RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 FTH1P19P0C7X4 201 aa10.46□□□□□ -0.73
MSH6-214ENST00000616033 UFSP1Q6NVU6 142 aa10.46□□□□□ -0.73
MSH6-214ENST00000616033 DEFB104AQ8WTQ1 72 aa10.46□□□□□ -0.73
MSH6-214ENST00000616033 GLMPQ8WWB7 406 aa10.46□□□□□ -0.73
MSH6-214ENST00000616033 SPAG8Q99932 426 aaPredicted RBP10.46□□□□□ -0.73
MSH6-214ENST00000616033 RASL11BQ9BPW5 248 aa10.46□□□□□ -0.73
MSH6-214ENST00000616033 POU2AF1Q16633 256 aa10.46□□□□□ -0.73
MSH6-214ENST00000616033 TMEM200BQ69YZ2 307 aa10.46□□□□□ -0.73
MSH6-214ENST00000616033 IFI27L1Q96BM0 104 aa10.46□□□□□ -0.73
MSH6-214ENST00000616033 UFC1Q9Y3C8 167 aa10.46□□□□□ -0.73
MSH6-214ENST00000616033 H3BRM9 83 aa10.46□□□□□ -0.74
MSH6-214ENST00000616033 GP9P14770 177 aa10.46□□□□□ -0.74
MSH6-214ENST00000616033 NEGR1Q7Z3B1 354 aa10.46□□□□□ -0.74
MSH6-214ENST00000616033 SLC25A39Q9BZJ4 359 aaPredicted RBP10.46□□□□□ -0.74
MSH6-214ENST00000616033 PSG8Q9UQ74 426 aa10.46□□□□□ -0.74
MSH6-214ENST00000616033 INSIG2Q9Y5U4 225 aa10.46□□□□□ -0.74
MSH6-214ENST00000616033 ZNF292O60281 2723 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 TRBV20-1A0A075B6N2 111 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 NPIPB5A8MRT5 1133 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 GAS8-AS1O95177 125 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 MYCNOSP40205 109 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 MSRB1Q9NZV6 116 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 IGKV2-40A0A087WW87 121 aaPredicted RBP10.45□□□□□ -0.74
MSH6-214ENST00000616033 FSTL3O95633 263 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 IGKV2D-40P01614 121 aaPredicted RBP10.45□□□□□ -0.74
MSH6-214ENST00000616033 SMIM13P0DJ93 91 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 PLA2G2CQ5R387 149 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 ZNF418Q8TF45 676 aaPredicted RBP10.45□□□□□ -0.74
MSH6-214ENST00000616033 TMEM160Q9NX00 188 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 SLC25A15Q9Y619 301 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 MAP1AP78559 2803 aaPredicted RBP10.45□□□□□ -0.74
MSH6-214ENST00000616033 IGKV2D-26A0A0A0MRZ7 120 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 FAM90A27PA6NNH2 459 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 MT-ATP8P03928 68 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 IL4P05112 153 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 ANAPC13Q9BS18 74 aa10.45□□□□□ -0.74
MSH6-214ENST00000616033 RELNP78509 3460 aa10.44□□□□□ -0.74
MSH6-214ENST00000616033 TMEM189A5PLL7 270 aa10.44□□□□□ -0.74
MSH6-214ENST00000616033 COL6A6A6NMZ7 2263 aa10.44□□□□□ -0.74
MSH6-214ENST00000616033 HAX1O00165 279 aa10.44□□□□□ -0.74
MSH6-214ENST00000616033 NPYP01303 97 aa10.44□□□□□ -0.74
MSH6-214ENST00000616033 ORM1P02763 201 aa10.44□□□□□ -0.74
MSH6-214ENST00000616033 GATA1P15976 413 aaPredicted RBP10.44□□□□□ -0.74
MSH6-214ENST00000616033 SYT8Q8NBV8 401 aa10.44□□□□□ -0.74
MSH6-214ENST00000616033 SIVA1O15304 175 aa10.44□□□□□ -0.74
MSH6-214ENST00000616033 RPS20P60866 119 aaKnown RBP10.44□□□□□ -0.74
MSH6-214ENST00000616033 KLF12Q9Y4X4 402 aa10.44□□□□□ -0.74
MSH6-214ENST00000616033 A0A096LNJ9 63 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 LHBP01229 141 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 FGF6P10767 208 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 APOBEC3AP31941 199 aaPredicted RBP10.43□□□□□ -0.74
MSH6-214ENST00000616033 C3orf36Q3SXR2 165 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 C8orf46Q8TAG6 207 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 TMEM167AQ8TBQ9 72 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 KLK15Q9H2R5 256 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 IGHV3OR16-13A0A075B7E8 117 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 IGHV3-74A0A0B4J1X5 117 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 GLRXP35754 106 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 CRIP1P50238 77 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 CR1LQ2VPA4 569 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 DEFB109BQ30KR1 87 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 ZNF474Q6S9Z5 364 aaPredicted RBP10.43□□□□□ -0.74
MSH6-214ENST00000616033 ORMDL3Q8N138 153 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 MRAP2Q96G30 205 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 SOX21Q9Y651 276 aaPredicted RBP10.43□□□□□ -0.74
MSH6-214ENST00000616033 PRR33A8MZF0 331 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 FOXC2Q99958 501 aa10.43□□□□□ -0.74
MSH6-214ENST00000616033 HBDP02042 147 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 MRPL51Q4U2R6 128 aaKnown RBP10.42□□□□□ -0.74
MSH6-214ENST00000616033 PTH2Q96A98 100 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 LYNX1G3V0Z9 82 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 IGLV1-44P01699 117 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 LYNX1P0DP58 116 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 LEPP41159 167 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 ANKRD11Q6UB99 2663 aaPredicted RBP10.42□□□□□ -0.74
MSH6-214ENST00000616033 ZNF883P0CG24 379 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 C1orf122Q6ZSJ8 110 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 ZNF833PQ6ZTB9 187 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 OTORQ9NRC9 128 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 ZNF492Q9P255 531 aa10.42□□□□□ -0.74
MSH6-214ENST00000616033 H3BVH4 76 aa10.41□□□□□ -0.74
MSH6-214ENST00000616033 J3KRW8 73 aa10.41□□□□□ -0.74
MSH6-214ENST00000616033 NDUFB3O43676 98 aa10.41□□□□□ -0.74
MSH6-214ENST00000616033 HLA-DMBP28068 263 aa10.41□□□□□ -0.74
MSH6-214ENST00000616033 SPRY4Q9C004 299 aa10.41□□□□□ -0.74
MSH6-214ENST00000616033 LINC00312Q9Y6C7 94 aa10.41□□□□□ -0.74
MSH6-214ENST00000616033 ZNF785A8K8V0 405 aa10.41□□□□□ -0.74
MSH6-214ENST00000616033 IGLV2-11P01706 119 aa10.41□□□□□ -0.74
MSH6-214ENST00000616033 THAP8Q8NA92 274 aa10.41□□□□□ -0.74
MSH6-214ENST00000616033 NDUFS7O75251 213 aa10.4□□□□□ -0.74
MSH6-214ENST00000616033 NGBQ9NPG2 151 aa10.4□□□□□ -0.74
MSH6-214ENST00000616033 ID1P41134 155 aa10.4□□□□□ -0.74
MSH6-214ENST00000616033 HES1Q14469 280 aa10.4□□□□□ -0.74
MSH6-214ENST00000616033 CT83Q5H943 113 aa10.4□□□□□ -0.74
MSH6-214ENST00000616033 GFRA4Q9GZZ7 299 aa10.4□□□□□ -0.74
MSH6-214ENST00000616033 IGHV3-66A0A0C4DH42 116 aa10.4□□□□□ -0.75
MSH6-214ENST00000616033 SPRY2O43597 315 aa10.4□□□□□ -0.75
MSH6-214ENST00000616033 IGLV2-23P01705 113 aa10.4□□□□□ -0.75
MSH6-214ENST00000616033 ZC2HC1BQ5TFG8 222 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms