RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 LYPD1Q8N2G4 141 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 OR8A1Q8NGG7 326 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 OR10J6PQ8NGY7 276 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 STOML3Q8TAV4 291 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 TP53TG1Q9Y2A0 90 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 U3KQK5 164 aa9.75□□□□□ -0.85
MDC1-209ENST00000613547 CTXND1A0A1B0GTU2 59 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 SPRY2O43597 315 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 EIF3GO75821 320 aaKnown RBP eCLIP9.74□□□□□ -0.85
MDC1-209ENST00000613547 NDUFB4O95168 129 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 CNN1P51911 297 aaKnown RBP9.74□□□□□ -0.85
MDC1-209ENST00000613547 ICAM4Q14773 271 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 DEFB135Q30KP9 77 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 SLC51BQ86UW2 128 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 C9orf62Q8N4C0 152 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 ZNF503Q96F45 646 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 RCHY1Q96PM5 261 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 TMEM167BQ9NRX6 74 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 PPP1R14DQ9NXH3 145 aa9.74□□□□□ -0.85
MDC1-209ENST00000613547 TGP01266 2768 aa9.73□□□□□ -0.85
MDC1-209ENST00000613547 CSN1S1P47710 185 aa9.73□□□□□ -0.85
MDC1-209ENST00000613547 RANP62826 216 aaKnown RBP9.73□□□□□ -0.85
MDC1-209ENST00000613547 DPPA3Q6W0C5 159 aa9.73□□□□□ -0.85
MDC1-209ENST00000613547 IQCF2Q8IXL9 164 aa9.73□□□□□ -0.85
MDC1-209ENST00000613547 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
MDC1-209ENST00000613547 TMED6Q8WW62 240 aa9.73□□□□□ -0.85
MDC1-209ENST00000613547 PHYHIPLQ96FC7 376 aa9.73□□□□□ -0.85
MDC1-209ENST00000613547 ZNF705FA8MVS1 300 aaPredicted RBP9.72□□□□□ -0.85
MDC1-209ENST00000613547 AMBPP02760 352 aa9.72□□□□□ -0.85
MDC1-209ENST00000613547 ZNF705DP0CH99 300 aaPredicted RBP9.72□□□□□ -0.85
MDC1-209ENST00000613547 ZNF705BP0CI00 300 aaPredicted RBP9.72□□□□□ -0.85
MDC1-209ENST00000613547 GCHFRP30047 84 aa9.72□□□□□ -0.85
MDC1-209ENST00000613547 CMTM2Q8TAZ6 248 aa9.72□□□□□ -0.85
MDC1-209ENST00000613547 FAM213BQ8TBF2 198 aa9.72□□□□□ -0.85
MDC1-209ENST00000613547 RXFP4Q8TDU9 374 aa9.72□□□□□ -0.85
MDC1-209ENST00000613547 RNF183Q96D59 192 aa9.72□□□□□ -0.85
MDC1-209ENST00000613547 Q9H3A6 140 aa9.72□□□□□ -0.85
MDC1-209ENST00000613547 RETNQ9HD89 108 aa9.72□□□□□ -0.85
MDC1-209ENST00000613547 MAP1LC3B2A6NCE7 125 aa9.71□□□□□ -0.86
MDC1-209ENST00000613547 M0R3E3 92 aa9.71□□□□□ -0.86
MDC1-209ENST00000613547 RAB5CP51148 216 aa9.71□□□□□ -0.86
MDC1-209ENST00000613547 ZNF726P1Q15940 193 aa9.71□□□□□ -0.86
MDC1-209ENST00000613547 OVOL2Q9BRP0 275 aa9.71□□□□□ -0.86
MDC1-209ENST00000613547 MAP1LC3BQ9GZQ8 125 aa9.71□□□□□ -0.86
MDC1-209ENST00000613547 A8MTW9 85 aa9.7□□□□□ -0.86
MDC1-209ENST00000613547 BOLA2-SMG1P6H3BVE0 249 aa9.7□□□□□ -0.86
MDC1-209ENST00000613547 SSX7Q7RTT5 188 aa9.7□□□□□ -0.86
MDC1-209ENST00000613547 SLC35B3Q9H1N7 401 aa9.7□□□□□ -0.86
MDC1-209ENST00000613547 OTORQ9NRC9 128 aa9.7□□□□□ -0.86
MDC1-209ENST00000613547 XCL2Q9UBD3 114 aa9.7□□□□□ -0.86
MDC1-209ENST00000613547 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 PGPA6NDG6 321 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 PRAC2D3DTV9 90 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 NPIPB6E9PJ23 425 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 TSPOP30536 169 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 FXYD7P58549 80 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 SUN5Q8TC36 379 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 SFT2D1Q8WV19 159 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 LINC00477Q96M19 166 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 RARRES2Q99969 163 aa9.69□□□□□ -0.86
MDC1-209ENST00000613547 TEX46H3BTG2 121 aa9.68□□□□□ -0.86
MDC1-209ENST00000613547 INSP01308 110 aa9.68□□□□□ -0.86
MDC1-209ENST00000613547 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
MDC1-209ENST00000613547 H2AFB1P0C5Y9 115 aa9.68□□□□□ -0.86
MDC1-209ENST00000613547 PRB4P10163 310 aaPredicted RBP9.68□□□□□ -0.86
MDC1-209ENST00000613547 FHITP49789 147 aa9.68□□□□□ -0.86
MDC1-209ENST00000613547 NKX2-5P52952 324 aaPredicted RBP9.68□□□□□ -0.86
MDC1-209ENST00000613547 FGF8P55075 233 aaPredicted RBP9.68□□□□□ -0.86
MDC1-209ENST00000613547 TMEM78Q5T7P6 136 aa9.68□□□□□ -0.86
MDC1-209ENST00000613547 ARL6IP6Q8N6S5 226 aa9.68□□□□□ -0.86
MDC1-209ENST00000613547 OR11H2Q8NH07 326 aa9.68□□□□□ -0.86
MDC1-209ENST00000613547 IGF2BP2-AS1Q96M15 143 aa9.68□□□□□ -0.86
MDC1-209ENST00000613547 GOLT1BQ9Y3E0 138 aa9.68□□□□□ -0.86
MDC1-209ENST00000613547 IGKV2-40A0A087WW87 121 aaPredicted RBP9.67□□□□□ -0.86
MDC1-209ENST00000613547 RBAKDNA6NC62 111 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 M0R2Z0 102 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 IGKV2D-40P01614 121 aaPredicted RBP9.67□□□□□ -0.86
MDC1-209ENST00000613547 SLC25A5P05141 298 aaKnown RBP9.67□□□□□ -0.86
MDC1-209ENST00000613547 LEPP41159 167 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 CDKN1BP46527 198 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 SPINK13Q1W4C9 94 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 C5orf17Q8NAS9 161 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 CSNK1G2-AS1Q8NCQ2 148 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 MBD3L1Q8WWY6 194 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 ODF3Q96PU9 254 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 RPH3ALQ9UNE2 315 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 NBEAL2Q6ZNJ1 2754 aa9.67□□□□□ -0.86
MDC1-209ENST00000613547 SERTM2A0A1B0GWG4 89 aa9.66□□□□□ -0.86
MDC1-209ENST00000613547 A0A1W2PRE2 83 aa9.66□□□□□ -0.86
MDC1-209ENST00000613547 K7EQM0 130 aa9.66□□□□□ -0.86
MDC1-209ENST00000613547 SULT1A2P50226 295 aa9.66□□□□□ -0.86
MDC1-209ENST00000613547 PPT1P50897 306 aa9.66□□□□□ -0.86
MDC1-209ENST00000613547 SUMO1P63165 101 aaKnown RBP9.66□□□□□ -0.86
MDC1-209ENST00000613547 C9orf47Q6ZRZ4 202 aa9.66□□□□□ -0.86
MDC1-209ENST00000613547 TMEM208Q9BTX3 173 aa9.66□□□□□ -0.86
MDC1-209ENST00000613547 NKX6-2Q9C056 277 aaPredicted RBP9.66□□□□□ -0.86
MDC1-209ENST00000613547 TMPRSS5Q9H3S3 457 aa9.66□□□□□ -0.86
MDC1-209ENST00000613547 PLA2G2EQ9NZK7 142 aa9.66□□□□□ -0.86
MDC1-209ENST00000613547 IGHV3OR16-12A0A075B7B8 117 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms