.03□□□□□ -1.12
SMARCA1-205ENST00000617310 RELNP78509 3460 aa8.02□□□□□ -1.13
SMARCA1-205ENST00000617310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms