RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 KRTAP4-11Q9BYQ6 195 aa5.09□□□□□ -1.59
PTCHD3P1-201ENST00000612350 WDR61Q9GZS3 305 aaKnown RBP5.09□□□□□ -1.59
PTCHD3P1-201ENST00000612350 TNFSF18Q9UNG2 199 aa5.09□□□□□ -1.59
PTCHD3P1-201ENST00000612350 HIGD1AQ9Y241 93 aa5.09□□□□□ -1.59
PTCHD3P1-201ENST00000612350 VPS13BQ7Z7G8 4022 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 FXYD6-FXYD2A0A087WZ82 144 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 IGHV3-49A0A0A0MS15 119 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ZNF98A6NK75 572 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ZNF705EA8MWA4 302 aaPredicted RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 DNASE2O00115 360 aaPredicted RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 APOHP02749 345 aaPredicted RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 GIG44P09565 113 aaPredicted RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 OR5G3P0C626 314 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 RPL7P18124 248 aaKnown RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 BTF3P20290 206 aaKnown RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 GATA2P23769 480 aaPredicted RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 GALR1P47211 349 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 RPL11P62913 178 aaKnown RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ZNF345Q14585 488 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 Q5BKY6 102 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SIGLEC15Q6ZMC9 328 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 TMEM182Q6ZP80 229 aaPredicted RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 TCTE3Q8IZS6 198 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 OR8I2Q8N0Y5 310 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SHANK2-AS3Q9BTD1 123 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SLC25A39Q9BZJ4 359 aaPredicted RBP5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ARL6Q9H0F7 186 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ARV1Q9H2C2 271 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 MS4A6AQ9H2W1 248 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 DNAJC4Q9NNZ3 241 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 NRN1Q9NPD7 142 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SLC39A9Q9NUM3 307 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 TIMM9Q9Y5J7 89 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 X6R8D5 127 aa5.08□□□□□ -1.6
PTCHD3P1-201ENST00000612350 IGHV3OR16-13A0A075B7E8 117 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 BORCS7-ASMTA0A0B4J1R7 106 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 IGHV3-74A0A0B4J1X5 117 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 IGHV3-66A0A0C4DH42 116 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 A0A0D9SG52 128 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 RNF222A6NCQ9 220 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 NPIPB6E9PJ23 425 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 G3V3Q6 166 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 H3BRN7 92 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 COX7A2P2O60397 106 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 FAM3BP58499 235 aaPredicted RBP5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SNRPD3P62318 126 aaKnown RBP5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 C10orf113Q5VZT2 155 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 MIC13Q5XKP0 118 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 Q6ZSN1 163 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 LINC00305Q7Z4B0 112 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 FAM210BQ96KR6 192 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 PXMP4Q9Y6I8 212 aa5.07□□□□□ -1.6
PTCHD3P1-201ENST00000612350 K7EQG2 157 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ARPC5O15511 151 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 MBP02144 154 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 CXCL2P19875 107 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ID1P41134 155 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SERF2P84101 59 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ZFP69Q49AA0 526 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 PATE2Q6UY27 113 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 BPIFA4PQ86YQ2 179 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 STXBP6Q8NFX7 210 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 OR2G3Q8NGZ4 309 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ZNRF2Q8NHG8 242 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 DCANP1Q8TF63 244 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 TMEM37Q8WXS4 190 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 GNPNAT1Q96EK6 184 aaPredicted RBP5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ST6GAL2Q96JF0 529 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 PSMG3Q9BT73 122 aaPredicted RBP5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 MRPL32Q9BYC8 188 aaKnown RBP5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SMIM3Q9BZL3 60 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 WFDC1Q9HC57 220 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 CLEC5AQ9NY25 188 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 DOK5Q9P104 306 aa5.06□□□□□ -1.6
PTCHD3P1-201ENST00000612350 A0A087X0K7 114 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ISLRO14498 428 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 M6PRP20645 277 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 PSMB3P49720 205 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 KRTAP10-1P60331 282 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 EIF5AP63241 154 aaKnown RBP5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 GUK1Q16774 197 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ACOT6Q3I5F7 207 aaPredicted RBP5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 MORN3Q6PF18 240 aaPredicted RBP5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 GBGT1Q8N5D6 347 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 KCNRGQ8N5I3 272 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 HYLS1Q96M11 299 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 UHRF2Q96PU4 802 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ARPC5LQ9BPX5 153 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SLC25A32Q9H2D1 315 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SLC25A22Q9H936 323 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 TMEM14CQ9P0S9 112 aa5.05□□□□□ -1.6
PTCHD3P1-201ENST00000612350 IGKV3-7A0A075B6H7 116 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 KANTRA0A1W2PQU2 76 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 SOCS3O14543 225 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 ZNF253O75346 499 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 C1QBP02746 253 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 C4BPBP20851 252 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 FUSP35637 526 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 TFPI2P48307 235 aa5.04□□□□□ -1.6
PTCHD3P1-201ENST00000612350 TAS2R45P59539 299 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms