RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PRSS29PA6NIE9 313 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 F6UB75 175 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 ATP6V1G1O75348 118 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 GAMTQ14353 236 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 TEPPQ6URK8 271 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 COMMD7Q86VX2 200 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 SLC7A5P1Q8MH63 180 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 PCNPQ8WW12 178 aaKnown RBP10.45□□□□□ -0.74
IRF3-223ENST00000599223 LINC00052Q96N35 136 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 MED9Q9NWA0 146 aa10.45□□□□□ -0.74
IRF3-223ENST00000599223 IGKV1OR2-108A0A075B7D4 117 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 ZFP92A6NM28 416 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 S100A1P23297 94 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 PSMB3P49720 205 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 LYZP61626 148 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 FAM222AQ5U5X8 452 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 Q6ZRG5 221 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 FAM213BQ8TBF2 198 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 C20orf173Q96LM9 149 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 RSG1Q9BU20 258 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 DKK2Q9UBU2 259 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 WDR83OSQ9Y284 106 aa10.44□□□□□ -0.74
IRF3-223ENST00000599223 IGLV2-18A0A075B6J9 118 aa10.43□□□□□ -0.74
IRF3-223ENST00000599223 HBE1P02100 147 aa10.43□□□□□ -0.74
IRF3-223ENST00000599223 SPART-AS1P0CW21 52 aa10.43□□□□□ -0.74
IRF3-223ENST00000599223 C1orf158Q8N1D5 194 aa10.43□□□□□ -0.74
IRF3-223ENST00000599223 OR4B1Q8NGF8 309 aa10.43□□□□□ -0.74
IRF3-223ENST00000599223 C17orf77Q96MU5 243 aa10.43□□□□□ -0.74
IRF3-223ENST00000599223 NPCDR1Q9BY65 106 aa10.43□□□□□ -0.74
IRF3-223ENST00000599223 PRSS46E5RG02 174 aa10.42□□□□□ -0.74
IRF3-223ENST00000599223 ACOT6Q3I5F7 207 aaPredicted RBP10.42□□□□□ -0.74
IRF3-223ENST00000599223 FFAR4Q5NUL3 377 aa10.42□□□□□ -0.74
IRF3-223ENST00000599223 PXDC1Q5TGL8 231 aa10.42□□□□□ -0.74
IRF3-223ENST00000599223 Q6ZR54 194 aa10.42□□□□□ -0.74
IRF3-223ENST00000599223 TMEM144Q7Z5S9 345 aa10.42□□□□□ -0.74
IRF3-223ENST00000599223 CLUHP3Q96NS8 147 aa10.42□□□□□ -0.74
IRF3-223ENST00000599223 RFNGQ9Y644 331 aa10.42□□□□□ -0.74
IRF3-223ENST00000599223 TMEM189A5PLL7 270 aa10.41□□□□□ -0.74
IRF3-223ENST00000599223 SMIM9A6NGZ8 99 aa10.41□□□□□ -0.74
IRF3-223ENST00000599223 H2AFB1P0C5Y9 115 aa10.41□□□□□ -0.74
IRF3-223ENST00000599223 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
IRF3-223ENST00000599223 HTN3P15516 51 aa10.41□□□□□ -0.74
IRF3-223ENST00000599223 LGALS9BQ3B8N2 356 aa10.41□□□□□ -0.74
IRF3-223ENST00000599223 FAM78BQ5VT40 261 aa10.41□□□□□ -0.74
IRF3-223ENST00000599223 NIPSNAP3BQ9BS92 247 aa10.41□□□□□ -0.74
IRF3-223ENST00000599223 YTHDF2Q9Y5A9 579 aaKnown RBP10.41□□□□□ -0.74
IRF3-223ENST00000599223 A0A0J9YX75 114 aa10.4□□□□□ -0.74
IRF3-223ENST00000599223 LOC102723971A0A1B0GUV8 181 aa10.4□□□□□ -0.74
IRF3-223ENST00000599223 ISLRO14498 428 aa10.4□□□□□ -0.74
IRF3-223ENST00000599223 C1orf194Q5T5A4 169 aa10.4□□□□□ -0.74
IRF3-223ENST00000599223 AMTNQ6UX39 209 aa10.4□□□□□ -0.74
IRF3-223ENST00000599223 THAP8Q8NA92 274 aa10.4□□□□□ -0.74
IRF3-223ENST00000599223 TRGV9Q99603 122 aa10.4□□□□□ -0.74
IRF3-223ENST00000599223 ACTR3CQ9C0K3 210 aaPredicted RBP10.4□□□□□ -0.74
IRF3-223ENST00000599223 RAB19A4D1S5 217 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 A8MTW9 85 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 AGPAT2O15120 278 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 PRM2P04554 102 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 FABP1P07148 127 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 M6PRP20645 277 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 ID1P41134 155 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 PSG9Q00887 426 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 TMEM88Q6PEY1 159 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 ZNF575Q86XF7 245 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 UBE2DNLQ8IWF7 75 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 OR8I2Q8N0Y5 310 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 OR10G4Q8NGN3 311 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 OR10G9Q8NGN4 311 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 OR10G7Q8NGN6 311 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 PXMP4Q9Y6I8 212 aa10.39□□□□□ -0.75
IRF3-223ENST00000599223 LRP1BQ9NZR2 4599 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 A0A1W2PPV4 95 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 RPL29P47914 159 aaKnown RBP10.38□□□□□ -0.75
IRF3-223ENST00000599223 B2MP61769 119 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 SELENOTP62341 195 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 UQCC3Q6UW78 93 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 SFT2D1Q8WV19 159 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 FAM210BQ96KR6 192 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 MGST2Q99735 147 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 SLC39A9Q9NUM3 307 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 GOLT1BQ9Y3E0 138 aa10.38□□□□□ -0.75
IRF3-223ENST00000599223 GATA2P23769 480 aaPredicted RBP10.37□□□□□ -0.75
IRF3-223ENST00000599223 IGFL4Q6B9Z1 124 aa10.37□□□□□ -0.75
IRF3-223ENST00000599223 EBLN2Q6P2I7 272 aa10.37□□□□□ -0.75
IRF3-223ENST00000599223 EIF4E3Q8N5X7 224 aaKnown RBP10.37□□□□□ -0.75
IRF3-223ENST00000599223 KRTAP4-5Q9BYR2 181 aa10.37□□□□□ -0.75
IRF3-223ENST00000599223 SLC25A22Q9H936 323 aa10.37□□□□□ -0.75
IRF3-223ENST00000599223 RPRMQ9NS64 109 aa10.37□□□□□ -0.75
IRF3-223ENST00000599223 DOK5Q9P104 306 aa10.37□□□□□ -0.75
IRF3-223ENST00000599223 TRAV8-2A0A0B4J237 113 aa10.36□□□□□ -0.75
IRF3-223ENST00000599223 CTXND1A0A1B0GTU2 59 aa10.36□□□□□ -0.75
IRF3-223ENST00000599223 TEX48A0A1B0GUV7 120 aa10.36□□□□□ -0.75
IRF3-223ENST00000599223 ZNF98A6NK75 572 aa10.36□□□□□ -0.75
IRF3-223ENST00000599223 CRXO43186 299 aaPredicted RBP10.36□□□□□ -0.75
IRF3-223ENST00000599223 IFNA1P01562 189 aa10.36□□□□□ -0.75
IRF3-223ENST00000599223 FHITP49789 147 aa10.36□□□□□ -0.75
IRF3-223ENST00000599223 RRN3P1Q2M238 152 aa10.36□□□□□ -0.75
IRF3-223ENST00000599223 SPATA31B1PQ5VZV4 182 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms