RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ARL6Q9H0F7 186 aa10.71□□□□□ -0.69
SSBP4-211ENST00000601614 ARV1Q9H2C2 271 aa10.71□□□□□ -0.69
SSBP4-211ENST00000601614 PRO0255Q9UI72 69 aa10.71□□□□□ -0.69
SSBP4-211ENST00000601614 MED6O75586 246 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 CCNKO75909 580 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 ATP6V1G2O95670 118 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 EVI2AP22794 236 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 TCL1AP56279 114 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 KRTAP10-4P60372 401 aaPredicted RBP10.7□□□□□ -0.7
SSBP4-211ENST00000601614 SRPXP78539 464 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 MORN5Q5VZ52 161 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 Q6ZSA8 131 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 Q8N814 137 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 ZNF680Q8NEM1 530 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 ODF3Q96PU9 254 aa10.7□□□□□ -0.7
SSBP4-211ENST00000601614 CIB3Q96Q77 187 aaPredicted RBP10.7□□□□□ -0.7
SSBP4-211ENST00000601614 NAA50Q9GZZ1 169 aaKnown RBP10.7□□□□□ -0.7
SSBP4-211ENST00000601614 MRPL16Q9NX20 251 aaKnown RBP10.7□□□□□ -0.7
SSBP4-211ENST00000601614 DUXBA0A1W2PPF3 345 aa10.69□□□□□ -0.7
SSBP4-211ENST00000601614 K7EP13 123 aa10.69□□□□□ -0.7
SSBP4-211ENST00000601614 CRYGDP07320 174 aa10.69□□□□□ -0.7
SSBP4-211ENST00000601614 SLC25A6P12236 298 aa10.69□□□□□ -0.7
SSBP4-211ENST00000601614 LEPP41159 167 aa10.69□□□□□ -0.7
SSBP4-211ENST00000601614 RPP30P78346 268 aaKnown RBP10.69□□□□□ -0.7
SSBP4-211ENST00000601614 CD300CQ08708 224 aa10.69□□□□□ -0.7
SSBP4-211ENST00000601614 TP53TG3Q9ULZ0 132 aa10.69□□□□□ -0.7
SSBP4-211ENST00000601614 HHLA3Q9XRX5 114 aa10.69□□□□□ -0.7
SSBP4-211ENST00000601614 ANKRD20A5PA0PJZ0 165 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 C7orf71A4D174 169 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 H3BQ15 152 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 K7EQD1 137 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 C1QBP02746 253 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 ANXA3P12429 323 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 MRPS10P82664 201 aaKnown RBP10.68□□□□□ -0.7
SSBP4-211ENST00000601614 BTN1A1Q13410 526 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 ANXA2RQ3ZCQ2 193 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 AP3S1Q92572 193 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 SAT2Q96F10 170 aaPredicted RBP10.68□□□□□ -0.7
SSBP4-211ENST00000601614 VGLL1Q99990 258 aa10.68□□□□□ -0.7
SSBP4-211ENST00000601614 STRAPQ9Y3F4 350 aaKnown RBP10.68□□□□□ -0.7
SSBP4-211ENST00000601614 E5RGE8 158 aa10.67□□□□□ -0.7
SSBP4-211ENST00000601614 CTDSP2O14595 271 aa10.67□□□□□ -0.7
SSBP4-211ENST00000601614 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
SSBP4-211ENST00000601614 RRAS2P62070 204 aaPredicted RBP10.67□□□□□ -0.7
SSBP4-211ENST00000601614 SELENOTP62341 195 aa10.67□□□□□ -0.7
SSBP4-211ENST00000601614 SLC38A11Q08AI6 406 aa10.67□□□□□ -0.7
SSBP4-211ENST00000601614 Q6ZQT7 251 aa10.67□□□□□ -0.7
SSBP4-211ENST00000601614 LINC00305Q7Z4B0 112 aa10.67□□□□□ -0.7
SSBP4-211ENST00000601614 EIF4E3Q8N5X7 224 aaKnown RBP10.67□□□□□ -0.7
SSBP4-211ENST00000601614 SCP2D1Q9UJQ7 156 aa10.67□□□□□ -0.7
SSBP4-211ENST00000601614 A0A087WXM4 84 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 KLLNB2CW77 178 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 PSCAO43653 123 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
SSBP4-211ENST00000601614 ERCC8Q13216 396 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 WFDC2Q14508 124 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 CTF1Q16619 201 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 LRTM2Q8N967 370 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 SCGB3A2Q96PL1 93 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 MRPL32Q9BYC8 188 aaKnown RBP10.66□□□□□ -0.7
SSBP4-211ENST00000601614 VCX3AQ9NNX9 186 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 RABL2BQ9UNT1 228 aa10.66□□□□□ -0.7
SSBP4-211ENST00000601614 K7EPK0 472 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 CTDSPLO15194 276 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 OXTP01178 125 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 SRIP30626 198 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 SLAQ13239 276 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 BPIFA4PQ86YQ2 179 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 TMEM37Q8WXS4 190 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 FAM19A4Q96LR4 140 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 MCUBQ9NWR8 336 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 PXMP4Q9Y6I8 212 aa10.65□□□□□ -0.7
SSBP4-211ENST00000601614 RGS5O15539 181 aa10.64□□□□□ -0.71
SSBP4-211ENST00000601614 SFTA3P0C7M3 94 aa10.64□□□□□ -0.71
SSBP4-211ENST00000601614 OPCMLQ14982 345 aa10.64□□□□□ -0.71
SSBP4-211ENST00000601614 IBA57Q5T440 356 aaKnown RBP10.64□□□□□ -0.71
SSBP4-211ENST00000601614 PRR9Q5T870 116 aa10.64□□□□□ -0.71
SSBP4-211ENST00000601614 C10orf126Q8N4M7 172 aa10.64□□□□□ -0.71
SSBP4-211ENST00000601614 RCL1Q9Y2P8 373 aaKnown RBP10.64□□□□□ -0.71
SSBP4-211ENST00000601614 M0R3E3 92 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 HOXB5P09067 269 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 GYPEP15421 78 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 VAMP1P23763 118 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
SSBP4-211ENST00000601614 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
SSBP4-211ENST00000601614 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 IL18Q14116 193 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 C4orf46Q504U0 113 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 TMEM128Q5BJH2 165 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 S100A7AQ86SG5 101 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 ZNF479Q96JC4 524 aa10.63□□□□□ -0.71
SSBP4-211ENST00000601614 PKHD1L1Q86WI1 4243 aa10.62□□□□□ -0.71
SSBP4-211ENST00000601614 TRGV4A0A0C4DH28 118 aa10.62□□□□□ -0.71
SSBP4-211ENST00000601614 MPDU1O75352 247 aa10.62□□□□□ -0.71
SSBP4-211ENST00000601614 SCXQ7RTU7 201 aa10.62□□□□□ -0.71
SSBP4-211ENST00000601614 Q9HAA7 133 aa10.62□□□□□ -0.71
SSBP4-211ENST00000601614 NPVFQ9HCQ7 196 aa10.62□□□□□ -0.71
SSBP4-211ENST00000601614 PSENENQ9NZ42 101 aa10.62□□□□□ -0.71
SSBP4-211ENST00000601614 TRAV5A0A0B4J249 113 aa10.61□□□□□ -0.71
SSBP4-211ENST00000601614 IBA57-AS1B1ANH7 110 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms