RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CDC34P49427 236 aaPredicted RBP10.02□□□□□ -0.81
VRK3-219ENST00000600137 DEFB135Q30KP9 77 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 KHDC3LQ587J8 217 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 PQLC2Q6ZP29 291 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 ZNF738Q8NE65 137 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 OR8A1Q8NGG7 326 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 STOML3Q8TAV4 291 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 ZMAT4Q9H898 229 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 CLEC5AQ9NY25 188 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 TP53TG1Q9Y2A0 90 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 IGKV3-20P01619 116 aa10.01□□□□□ -0.81
VRK3-219ENST00000600137 CNN1P51911 297 aaKnown RBP10.01□□□□□ -0.81
VRK3-219ENST00000600137 TAS2R45P59539 299 aa10.01□□□□□ -0.81
VRK3-219ENST00000600137 EBLN2Q6P2I7 272 aa10.01□□□□□ -0.81
VRK3-219ENST00000600137 MORN3Q6PF18 240 aaPredicted RBP10.01□□□□□ -0.81
VRK3-219ENST00000600137 BAP18Q8IXM2 172 aa10.01□□□□□ -0.81
VRK3-219ENST00000600137 ACTR3CQ9C0K3 210 aaPredicted RBP10.01□□□□□ -0.81
VRK3-219ENST00000600137 SLC35B3Q9H1N7 401 aa10.01□□□□□ -0.81
VRK3-219ENST00000600137 SPRY2O43597 315 aa10□□□□□ -0.81
VRK3-219ENST00000600137 CA1P00915 261 aaPredicted RBP10□□□□□ -0.81
VRK3-219ENST00000600137 ARL14EPLP0DKL9 152 aa10□□□□□ -0.81
VRK3-219ENST00000600137 FHITP49789 147 aa10□□□□□ -0.81
VRK3-219ENST00000600137 UBE2L3P68036 154 aaKnown RBP10□□□□□ -0.81
VRK3-219ENST00000600137 PSG9Q00887 426 aa10□□□□□ -0.81
VRK3-219ENST00000600137 ICAM4Q14773 271 aa10□□□□□ -0.81
VRK3-219ENST00000600137 LYPD1Q8N2G4 141 aa10□□□□□ -0.81
VRK3-219ENST00000600137 OR4B1Q8NGF8 309 aa10□□□□□ -0.81
VRK3-219ENST00000600137 MRPL53Q96EL3 112 aaKnown RBP10□□□□□ -0.81
VRK3-219ENST00000600137 CTXND1A0A1B0GTU2 59 aa9.99□□□□□ -0.81
VRK3-219ENST00000600137 CRXO43186 299 aaPredicted RBP9.99□□□□□ -0.81
VRK3-219ENST00000600137 PFDN1O60925 122 aa9.99□□□□□ -0.81
VRK3-219ENST00000600137 DUSP14O95147 198 aaKnown RBP9.99□□□□□ -0.81
VRK3-219ENST00000600137 GCHFRP30047 84 aa9.99□□□□□ -0.81
VRK3-219ENST00000600137 FXYD7P58549 80 aa9.99□□□□□ -0.81
VRK3-219ENST00000600137 RANP62826 216 aaKnown RBP9.99□□□□□ -0.81
VRK3-219ENST00000600137 ZFP69Q49AA0 526 aa9.99□□□□□ -0.81
VRK3-219ENST00000600137 EDA2RQ9HAV5 297 aa9.99□□□□□ -0.81
VRK3-219ENST00000600137 PRELID1Q9Y255 219 aa9.99□□□□□ -0.81
VRK3-219ENST00000600137 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
VRK3-219ENST00000600137 TPT1P13693 172 aaKnown RBP9.98□□□□□ -0.81
VRK3-219ENST00000600137 NKX2-5P52952 324 aaPredicted RBP9.98□□□□□ -0.81
VRK3-219ENST00000600137 AKR1C8PQ5T2L2 129 aa9.98□□□□□ -0.81
VRK3-219ENST00000600137 TMED6Q8WW62 240 aa9.98□□□□□ -0.81
VRK3-219ENST00000600137 Q9H3A6 140 aa9.98□□□□□ -0.81
VRK3-219ENST00000600137 TMPRSS5Q9H3S3 457 aa9.98□□□□□ -0.81
VRK3-219ENST00000600137 XCL2Q9UBD3 114 aa9.98□□□□□ -0.81
VRK3-219ENST00000600137 CSMD3Q7Z407 3707 aa9.97□□□□□ -0.81
VRK3-219ENST00000600137 ZNF705EA8MWA4 302 aaPredicted RBP9.97□□□□□ -0.81
VRK3-219ENST00000600137 CXorf1O96002 111 aa9.97□□□□□ -0.81
VRK3-219ENST00000600137 CT45A10P0DMU9 189 aa9.97□□□□□ -0.81
VRK3-219ENST00000600137 EIF5AP63241 154 aaKnown RBP9.97□□□□□ -0.81
VRK3-219ENST00000600137 HIST1H1AQ02539 215 aaPredicted RBP9.97□□□□□ -0.81
VRK3-219ENST00000600137 SLC51BQ86UW2 128 aa9.97□□□□□ -0.81
VRK3-219ENST00000600137 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
VRK3-219ENST00000600137 MBD3L1Q8WWY6 194 aa9.97□□□□□ -0.81
VRK3-219ENST00000600137 AGPAT4-IT1Q9H0P7 198 aa9.97□□□□□ -0.81
VRK3-219ENST00000600137 X6R8D5 127 aa9.97□□□□□ -0.81
VRK3-219ENST00000600137 PGPA6NDG6 321 aa9.96□□□□□ -0.82
VRK3-219ENST00000600137 UMAD1C9J7I0 102 aa9.96□□□□□ -0.82
VRK3-219ENST00000600137 FGF8P55075 233 aaPredicted RBP9.96□□□□□ -0.82
VRK3-219ENST00000600137 NUTF2P61970 127 aaKnown RBP9.96□□□□□ -0.82
VRK3-219ENST00000600137 ERCC8Q13216 396 aa9.96□□□□□ -0.82
VRK3-219ENST00000600137 KIR3DS1Q14943 382 aa9.96□□□□□ -0.82
VRK3-219ENST00000600137 ZNF705AQ6ZN79 300 aaPredicted RBP9.96□□□□□ -0.82
VRK3-219ENST00000600137 FAM19A4Q96LR4 140 aa9.96□□□□□ -0.82
VRK3-219ENST00000600137 VGLL1Q99990 258 aa9.96□□□□□ -0.82
VRK3-219ENST00000600137 AAMDCQ9H7C9 122 aa9.96□□□□□ -0.82
VRK3-219ENST00000600137 OTORQ9NRC9 128 aa9.96□□□□□ -0.82
VRK3-219ENST00000600137 BOLA1Q9Y3E2 137 aa9.96□□□□□ -0.82
VRK3-219ENST00000600137 M0R2Z0 102 aa9.95□□□□□ -0.82
VRK3-219ENST00000600137 RBMY1A1P0DJD3 496 aaKnown RBP9.95□□□□□ -0.82
VRK3-219ENST00000600137 RBMY1CP0DJD4 496 aa9.95□□□□□ -0.82
VRK3-219ENST00000600137 RBMY1FQ15415 496 aaKnown RBP9.95□□□□□ -0.82
VRK3-219ENST00000600137 SPINK13Q1W4C9 94 aa9.95□□□□□ -0.82
VRK3-219ENST00000600137 C9orf47Q6ZRZ4 202 aa9.95□□□□□ -0.82
VRK3-219ENST00000600137 OR11H2Q8NH07 326 aa9.95□□□□□ -0.82
VRK3-219ENST00000600137 RARRES2Q99969 163 aa9.95□□□□□ -0.82
VRK3-219ENST00000600137 C1QTNF4Q9BXJ3 329 aa9.95□□□□□ -0.82
VRK3-219ENST00000600137 IGKV2-40A0A087WW87 121 aaPredicted RBP9.94□□□□□ -0.82
VRK3-219ENST00000600137 MAP1LC3B2A6NCE7 125 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 BOLA2-SMG1P6H3BVE0 249 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 IGKV2D-40P01614 121 aaPredicted RBP9.94□□□□□ -0.82
VRK3-219ENST00000600137 SULT1A2P50226 295 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 ARL6IP6Q8N6S5 226 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 OR10J6PQ8NGY7 276 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 IGF2BP2-AS1Q96M15 143 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 MAP1LC3BQ9GZQ8 125 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 TMEM167BQ9NRX6 74 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 STARD9Q9P2P6 4700 aa9.94□□□□□ -0.82
VRK3-219ENST00000600137 TRAV12-2A0A075B6T6 113 aa9.93□□□□□ -0.82
VRK3-219ENST00000600137 GGTLC3B5MD39 225 aa9.93□□□□□ -0.82
VRK3-219ENST00000600137 DPPA3Q6W0C5 159 aa9.93□□□□□ -0.82
VRK3-219ENST00000600137 Q8NAQ8 132 aa9.93□□□□□ -0.82
VRK3-219ENST00000600137 FAM213BQ8TBF2 198 aa9.93□□□□□ -0.82
VRK3-219ENST00000600137 LINC00477Q96M19 166 aa9.93□□□□□ -0.82
VRK3-219ENST00000600137 WWC2-AS2Q96NR7 200 aa9.93□□□□□ -0.82
VRK3-219ENST00000600137 ODF3Q96PU9 254 aa9.93□□□□□ -0.82
VRK3-219ENST00000600137 PPP1R14DQ9NXH3 145 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms