RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PYYP10082 97 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 TAS2R60P59551 318 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 RPEL1Q2QD12 228 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 COA6Q5JTJ3 125 aaKnown RBP6.75□□□□□ -1.33
SMAD4-217ENST00000611848 HIST3H2BBQ8N257 126 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 DLX4Q92988 240 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-217ENST00000611848 ATP6V0BQ99437 205 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 IL36BQ9NZH7 164 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 IGHV3-21A0A0B4J1V1 117 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 BMPR1BO00238 502 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 TRBV12-3P01733 135 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 ORM2P19652 201 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 INSL3P51460 131 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 TM4SF20Q53R12 229 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 KPRPQ5T749 579 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-217ENST00000611848 C9orf66Q5T8R8 295 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 OR1B1Q8NGR6 318 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 ZNF502Q8TBZ5 544 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 CCDC140Q96MF4 163 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 OSTCQ9NRP0 149 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 GAR1Q9NY12 217 aaKnown RBP6.74□□□□□ -1.33
SMAD4-217ENST00000611848 C21orf62Q9NYP8 219 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 V9GYV3 84 aa6.74□□□□□ -1.33
SMAD4-217ENST00000611848 ZNF320A2RRD8 509 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 ISLRO14498 428 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 WIPF1O43516 503 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 IGKV1-17P01599 117 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 IGHV3-23P01764 117 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 CLEC3BP05452 202 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 PSG1P11464 419 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 GP9P14770 177 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 ARL3P36405 182 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 YPEL3P61236 119 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-217ENST00000611848 KLF5Q13887 457 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-217ENST00000611848 BEAN1Q3B7T3 259 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 TIGITQ495A1 244 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 CLEC19AQ6UXS0 136 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 MRPL27Q9P0M9 148 aaKnown RBP6.73□□□□□ -1.33
SMAD4-217ENST00000611848 TMEM14CQ9P0S9 112 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 ZMAT5Q9UDW3 170 aaKnown RBP6.73□□□□□ -1.33
SMAD4-217ENST00000611848 DNAH3Q8TD57 4116 aa6.73□□□□□ -1.33
SMAD4-217ENST00000611848 PEX7O00628 323 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 FABP1P07148 127 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 NBEAP1P0C6P0 100 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 FCGR2BP31994 310 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-217ENST00000611848 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-217ENST00000611848 ERVFC1-1P60608 527 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 S100A12P80511 92 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 OR5I1Q13606 314 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 GFI1BQ5VTD9 330 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 GPHB5Q86YW7 130 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 TMEM183AQ8IXX5 376 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 TMEM190Q8WZ59 177 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 TXN2Q99757 166 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 HIGD1AQ9Y241 93 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 KLF12Q9Y4X4 402 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 S4R3C0 116 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 SLC17A3O00476 420 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 RD3LP0DJH9 198 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 S100A2P29034 98 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 GPR183P32249 361 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 CNN1P51911 297 aaKnown RBP6.72□□□□□ -1.33
SMAD4-217ENST00000611848 MFAP4P55083 255 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 SYNJ2BPP57105 145 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 EGFEM1PQ0D2K5 195 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 FAM106AQ4KMX7 169 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 Q56UQ5 140 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 FAM231DQ6ZW35 169 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 OR9G4Q8NGQ1 327 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 SLC25A39Q9BZJ4 359 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-217ENST00000611848 PEMTQ9UBM1 199 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 EPDR1Q9UM22 224 aa6.72□□□□□ -1.33
SMAD4-217ENST00000611848 TRAV30A0A087WSZ9 112 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 XKRY2A2RUG3 117 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 LGALS9O00182 355 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 SAP30O75446 220 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 TOMM40O96008 361 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 RANP62826 216 aaKnown RBP6.71□□□□□ -1.34
SMAD4-217ENST00000611848 DEFA6Q01524 100 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 TMEM183BQ1AE95 376 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 SMIM12Q96EX1 92 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 LINC00479Q96M42 142 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 SIGLEC8Q9NYZ4 499 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 TRAPPC1Q9Y5R8 145 aa6.71□□□□□ -1.34
SMAD4-217ENST00000611848 WI2-2373I1.2A0A1W2PRP0 233 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 SMIM27A0A1W2PRY6 76 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 PGPA6NDG6 321 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 OR2T8A6NH00 312 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 PCP4L1A6NKN8 68 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
SMAD4-217ENST00000611848 H3BRN7 92 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 HIST1H1EP10412 219 aaKnown RBP6.7□□□□□ -1.34
SMAD4-217ENST00000611848 LYZP61626 148 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 DNLZQ5SXM8 178 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 IBA57Q5T440 356 aaKnown RBP6.7□□□□□ -1.34
SMAD4-217ENST00000611848 ZNF600Q6ZNG1 722 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 C5orf17Q8NAS9 161 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 OR10D4PQ8NGN7 298 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 HIST1H2BLQ99880 126 aa6.7□□□□□ -1.34
SMAD4-217ENST00000611848 SHANK2-AS3Q9BTD1 123 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms