RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 GNPNAT1Q96EK6 184 aaPredicted RBP7.05□□□□□ -1.28
HIF3A-219ENST00000600879 NARS2Q96I59 477 aaKnown RBP7.05□□□□□ -1.28
HIF3A-219ENST00000600879 SH3BGRL3Q9H299 93 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 HIGD1AQ9Y241 93 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 RFNGQ9Y644 331 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 NBDYA0A0U1RRE5 68 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 A0A1W2PS18 150 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 EPM2AB3EWF7 344 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 TPT1P13693 172 aaKnown RBP7.04□□□□□ -1.28
HIF3A-219ENST00000600879 CRYBB3P26998 211 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 FUSP35637 526 aaKnown RBP eCLIP7.04□□□□□ -1.28
HIF3A-219ENST00000600879 DEFB1P60022 68 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 KRTAP10-2P60368 255 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 PXDC1Q5TGL8 231 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 C10orf113Q5VZT2 155 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 S100A7AQ86SG5 101 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 SLC51BQ86UW2 128 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 FAM210BQ96KR6 192 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 PFDN5Q99471 154 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 NIPSNAP3BQ9BS92 247 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 ATG101Q9BSB4 218 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 PSMG3Q9BT73 122 aaPredicted RBP7.04□□□□□ -1.28
HIF3A-219ENST00000600879 C1QTNF4Q9BXJ3 329 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 ARV1Q9H2C2 271 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 SLC25A32Q9H2D1 315 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 DKK2Q9UBU2 259 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 PFDN2Q9UHV9 154 aa7.04□□□□□ -1.28
HIF3A-219ENST00000600879 S100A7P31151 101 aa7.03□□□□□ -1.28
HIF3A-219ENST00000600879 NUTF2P61970 127 aaKnown RBP7.03□□□□□ -1.28
HIF3A-219ENST00000600879 ACOT6Q3I5F7 207 aaPredicted RBP7.03□□□□□ -1.28
HIF3A-219ENST00000600879 GCSAMLQ5JQS6 135 aa7.03□□□□□ -1.28
HIF3A-219ENST00000600879 PATE2Q6UY27 113 aa7.03□□□□□ -1.28
HIF3A-219ENST00000600879 ZNF705AQ6ZN79 300 aaPredicted RBP7.03□□□□□ -1.28
HIF3A-219ENST00000600879 BAP18Q8IXM2 172 aa7.03□□□□□ -1.28
HIF3A-219ENST00000600879 OR2G3Q8NGZ4 309 aa7.03□□□□□ -1.28
HIF3A-219ENST00000600879 UHRF2Q96PU4 802 aa7.03□□□□□ -1.28
HIF3A-219ENST00000600879 DNAJC4Q9NNZ3 241 aa7.03□□□□□ -1.28
HIF3A-219ENST00000600879 BOLA1Q9Y3E2 137 aa7.03□□□□□ -1.28
HIF3A-219ENST00000600879 TMEM189A5PLL7 270 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 ZNF705FA8MVS1 300 aaPredicted RBP7.02□□□□□ -1.29
HIF3A-219ENST00000600879 H3BMM0 161 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 H3BRN7 92 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 ZNF705DP0CH99 300 aaPredicted RBP7.02□□□□□ -1.29
HIF3A-219ENST00000600879 ZNF705BP0CI00 300 aaPredicted RBP7.02□□□□□ -1.29
HIF3A-219ENST00000600879 RAB2AP61019 212 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 SERF2P84101 59 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 LINC00305Q7Z4B0 112 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 STOML3Q8TAV4 291 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 TMEM37Q8WXS4 190 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 SLC25A39Q9BZJ4 359 aaPredicted RBP7.02□□□□□ -1.29
HIF3A-219ENST00000600879 SLC25A22Q9H936 323 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 U3KQE9 123 aa7.02□□□□□ -1.29
HIF3A-219ENST00000600879 ZNF98A6NK75 572 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 MBP02144 154 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 SEC11BP0C7V7 166 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 M6PRP20645 277 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 AKR1C8PQ5T2L2 129 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 GDF5OSQ5U4N7 250 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 FAM78BQ5VT40 261 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 SPATA31B1PQ5VZV4 182 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 FAM122CQ6P4D5 195 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 C16orf54Q6UWD8 224 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 OR10G4Q8NGN3 311 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 OR10G9Q8NGN4 311 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 OR10G7Q8NGN6 311 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 ZNRF2Q8NHG8 242 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 NEU1Q99519 415 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 SHANK2-AS3Q9BTD1 123 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 MRPL32Q9BYC8 188 aaKnown RBP7.01□□□□□ -1.29
HIF3A-219ENST00000600879 RNF24Q9Y225 148 aa7.01□□□□□ -1.29
HIF3A-219ENST00000600879 YTHDF2Q9Y5A9 579 aaKnown RBP7.01□□□□□ -1.29
HIF3A-219ENST00000600879 MYCBP2O75592 4640 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 LOC102723971A0A1B0GUV8 181 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 A0A1W2PPV4 95 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 BUB3O43684 328 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 NUDT3O95989 172 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 DAD1P61803 113 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 SNRPD3P62318 126 aaKnown RBP7□□□□□ -1.29
HIF3A-219ENST00000600879 RHOBP62745 196 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 C1orf194Q5T5A4 169 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 EIF5AL1Q6IS14 154 aaKnown RBP7□□□□□ -1.29
HIF3A-219ENST00000600879 SIGLEC15Q6ZMC9 328 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 MIR17HGQ75NE6 70 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 OR8I2Q8N0Y5 310 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 TMED6Q8WW62 240 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 FUT9Q9Y231 359 aa7□□□□□ -1.29
HIF3A-219ENST00000600879 TRAV5A0A0B4J249 113 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 SMIM9A6NGZ8 99 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 HLA-DRB4P13762 266 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 RPL7P18124 248 aaKnown RBP6.99□□□□□ -1.29
HIF3A-219ENST00000600879 GALR1P47211 349 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 CDC34P49427 236 aaPredicted RBP6.99□□□□□ -1.29
HIF3A-219ENST00000600879 FAM3BP58499 235 aaPredicted RBP6.99□□□□□ -1.29
HIF3A-219ENST00000600879 MORN5Q5VZ52 161 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 C15orf53Q8NAA6 179 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 OR4B1Q8NGF8 309 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 GLMPQ8WWB7 406 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 GPR82Q96P67 336 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 SLC35B3Q9H1N7 401 aa6.99□□□□□ -1.29
HIF3A-219ENST00000600879 SEPSECSQ9HD40 501 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms