RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 ZBTB8BQ8NAP8 495 aaPredicted RBP12.24□□□□□ -0.45
HOMER3-210ENST00000599097 GNPNAT1Q96EK6 184 aaPredicted RBP12.24□□□□□ -0.45
HOMER3-210ENST00000599097 ODF3Q96PU9 254 aa12.24□□□□□ -0.45
HOMER3-210ENST00000599097 PFDN5Q99471 154 aa12.24□□□□□ -0.45
HOMER3-210ENST00000599097 H3BNG1 76 aa12.23□□□□□ -0.45
HOMER3-210ENST00000599097 CDK2AP2O75956 126 aa12.23□□□□□ -0.45
HOMER3-210ENST00000599097 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
HOMER3-210ENST00000599097 PVALBP20472 110 aaPredicted RBP12.23□□□□□ -0.45
HOMER3-210ENST00000599097 ZNF575Q86XF7 245 aa12.23□□□□□ -0.45
HOMER3-210ENST00000599097 C12orf45Q8N5I9 185 aaPredicted RBP12.23□□□□□ -0.45
HOMER3-210ENST00000599097 OR1L4Q8NGR5 311 aa12.23□□□□□ -0.45
HOMER3-210ENST00000599097 RNF141Q8WVD5 230 aa12.23□□□□□ -0.45
HOMER3-210ENST00000599097 FAT2Q9NYQ8 4349 aa12.23□□□□□ -0.45
HOMER3-210ENST00000599097 C7orf66A4D0T2 115 aa12.22□□□□□ -0.45
HOMER3-210ENST00000599097 MRPS12O15235 138 aaKnown RBP12.22□□□□□ -0.45
HOMER3-210ENST00000599097 CAMLGP49069 296 aa12.22□□□□□ -0.45
HOMER3-210ENST00000599097 OR5I1Q13606 314 aa12.22□□□□□ -0.45
HOMER3-210ENST00000599097 PATE2Q6UY27 113 aa12.22□□□□□ -0.45
HOMER3-210ENST00000599097 SSX7Q7RTT5 188 aa12.22□□□□□ -0.45
HOMER3-210ENST00000599097 RXFP4Q8TDU9 374 aa12.22□□□□□ -0.45
HOMER3-210ENST00000599097 SEC22CQ9BRL7 303 aa12.22□□□□□ -0.45
HOMER3-210ENST00000599097 RCL1Q9Y2P8 373 aaKnown RBP12.22□□□□□ -0.45
HOMER3-210ENST00000599097 LINC00588Q9Y4M8 146 aa12.22□□□□□ -0.45
HOMER3-210ENST00000599097 A0A1W2PPQ1 181 aa12.21□□□□□ -0.45
HOMER3-210ENST00000599097 CCNKO75909 580 aa12.21□□□□□ -0.45
HOMER3-210ENST00000599097 PRM2P04554 102 aa12.21□□□□□ -0.45
HOMER3-210ENST00000599097 FCN2Q15485 313 aa12.21□□□□□ -0.45
HOMER3-210ENST00000599097 PYGO2Q9BRQ0 406 aa12.21□□□□□ -0.45
HOMER3-210ENST00000599097 DNAJC4Q9NNZ3 241 aa12.21□□□□□ -0.45
HOMER3-210ENST00000599097 ZNF253O75346 499 aa12.2□□□□□ -0.46
HOMER3-210ENST00000599097 BCAP31P51572 246 aa12.2□□□□□ -0.46
HOMER3-210ENST00000599097 TNP2Q05952 138 aa12.2□□□□□ -0.46
HOMER3-210ENST00000599097 ZNF680Q8NEM1 530 aa12.2□□□□□ -0.46
HOMER3-210ENST00000599097 Q9H8V8 135 aa12.2□□□□□ -0.46
HOMER3-210ENST00000599097 TRAV26-1A0A087WT03 109 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 MBPP02686 304 aaPredicted RBP12.19□□□□□ -0.46
HOMER3-210ENST00000599097 IGLC2P0DOY2 106 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 CAV2P51636 162 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 HBG1P69891 147 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 HBG2P69892 147 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 GFI1BQ5VTD9 330 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 LINC00612Q8N6U2 182 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 MRPL53Q96EL3 112 aaKnown RBP12.19□□□□□ -0.46
HOMER3-210ENST00000599097 MGST2Q99735 147 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 UQCC1Q9NVA1 299 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 DNAH2Q9P225 4427 aa12.19□□□□□ -0.46
HOMER3-210ENST00000599097 DNAH17Q9UFH2 4485 aa12.18□□□□□ -0.46
HOMER3-210ENST00000599097 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
HOMER3-210ENST00000599097 OPCMLQ14982 345 aa12.18□□□□□ -0.46
HOMER3-210ENST00000599097 STX12Q86Y82 276 aa12.18□□□□□ -0.46
HOMER3-210ENST00000599097 UPK3BQ9BT76 320 aa12.18□□□□□ -0.46
HOMER3-210ENST00000599097 Q9H3A6 140 aa12.18□□□□□ -0.46
HOMER3-210ENST00000599097 PRELID1Q9Y255 219 aa12.18□□□□□ -0.46
HOMER3-210ENST00000599097 GAGE12BA1L429 117 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 NPIPB6E9PJ23 425 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 SSNA1O43805 119 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 GAGE7O76087 117 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 SLC25A5P05141 298 aaKnown RBP12.17□□□□□ -0.46
HOMER3-210ENST00000599097 GAGE12FP0CL80 117 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 GAGE12GP0CL81 117 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 GAGE12IP0CL82 117 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 PDE6HQ13956 83 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 TMEM37Q8WXS4 190 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 LSM5Q9Y4Y9 91 aaKnown RBP12.17□□□□□ -0.46
HOMER3-210ENST00000599097 ALG5Q9Y673 324 aa12.17□□□□□ -0.46
HOMER3-210ENST00000599097 C5orf51A6NDU8 294 aa12.16□□□□□ -0.46
HOMER3-210ENST00000599097 FAM25EA8MYX2 175 aa12.16□□□□□ -0.46
HOMER3-210ENST00000599097 SLC17A3O00476 420 aa12.16□□□□□ -0.46
HOMER3-210ENST00000599097 S100A11P31949 105 aa12.16□□□□□ -0.46
HOMER3-210ENST00000599097 CYCSP99999 105 aaKnown RBP12.16□□□□□ -0.46
HOMER3-210ENST00000599097 ASB13Q8WXK3 278 aa12.16□□□□□ -0.46
HOMER3-210ENST00000599097 MRPS16Q9Y3D3 137 aaKnown RBP12.16□□□□□ -0.46
HOMER3-210ENST00000599097 TRGV2A0A075B6R0 118 aa12.15□□□□□ -0.46
HOMER3-210ENST00000599097 MPDU1O75352 247 aa12.15□□□□□ -0.46
HOMER3-210ENST00000599097 RPL29P47914 159 aaKnown RBP12.15□□□□□ -0.46
HOMER3-210ENST00000599097 BAXQ07812 192 aa12.15□□□□□ -0.46
HOMER3-210ENST00000599097 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
HOMER3-210ENST00000599097 SAT2Q96F10 170 aaPredicted RBP12.15□□□□□ -0.46
HOMER3-210ENST00000599097 AAMDCQ9H7C9 122 aa12.15□□□□□ -0.46
HOMER3-210ENST00000599097 WDR83OSQ9Y284 106 aa12.15□□□□□ -0.46
HOMER3-210ENST00000599097 TRAV12-3A0A0B4J271 114 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 SULT1A1P50225 295 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 ATP6V1FQ16864 119 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 CHAC2Q8WUX2 184 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 C2orf50Q96LR7 162 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 LINC00477Q96M19 166 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 MED28Q9H204 178 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 SLC39A9Q9NUM3 307 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 TMEM14CQ9P0S9 112 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 TIMM9Q9Y5J7 89 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 PKD1P98161 4303 aa12.14□□□□□ -0.47
HOMER3-210ENST00000599097 A0A0J9YY99 117 aa12.13□□□□□ -0.47
HOMER3-210ENST00000599097 C7orf71A4D174 169 aa12.13□□□□□ -0.47
HOMER3-210ENST00000599097 H3BQ15 152 aa12.13□□□□□ -0.47
HOMER3-210ENST00000599097 H3BTX0 84 aa12.13□□□□□ -0.47
HOMER3-210ENST00000599097 CST7O76096 145 aa12.13□□□□□ -0.47
HOMER3-210ENST00000599097 NMBP08949 121 aa12.13□□□□□ -0.47
HOMER3-210ENST00000599097 SNRPCP09234 159 aaKnown RBP12.13□□□□□ -0.47
HOMER3-210ENST00000599097 CT45A10P0DMU9 189 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms