RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 ZNF726P1Q15940 193 aa13.34□□□□□ -0.27
LIG1-216ENST00000598938 EBLN2Q6P2I7 272 aa13.34□□□□□ -0.27
LIG1-216ENST00000598938 SSX7Q7RTT5 188 aa13.34□□□□□ -0.27
LIG1-216ENST00000598938 ZNF738Q8NE65 137 aa13.34□□□□□ -0.27
LIG1-216ENST00000598938 CLUHP3Q96NS8 147 aa13.34□□□□□ -0.27
LIG1-216ENST00000598938 CSTL1Q9H114 145 aa13.34□□□□□ -0.27
LIG1-216ENST00000598938 PLA2G2EQ9NZK7 142 aa13.34□□□□□ -0.27
LIG1-216ENST00000598938 A8MTW9 85 aa13.33□□□□□ -0.28
LIG1-216ENST00000598938 ARL14EPLP0DKL9 152 aa13.33□□□□□ -0.28
LIG1-216ENST00000598938 SLC51BQ86UW2 128 aa13.33□□□□□ -0.28
LIG1-216ENST00000598938 RPUSD4Q96CM3 377 aaKnown RBP13.33□□□□□ -0.28
LIG1-216ENST00000598938 PHYHIPLQ96FC7 376 aa13.33□□□□□ -0.28
LIG1-216ENST00000598938 RCHY1Q96PM5 261 aa13.33□□□□□ -0.28
LIG1-216ENST00000598938 DNAH7Q8WXX0 4024 aa13.33□□□□□ -0.28
LIG1-216ENST00000598938 CTXND1A0A1B0GTU2 59 aa13.32□□□□□ -0.28
LIG1-216ENST00000598938 C4BPBP20851 252 aa13.32□□□□□ -0.28
LIG1-216ENST00000598938 MORN3Q6PF18 240 aaPredicted RBP13.32□□□□□ -0.28
LIG1-216ENST00000598938 MRPL53Q96EL3 112 aaKnown RBP13.32□□□□□ -0.28
LIG1-216ENST00000598938 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
LIG1-216ENST00000598938 ZMAT4Q9H898 229 aa13.32□□□□□ -0.28
LIG1-216ENST00000598938 PRELID1Q9Y255 219 aa13.32□□□□□ -0.28
LIG1-216ENST00000598938 SACSQ9NZJ4 4579 aa13.31□□□□□ -0.28
LIG1-216ENST00000598938 ZNF705FA8MVS1 300 aaPredicted RBP13.31□□□□□ -0.28
LIG1-216ENST00000598938 UMAD1C9J7I0 102 aa13.31□□□□□ -0.28
LIG1-216ENST00000598938 NKX2-5P52952 324 aaPredicted RBP13.31□□□□□ -0.28
LIG1-216ENST00000598938 Q6ZWC4 215 aa13.31□□□□□ -0.28
LIG1-216ENST00000598938 LYPD1Q8N2G4 141 aa13.31□□□□□ -0.28
LIG1-216ENST00000598938 EXOC3-AS1Q8N2X6 119 aa13.31□□□□□ -0.28
LIG1-216ENST00000598938 OR8A1Q8NGG7 326 aa13.31□□□□□ -0.28
LIG1-216ENST00000598938 SUN5Q8TC36 379 aa13.31□□□□□ -0.28
LIG1-216ENST00000598938 TMED6Q8WW62 240 aa13.31□□□□□ -0.28
LIG1-216ENST00000598938 AGRNO00468 2067 aa13.3□□□□□ -0.28
LIG1-216ENST00000598938 DUSP14O95147 198 aaKnown RBP13.3□□□□□ -0.28
LIG1-216ENST00000598938 CXorf1O96002 111 aa13.3□□□□□ -0.28
LIG1-216ENST00000598938 CA1P00915 261 aaPredicted RBP13.3□□□□□ -0.28
LIG1-216ENST00000598938 GIG44P09565 113 aaPredicted RBP13.3□□□□□ -0.28
LIG1-216ENST00000598938 GCHFRP30047 84 aa13.3□□□□□ -0.28
LIG1-216ENST00000598938 ICAM4Q14773 271 aa13.3□□□□□ -0.28
LIG1-216ENST00000598938 OR4B1Q8NGF8 309 aa13.3□□□□□ -0.28
LIG1-216ENST00000598938 AAMDCQ9H7C9 122 aa13.3□□□□□ -0.28
LIG1-216ENST00000598938 RETNQ9HD89 108 aa13.3□□□□□ -0.28
LIG1-216ENST00000598938 PRAC2D3DTV9 90 aa13.29□□□□□ -0.28
LIG1-216ENST00000598938 M0R3E3 92 aa13.29□□□□□ -0.28
LIG1-216ENST00000598938 IGKV3-20P01619 116 aa13.29□□□□□ -0.28
LIG1-216ENST00000598938 ZNF705DP0CH99 300 aaPredicted RBP13.29□□□□□ -0.28
LIG1-216ENST00000598938 ZNF705BP0CI00 300 aaPredicted RBP13.29□□□□□ -0.28
LIG1-216ENST00000598938 CNN1P51911 297 aaKnown RBP13.29□□□□□ -0.28
LIG1-216ENST00000598938 RANP62826 216 aaKnown RBP13.29□□□□□ -0.28
LIG1-216ENST00000598938 Q9H3A6 140 aa13.29□□□□□ -0.28
LIG1-216ENST00000598938 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
LIG1-216ENST00000598938 PRB4P10163 310 aaPredicted RBP13.28□□□□□ -0.28
LIG1-216ENST00000598938 FHITP49789 147 aa13.28□□□□□ -0.28
LIG1-216ENST00000598938 NUTF2P61970 127 aaKnown RBP13.28□□□□□ -0.28
LIG1-216ENST00000598938 HIST1H1AQ02539 215 aaPredicted RBP13.28□□□□□ -0.28
LIG1-216ENST00000598938 DEFB135Q30KP9 77 aa13.28□□□□□ -0.28
LIG1-216ENST00000598938 EIF5AL1Q6IS14 154 aaKnown RBP13.28□□□□□ -0.28
LIG1-216ENST00000598938 AMTNQ6UX39 209 aa13.28□□□□□ -0.28
LIG1-216ENST00000598938 DPPA3Q6W0C5 159 aa13.28□□□□□ -0.28
LIG1-216ENST00000598938 RNF183Q96D59 192 aa13.28□□□□□ -0.28
LIG1-216ENST00000598938 OVOL2Q9BRP0 275 aa13.28□□□□□ -0.28
LIG1-216ENST00000598938 TMEM167BQ9NRX6 74 aa13.28□□□□□ -0.28
LIG1-216ENST00000598938 LYSTQ99698 3801 aa13.27□□□□□ -0.28
LIG1-216ENST00000598938 MAP1LC3B2A6NCE7 125 aa13.27□□□□□ -0.29
LIG1-216ENST00000598938 FAM213BQ8TBF2 198 aa13.27□□□□□ -0.29
LIG1-216ENST00000598938 MAP1LC3BQ9GZQ8 125 aa13.27□□□□□ -0.29
LIG1-216ENST00000598938 SPRY2O43597 315 aa13.26□□□□□ -0.29
LIG1-216ENST00000598938 OR10J6PQ8NGY7 276 aa13.26□□□□□ -0.29
LIG1-216ENST00000598938 MBD3L1Q8WWY6 194 aa13.26□□□□□ -0.29
LIG1-216ENST00000598938 SLC35B3Q9H1N7 401 aa13.26□□□□□ -0.29
LIG1-216ENST00000598938 OTORQ9NRC9 128 aa13.26□□□□□ -0.29
LIG1-216ENST00000598938 NPIPB6E9PJ23 425 aa13.25□□□□□ -0.29
LIG1-216ENST00000598938 RAB5CP51148 216 aa13.25□□□□□ -0.29
LIG1-216ENST00000598938 FGF8P55075 233 aaPredicted RBP13.25□□□□□ -0.29
LIG1-216ENST00000598938 CSNK1G2-AS1Q8NCQ2 148 aa13.25□□□□□ -0.29
LIG1-216ENST00000598938 C1QTNF4Q9BXJ3 329 aa13.25□□□□□ -0.29
LIG1-216ENST00000598938 BOLA1Q9Y3E2 137 aa13.25□□□□□ -0.29
LIG1-216ENST00000598938 SULT1A2P50226 295 aa13.24□□□□□ -0.29
LIG1-216ENST00000598938 FXYD7P58549 80 aa13.24□□□□□ -0.29
LIG1-216ENST00000598938 IQCF2Q8IXL9 164 aa13.24□□□□□ -0.29
LIG1-216ENST00000598938 TMPRSS5Q9H3S3 457 aa13.24□□□□□ -0.29
LIG1-216ENST00000598938 XCL2Q9UBD3 114 aa13.24□□□□□ -0.29
LIG1-216ENST00000598938 DNAH1Q9P2D7 4330 aa13.24□□□□□ -0.29
LIG1-216ENST00000598938 CSMD3Q7Z407 3707 aa13.24□□□□□ -0.29
LIG1-216ENST00000598938 PGPA6NDG6 321 aa13.23□□□□□ -0.29
LIG1-216ENST00000598938 BOLA2-SMG1P6H3BVE0 249 aa13.23□□□□□ -0.29
LIG1-216ENST00000598938 CSN1S1P47710 185 aa13.23□□□□□ -0.29
LIG1-216ENST00000598938 FAM74A1Q5RGS3 127 aa13.23□□□□□ -0.29
LIG1-216ENST00000598938 ARL6IP6Q8N6S5 226 aa13.23□□□□□ -0.29
LIG1-216ENST00000598938 IGKV2-40A0A087WW87 121 aaPredicted RBP13.22□□□□□ -0.29
LIG1-216ENST00000598938 IGKV2D-40P01614 121 aaPredicted RBP13.22□□□□□ -0.29
LIG1-216ENST00000598938 AMBPP02760 352 aa13.22□□□□□ -0.29
LIG1-216ENST00000598938 H2AFB1P0C5Y9 115 aa13.22□□□□□ -0.29
LIG1-216ENST00000598938 RXFP4Q8TDU9 374 aa13.22□□□□□ -0.29
LIG1-216ENST00000598938 SFT2D1Q8WV19 159 aa13.22□□□□□ -0.29
LIG1-216ENST00000598938 ODF3Q96PU9 254 aa13.22□□□□□ -0.29
LIG1-216ENST00000598938 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
LIG1-216ENST00000598938 RBAKDNA6NC62 111 aa13.21□□□□□ -0.29
LIG1-216ENST00000598938 GGTLC3B5MD39 225 aa13.21□□□□□ -0.29
LIG1-216ENST00000598938 DIRC3C9JPN6 131 aa13.21□□□□□ -0.29
LIG1-216ENST00000598938 M0R2Z0 102 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms