RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 RNF141Q8WVD5 230 aa12.68□□□□□ -0.38
USHBP1-209ENST00000598570 FAM19A4Q96LR4 140 aa12.68□□□□□ -0.38
USHBP1-209ENST00000598570 FXYD7P58549 80 aa12.67□□□□□ -0.38
USHBP1-209ENST00000598570 ACOT6Q3I5F7 207 aaPredicted RBP12.67□□□□□ -0.38
USHBP1-209ENST00000598570 C11orf45Q8TAV5 145 aa12.67□□□□□ -0.38
USHBP1-209ENST00000598570 PAXXQ9BUH6 204 aa12.67□□□□□ -0.38
USHBP1-209ENST00000598570 TMEM189A5PLL7 270 aa12.66□□□□□ -0.38
USHBP1-209ENST00000598570 HIST1H1AQ02539 215 aaPredicted RBP12.66□□□□□ -0.38
USHBP1-209ENST00000598570 RPP25LQ8N5L8 163 aaKnown RBP12.66□□□□□ -0.38
USHBP1-209ENST00000598570 ARL6IP6Q8N6S5 226 aa12.66□□□□□ -0.38
USHBP1-209ENST00000598570 GOLT1BQ9Y3E0 138 aa12.66□□□□□ -0.38
USHBP1-209ENST00000598570 PLECQ15149 4684 aaKnown RBP12.65□□□□□ -0.38
USHBP1-209ENST00000598570 LCE6AA0A183 80 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 NUPR2A6NF83 97 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 HMSDA8MTL9 139 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 M0R2Z0 102 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 TAAR5O14804 337 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 DEFB4AO15263 64 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 CT45A10P0DMU9 189 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 ATP6V0CP27449 155 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 TSPOP30536 169 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 SPINK13Q1W4C9 94 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 KHDC3LQ587J8 217 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 C9orf47Q6ZRZ4 202 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 OR10J6PQ8NGY7 276 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 C20orf144Q9BQM9 153 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 CYTL1Q9NRR1 136 aa12.65□□□□□ -0.38
USHBP1-209ENST00000598570 RYR2Q92736 4967 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 FXYD6-FXYD2A0A087WZ82 144 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 M0R3E3 92 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 NMBP08949 121 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 CDKN1BP46527 198 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 TAS2R45P59539 299 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 ZNF345Q14585 488 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 RPL7L1Q6DKI1 246 aaKnown RBP12.64□□□□□ -0.39
USHBP1-209ENST00000598570 Q6ZNX1 250 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 PQLC2Q6ZP29 291 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 TMEM256Q8N2U0 113 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 EXOC3-AS1Q8N2X6 119 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 GNPNAT1Q96EK6 184 aaPredicted RBP12.64□□□□□ -0.39
USHBP1-209ENST00000598570 LINC00477Q96M19 166 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 PPP1R14DQ9NXH3 145 aa12.64□□□□□ -0.39
USHBP1-209ENST00000598570 TRBV7-9A0A0J9YWB2 115 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 INSP01308 110 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 MBP02144 154 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 OR10J4P0C629 311 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 NANOS2P60321 138 aaKnown RBP12.63□□□□□ -0.39
USHBP1-209ENST00000598570 RAB2AP61019 212 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 HSD17B11Q8NBQ5 300 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 OR11H4Q8NGC9 324 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 OR10G4Q8NGN3 311 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 OR10G9Q8NGN4 311 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 OR10G7Q8NGN6 311 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 PHLDA1Q8WV24 401 aaPredicted RBP12.63□□□□□ -0.39
USHBP1-209ENST00000598570 AGPAT4-IT1Q9H0P7 198 aa12.63□□□□□ -0.39
USHBP1-209ENST00000598570 SACSQ9NZJ4 4579 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 RBAKDNA6NC62 111 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 JTBO76095 146 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 CRISP2P16562 243 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 ICAM4Q14773 271 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 PHYHIPLQ96FC7 376 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 AAMDCQ9H7C9 122 aa12.62□□□□□ -0.39
USHBP1-209ENST00000598570 DNAH1Q9P2D7 4330 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 BORCS7-ASMTA0A0B4J1R7 106 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 PLAC8L1A1L4L8 177 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 KLLNB2CW77 178 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 C11orf94C9JXX5 98 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 OR7C2O60412 319 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 SLC25A5P05141 298 aaKnown RBP12.61□□□□□ -0.39
USHBP1-209ENST00000598570 BAP18Q8IXM2 172 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 KCNRGQ8N5I3 272 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 SH3BGRL3Q9H299 93 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 DKK2Q9UBU2 259 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 CELA1Q9UNI1 258 aa12.61□□□□□ -0.39
USHBP1-209ENST00000598570 A0A1W2PPV4 95 aa12.6□□□□□ -0.39
USHBP1-209ENST00000598570 CXorf65A6NEN9 183 aa12.6□□□□□ -0.39
USHBP1-209ENST00000598570 HBE1P02100 147 aa12.6□□□□□ -0.39
USHBP1-209ENST00000598570 TAS2R60P59551 318 aa12.6□□□□□ -0.39
USHBP1-209ENST00000598570 RRN3P1Q2M238 152 aa12.6□□□□□ -0.39
USHBP1-209ENST00000598570 RAB24Q969Q5 203 aa12.6□□□□□ -0.39
USHBP1-209ENST00000598570 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
USHBP1-209ENST00000598570 TRAV12-2A0A075B6T6 113 aa12.59□□□□□ -0.39
USHBP1-209ENST00000598570 TEX48A0A1B0GUV7 120 aa12.59□□□□□ -0.39
USHBP1-209ENST00000598570 SMLR1H3BR10 107 aa12.59□□□□□ -0.39
USHBP1-209ENST00000598570 ARPC5O15511 151 aa12.59□□□□□ -0.39
USHBP1-209ENST00000598570 TCTAP57738 103 aa12.59□□□□□ -0.39
USHBP1-209ENST00000598570 UBE2L3P68036 154 aaKnown RBP12.59□□□□□ -0.39
USHBP1-209ENST00000598570 KIR3DS1Q14943 382 aa12.59□□□□□ -0.39
USHBP1-209ENST00000598570 LINC00467Q9BRT7 94 aa12.59□□□□□ -0.39
USHBP1-209ENST00000598570 Q9H3A6 140 aa12.59□□□□□ -0.39
USHBP1-209ENST00000598570 KLK5Q9Y337 293 aaPredicted RBP12.59□□□□□ -0.39
USHBP1-209ENST00000598570 LOC102723971A0A1B0GUV8 181 aa12.58□□□□□ -0.4
USHBP1-209ENST00000598570 ZNF324O75467 553 aaPredicted RBP12.58□□□□□ -0.4
USHBP1-209ENST00000598570 SPART-AS1P0CW21 52 aa12.58□□□□□ -0.4
USHBP1-209ENST00000598570 PRB4P10163 310 aaPredicted RBP12.58□□□□□ -0.4
USHBP1-209ENST00000598570 LEPP41159 167 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms