RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 ZNF431Q8TF32 576 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-210ENST00000604181 RAB2BQ8WUD1 216 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 TMEM37Q8WXS4 190 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 SAT2Q96F10 170 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-210ENST00000604181 SMIM8Q96KF7 97 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 SLC25A21Q9BQT8 299 aaPredicted RBP11.5□□□□□ -0.57
CCDC12-210ENST00000604181 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 NPVFQ9HCQ7 196 aa11.5□□□□□ -0.57
CCDC12-210ENST00000604181 C9orf170A2RU37 121 aa11.49□□□□□ -0.57
CCDC12-210ENST00000604181 IGLC2P0DOY2 106 aa11.49□□□□□ -0.57
CCDC12-210ENST00000604181 OPCMLQ14982 345 aa11.49□□□□□ -0.57
CCDC12-210ENST00000604181 PYDC2Q56P42 97 aa11.49□□□□□ -0.57
CCDC12-210ENST00000604181 C11orf72Q8NBR9 251 aa11.49□□□□□ -0.57
CCDC12-210ENST00000604181 GSN-AS1Q9NRJ2 163 aa11.49□□□□□ -0.57
CCDC12-210ENST00000604181 AGPAT2O15120 278 aa11.48□□□□□ -0.57
CCDC12-210ENST00000604181 SIVA1O15304 175 aa11.48□□□□□ -0.57
CCDC12-210ENST00000604181 TEPPQ6URK8 271 aa11.48□□□□□ -0.57
CCDC12-210ENST00000604181 MGST2Q99735 147 aa11.48□□□□□ -0.57
CCDC12-210ENST00000604181 PGPEP1Q9NXJ5 209 aa11.48□□□□□ -0.57
CCDC12-210ENST00000604181 TRAV5A0A0B4J249 113 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 FNDC10F2Z333 226 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 H3BMQ9 156 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 NXPH4O95158 308 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 TMBIM6P55061 237 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 AP3S2P59780 193 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 BPIFA4PQ86YQ2 179 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 PYGO2Q9BRQ0 406 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 FLVCR2Q9UPI3 526 aa11.47□□□□□ -0.57
CCDC12-210ENST00000604181 RCL1Q9Y2P8 373 aaKnown RBP11.47□□□□□ -0.57
CCDC12-210ENST00000604181 GOSR2O14653 212 aa11.46□□□□□ -0.57
CCDC12-210ENST00000604181 ERCC8Q13216 396 aa11.46□□□□□ -0.57
CCDC12-210ENST00000604181 OR10P1Q8NGE3 313 aa11.46□□□□□ -0.57
CCDC12-210ENST00000604181 C18orf15Q96N68 181 aa11.46□□□□□ -0.57
CCDC12-210ENST00000604181 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
CCDC12-210ENST00000604181 MGAT4CQ9UBM8 478 aa11.46□□□□□ -0.57
CCDC12-210ENST00000604181 KLF12Q9Y4X4 402 aa11.46□□□□□ -0.57
CCDC12-210ENST00000604181 TRGV2A0A075B6R0 118 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 TRGV1A0A0A0MS02 117 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 M0R3E3 92 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 COX7A2P2O60397 106 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 SCGB1D2O95969 90 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
CCDC12-210ENST00000604181 LEPP41159 167 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 ERVFC1-1P60608 527 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 HAMPP81172 84 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 CD300CQ08708 224 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 PXDC1Q5TGL8 231 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 Q6ZQT7 251 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 S100A7AQ86SG5 101 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 ZNF546Q86UE3 836 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 BCL7BQ9BQE9 202 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 MDFICQ9P1T7 246 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 FUT9Q9Y231 359 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 PXMP4Q9Y6I8 212 aa11.45□□□□□ -0.58
CCDC12-210ENST00000604181 A0A087WTM6 91 aa11.44□□□□□ -0.58
CCDC12-210ENST00000604181 ZNF324O75467 553 aaPredicted RBP11.44□□□□□ -0.58
CCDC12-210ENST00000604181 IGHV3-53P01767 116 aa11.44□□□□□ -0.58
CCDC12-210ENST00000604181 BTN1A1Q13410 526 aa11.44□□□□□ -0.58
CCDC12-210ENST00000604181 C7orf71A4D174 169 aa11.43□□□□□ -0.58
CCDC12-210ENST00000604181 SPINK4O60575 86 aa11.43□□□□□ -0.58
CCDC12-210ENST00000604181 UBE2MP61081 183 aaKnown RBP11.43□□□□□ -0.58
CCDC12-210ENST00000604181 C4orf46Q504U0 113 aa11.43□□□□□ -0.58
CCDC12-210ENST00000604181 C10orf113Q5VZT2 155 aa11.43□□□□□ -0.58
CCDC12-210ENST00000604181 CDPF1Q6NVV7 123 aa11.43□□□□□ -0.58
CCDC12-210ENST00000604181 FAM19A4Q96LR4 140 aa11.43□□□□□ -0.58
CCDC12-210ENST00000604181 TP53TG3Q9ULZ0 132 aa11.43□□□□□ -0.58
CCDC12-210ENST00000604181 C7orf66A4D0T2 115 aa11.42□□□□□ -0.58
CCDC12-210ENST00000604181 KLLNB2CW77 178 aa11.42□□□□□ -0.58
CCDC12-210ENST00000604181 PAX4O43316 350 aa11.42□□□□□ -0.58
CCDC12-210ENST00000604181 TSC22D2O75157 780 aa11.42□□□□□ -0.58
CCDC12-210ENST00000604181 IAH1Q2TAA2 248 aaPredicted RBP11.42□□□□□ -0.58
CCDC12-210ENST00000604181 PRR9Q5T870 116 aa11.42□□□□□ -0.58
CCDC12-210ENST00000604181 MIC13Q5XKP0 118 aa11.42□□□□□ -0.58
CCDC12-210ENST00000604181 FRZBQ92765 325 aa11.42□□□□□ -0.58
CCDC12-210ENST00000604181 RNF24Q9Y225 148 aa11.42□□□□□ -0.58
CCDC12-210ENST00000604181 ICOSQ9Y6W8 199 aa11.42□□□□□ -0.58
CCDC12-210ENST00000604181 NDUFB6O95139 128 aa11.41□□□□□ -0.58
CCDC12-210ENST00000604181 MBPP02686 304 aaPredicted RBP11.41□□□□□ -0.58
CCDC12-210ENST00000604181 SLC25A5P05141 298 aaKnown RBP11.41□□□□□ -0.58
CCDC12-210ENST00000604181 OR4E1P0C645 316 aa11.41□□□□□ -0.58
CCDC12-210ENST00000604181 TCL1AP56279 114 aa11.41□□□□□ -0.58
CCDC12-210ENST00000604181 TAS2R30P59541 319 aa11.41□□□□□ -0.58
CCDC12-210ENST00000604181 LYPD5Q6UWN5 251 aa11.41□□□□□ -0.58
CCDC12-210ENST00000604181 LINC00467Q9BRT7 94 aa11.41□□□□□ -0.58
CCDC12-210ENST00000604181 MRPL16Q9NX20 251 aaKnown RBP11.41□□□□□ -0.58
CCDC12-210ENST00000604181 PTTG2Q9NZH5 202 aa11.41□□□□□ -0.58
CCDC12-210ENST00000604181 EREGO14944 169 aa11.4□□□□□ -0.58
CCDC12-210ENST00000604181 NDUFB4O95168 129 aa11.4□□□□□ -0.58
CCDC12-210ENST00000604181 ANXA2RQ3ZCQ2 193 aa11.4□□□□□ -0.58
CCDC12-210ENST00000604181 EIF4E3Q8N5X7 224 aaKnown RBP11.4□□□□□ -0.58
CCDC12-210ENST00000604181 ZNF680Q8NEM1 530 aa11.4□□□□□ -0.58
CCDC12-210ENST00000604181 DEDD2Q8WXF8 326 aa11.4□□□□□ -0.58
CCDC12-210ENST00000604181 ST6GAL2Q96JF0 529 aa11.4□□□□□ -0.58
CCDC12-210ENST00000604181 AGPAT4-IT1Q9H0P7 198 aa11.4□□□□□ -0.58
CCDC12-210ENST00000604181 DNAJC4Q9NNZ3 241 aa11.4□□□□□ -0.58
CCDC12-210ENST00000604181 GSKIPQ9P0R6 139 aa11.4□□□□□ -0.58
CCDC12-210ENST00000604181 PRAF2O60831 178 aa11.39□□□□□ -0.59
CCDC12-210ENST00000604181 RNASE4P34096 147 aaKnown RBP11.39□□□□□ -0.59
CCDC12-210ENST00000604181 CAMLGP49069 296 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms