RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, human

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH13-223	ENST00000610356	TEX43	Q6ZNM6	134 aa		13.17	□□□□□ -0.3
RDH13-223	ENST00000610356	GRAMD2B	Q96HH9	432 aa		13.17	□□□□□ -0.3
RDH13-223	ENST00000610356	MLST8	Q9BVC4	326 aa		13.17	□□□□□ -0.3
RDH13-223	ENST00000610356	TRBV6-1	A0A0K0K1D8	114 aa		13.16	□□□□□ -0.3
RDH13-223	ENST00000610356	BUB3	O43684	328 aa		13.16	□□□□□ -0.3
RDH13-223	ENST00000610356	GPX1	P07203	203 aa		13.16	□□□□□ -0.3
RDH13-223	ENST00000610356	TMEM75	Q8N9X5	138 aa		13.16	□□□□□ -0.3
RDH13-223	ENST00000610356	WFDC11	Q8NEX6	87 aa		13.16	□□□□□ -0.3
RDH13-223	ENST00000610356	CSPG4	Q6UVK1	2322 aa		13.16	□□□□□ -0.3
RDH13-223	ENST00000610356	MAP1A	P78559	2803 aa	Predicted RBP	13.16	□□□□□ -0.3
RDH13-223	ENST00000610356	TENM4	Q6N022	2769 aa		13.16	□□□□□ -0.3
RDH13-223	ENST00000610356	TRAV8-1	A0A0A6YYK1	113 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	ZNF253	O75346	499 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	KLK15	Q9H2R5	256 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	SMAD5-AS1	Q9Y6J3	95 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.15	□□□□□ -0.3
RDH13-223	ENST00000610356		A0A0G2JLM5	398 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356		A0A1B0GV90	55 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356		F2Z2F3	143 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356		M0R3E3	92 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	IGLV2-11	P01706	119 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	CSN1S1	P47710	185 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	TCL1A	P56279	114 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	TMEM95	Q3KNT9	176 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	PRNT	Q86SH4	94 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	NUDT10	Q8NFP7	164 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	NUDT11	Q96G61	164 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	C20orf144	Q9BQM9	153 aa		13.15	□□□□□ -0.3
RDH13-223	ENST00000610356	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.14	□□□□□ -0.31
RDH13-223	ENST00000610356	DIRC3	C9JPN6	131 aa		13.14	□□□□□ -0.31
RDH13-223	ENST00000610356	ZNF705D	P0CH99	300 aa	Predicted RBP	13.14	□□□□□ -0.31
RDH13-223	ENST00000610356	ZNF705B	P0CI00	300 aa	Predicted RBP	13.14	□□□□□ -0.31
RDH13-223	ENST00000610356	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.14	□□□□□ -0.31
RDH13-223	ENST00000610356	CREBBP	Q92793	2442 aa		13.14	□□□□□ -0.31
RDH13-223	ENST00000610356	CELSR1	Q9NYQ6	3014 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356		A0A087X0K7	114 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	SERTM2	A0A1B0GWG4	89 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	SPINK4	O60575	86 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	IGHV3-11	P01762	117 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	APCS	P02743	223 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	PSG3	Q16557	428 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	SIGLECL1	Q8N7X8	197 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	SAMD10	Q9BYL1	202 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	ZNF492	Q9P255	531 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	APC	P25054	2843 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	ZNF785	A8K8V0	405 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	NDUFA4	O00483	81 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	TRBV12-3	P01733	135 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	MRPL54	Q6P161	138 aa	Known RBP	13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	ARL6IP6	Q8N6S5	226 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	OR4X2	Q8NGF9	303 aa		13.13	□□□□□ -0.31
RDH13-223	ENST00000610356	IGHV3-66	A0A0C4DH42	116 aa		13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	HOXA3	O43365	443 aa	Predicted RBP	13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	ZNF207	O43670	478 aa	Known RBP	13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	SLC35B1	P78383	322 aa		13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	MRPL52	Q86TS9	123 aa	Known RBP	13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	TEX29	Q8N6K0	151 aa		13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	TSKU	Q8WUA8	353 aa		13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	KCNS1	Q96KK3	526 aa		13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	PRSS22	Q9GZN4	317 aa		13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	PSG8	Q9UQ74	426 aa		13.12	□□□□□ -0.31
RDH13-223	ENST00000610356	ZFP30	Q9Y2G7	519 aa		13.12	□□□□□ -0.31
RDH13-223	ENST00000610356		U3KQE9	123 aa		13.12	□□□□□ -0.31
RDH13-223	ENST00000610356		A0A1W2PS18	150 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	CA1	P00915	261 aa	Predicted RBP	13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	IGHG4	P01861	327 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	LCNL1	Q6ZST4	164 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	CIART	Q8N365	385 aa	Predicted RBP	13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	NUP35	Q8NFH5	326 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	ZFHX3	Q15911	3703 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	SMAD7	O15105	426 aa	Known RBP	13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	APOH	P02749	345 aa	Predicted RBP	13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	CD33	P20138	364 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	SRI	P30626	198 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	KIAA1644	Q3SXP7	199 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	ATP5L2	Q7Z4Y8	100 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	NPFFR1	Q9GZQ6	430 aa		13.11	□□□□□ -0.31
RDH13-223	ENST00000610356	IGHV3OR16-13	A0A075B7E8	117 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	IGHV3-49	A0A0A0MS15	119 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	IGHV3-74	A0A0B4J1X5	117 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	TMEM89	A2RUT3	159 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	C19orf71	A6NCJ1	209 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356		P01737	135 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	PSMB8	P28062	276 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	CT83	Q5H943	113 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	DAZAP1	Q96EP5	407 aa	Known RBP	13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	SLC50A1	Q9BRV3	221 aa		13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	RPP21	Q9H633	154 aa	Known RBP	13.1	□□□□□ -0.31
RDH13-223	ENST00000610356	CHEK1	O14757	476 aa		13.09	□□□□□ -0.31
RDH13-223	ENST00000610356	RAB4A	P20338	218 aa		13.09	□□□□□ -0.31
RDH13-223	ENST00000610356	KLF5	Q13887	457 aa	Predicted RBP	13.09	□□□□□ -0.31
RDH13-223	ENST00000610356	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.09	□□□□□ -0.31
RDH13-223	ENST00000610356	FBLL1	A6NHQ2	334 aa	Known RBP	13.09	□□□□□ -0.31
RDH13-223	ENST00000610356		M0R143	59 aa		13.09	□□□□□ -0.31
RDH13-223	ENST00000610356	ZNF324	O75467	553 aa	Predicted RBP	13.09	□□□□□ -0.31
RDH13-223	ENST00000610356	SLA	Q13239	276 aa		13.09	□□□□□ -0.31
RDH13-223	ENST00000610356		Q8N976	141 aa		13.09	□□□□□ -0.31
RDH13-223	ENST00000610356	RCHY1	Q96PM5	261 aa		13.09	□□□□□ -0.31
RDH13-223	ENST00000610356	SNHG12	Q9BXW3	62 aa		13.09	□□□□□ -0.31

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