RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 K7EPK0 472 aa11.94□□□□□ -0.5
PNKP-210ENST00000597965 HYPMO75409 117 aa11.94□□□□□ -0.5
PNKP-210ENST00000597965 PET100P0DJ07 73 aa11.94□□□□□ -0.5
PNKP-210ENST00000597965 TNP2Q05952 138 aa11.94□□□□□ -0.5
PNKP-210ENST00000597965 BAP18Q8IXM2 172 aa11.94□□□□□ -0.5
PNKP-210ENST00000597965 RNF182Q8N6D2 247 aa11.94□□□□□ -0.5
PNKP-210ENST00000597965 OR10J6PQ8NGY7 276 aa11.94□□□□□ -0.5
PNKP-210ENST00000597965 SHANK2-AS3Q9BTD1 123 aa11.94□□□□□ -0.5
PNKP-210ENST00000597965 ARL6Q9H0F7 186 aa11.94□□□□□ -0.5
PNKP-210ENST00000597965 TRAV8-2A0A0B4J237 113 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 H3BRN7 92 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 RLN2P04090 185 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 GATA2P23769 480 aaPredicted RBP11.93□□□□□ -0.5
PNKP-210ENST00000597965 S100A10P60903 97 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 HIST1H1AQ02539 215 aaPredicted RBP11.93□□□□□ -0.5
PNKP-210ENST00000597965 TTC32Q5I0X7 151 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 TEX261Q6UWH6 196 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 CYP2G1PQ6ZSU1 146 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 INO80EQ8NBZ0 244 aaPredicted RBP11.93□□□□□ -0.5
PNKP-210ENST00000597965 OR8A1Q8NGG7 326 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 C17orf77Q96MU5 243 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 C11orf1Q9H5F2 150 aa11.93□□□□□ -0.5
PNKP-210ENST00000597965 TRAV12-2A0A075B6T6 113 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 SMCO3A2RU48 225 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 HTN1P15515 57 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 CDKN1BP46527 198 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 PLP1P60201 277 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 ID3Q02535 119 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 MAPKAPK5-AS1Q8N8E1 139 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 ZNF680Q8NEM1 530 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 TMEM263Q8WUH6 116 aaKnown RBP11.92□□□□□ -0.5
PNKP-210ENST00000597965 AQP10Q96PS8 301 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 C20orf144Q9BQM9 153 aa11.92□□□□□ -0.5
PNKP-210ENST00000597965 LSM5Q9Y4Y9 91 aaKnown RBP11.92□□□□□ -0.5
PNKP-210ENST00000597965 A0A087X0K7 114 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 PLAC8L1A1L4L8 177 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 H7BYZ3 331 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 BCL2L11O43521 198 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 SCGB1D2O95969 90 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 OR5G3P0C626 314 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 LINC00869P0C866 280 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 PSG3Q16557 428 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 PXDC1Q5TGL8 231 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 IGFL4Q6B9Z1 124 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 TMEM182Q6ZP80 229 aaPredicted RBP11.91□□□□□ -0.5
PNKP-210ENST00000597965 ZNF503Q96F45 646 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 LINC00588Q9Y4M8 146 aa11.91□□□□□ -0.5
PNKP-210ENST00000597965 E5RGE8 158 aa11.9□□□□□ -0.5
PNKP-210ENST00000597965 H3BP45 60 aa11.9□□□□□ -0.5
PNKP-210ENST00000597965 PRM2P04554 102 aa11.9□□□□□ -0.5
PNKP-210ENST00000597965 AZU1P20160 251 aa11.9□□□□□ -0.5
PNKP-210ENST00000597965 BTF3P20290 206 aaKnown RBP11.9□□□□□ -0.5
PNKP-210ENST00000597965 SSX7Q7RTT5 188 aa11.9□□□□□ -0.5
PNKP-210ENST00000597965 SLC51BQ86UW2 128 aa11.9□□□□□ -0.5
PNKP-210ENST00000597965 CCDC28AQ8IWP9 274 aa11.9□□□□□ -0.5
PNKP-210ENST00000597965 Q9H8V8 135 aa11.9□□□□□ -0.5
PNKP-210ENST00000597965 RCL1Q9Y2P8 373 aaKnown RBP11.9□□□□□ -0.5
PNKP-210ENST00000597965 KANTRA0A1W2PQU2 76 aa11.89□□□□□ -0.51
PNKP-210ENST00000597965 FNDC10F2Z333 226 aa11.89□□□□□ -0.51
PNKP-210ENST00000597965 LCN15Q6UWW0 184 aa11.89□□□□□ -0.51
PNKP-210ENST00000597965 RNF141Q8WVD5 230 aa11.89□□□□□ -0.51
PNKP-210ENST00000597965 GNPNAT1Q96EK6 184 aaPredicted RBP11.89□□□□□ -0.51
PNKP-210ENST00000597965 SLC50A1Q9BRV3 221 aa11.89□□□□□ -0.51
PNKP-210ENST00000597965 NPVFQ9HCQ7 196 aa11.89□□□□□ -0.51
PNKP-210ENST00000597965 PSENENQ9NZ42 101 aa11.89□□□□□ -0.51
PNKP-210ENST00000597965 A0A1W2PPQ1 181 aa11.88□□□□□ -0.51
PNKP-210ENST00000597965 IFNA7P01567 189 aa11.88□□□□□ -0.51
PNKP-210ENST00000597965 M6PRP20645 277 aa11.88□□□□□ -0.51
PNKP-210ENST00000597965 RPL12P30050 165 aaKnown RBP11.88□□□□□ -0.51
PNKP-210ENST00000597965 POLR2GP62487 172 aaKnown RBP eCLIP11.88□□□□□ -0.51
PNKP-210ENST00000597965 RNASE8Q8TDE3 154 aaKnown RBP11.88□□□□□ -0.51
PNKP-210ENST00000597965 RPUSD4Q96CM3 377 aaKnown RBP11.88□□□□□ -0.51
PNKP-210ENST00000597965 ARPC5LQ9BPX5 153 aa11.88□□□□□ -0.51
PNKP-210ENST00000597965 KRTAP4-5Q9BYR2 181 aa11.88□□□□□ -0.51
PNKP-210ENST00000597965 NOP10Q9NPE3 64 aaKnown RBP11.88□□□□□ -0.51
PNKP-210ENST00000597965 CYTL1Q9NRR1 136 aa11.88□□□□□ -0.51
PNKP-210ENST00000597965 DLK1P80370 383 aa11.87□□□□□ -0.51
PNKP-210ENST00000597965 OR5I1Q13606 314 aa11.87□□□□□ -0.51
PNKP-210ENST00000597965 NDUFA5Q16718 116 aa11.87□□□□□ -0.51
PNKP-210ENST00000597965 TEPPQ6URK8 271 aa11.87□□□□□ -0.51
PNKP-210ENST00000597965 OR10P1Q8NGE3 313 aa11.87□□□□□ -0.51
PNKP-210ENST00000597965 SMIM8Q96KF7 97 aa11.87□□□□□ -0.51
PNKP-210ENST00000597965 UHRF2Q96PU4 802 aa11.87□□□□□ -0.51
PNKP-210ENST00000597965 ARV1Q9H2C2 271 aa11.87□□□□□ -0.51
PNKP-210ENST00000597965 H3BNG1 76 aa11.86□□□□□ -0.51
PNKP-210ENST00000597965 BPIFA4PQ86YQ2 179 aa11.86□□□□□ -0.51
PNKP-210ENST00000597965 RXFP4Q8TDU9 374 aa11.86□□□□□ -0.51
PNKP-210ENST00000597965 Q9H3A6 140 aa11.86□□□□□ -0.51
PNKP-210ENST00000597965 HSPG2P98160 4391 aa11.86□□□□□ -0.51
PNKP-210ENST00000597965 TRAV26-1A0A087WT03 109 aa11.85□□□□□ -0.51
PNKP-210ENST00000597965 PMS2P5A8MQ11 134 aa11.85□□□□□ -0.51
PNKP-210ENST00000597965 SNURFLB1AK76 121 aa11.85□□□□□ -0.51
PNKP-210ENST00000597965 TAAR5O14804 337 aa11.85□□□□□ -0.51
PNKP-210ENST00000597965 PVALBP20472 110 aaPredicted RBP11.85□□□□□ -0.51
PNKP-210ENST00000597965 SPATA12Q7Z6I5 190 aa11.85□□□□□ -0.51
PNKP-210ENST00000597965 Q8N1X5 172 aa11.85□□□□□ -0.51
PNKP-210ENST00000597965 UPK3BQ9BT76 320 aa11.85□□□□□ -0.51
PNKP-210ENST00000597965 ZNF471Q9BX82 626 aaPredicted RBP11.85□□□□□ -0.51
PNKP-210ENST00000597965 ZNF331Q9NQX6 463 aaPredicted RBP11.85□□□□□ -0.51
PNKP-210ENST00000597965 FAM24AA6NFZ4 105 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms