RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 Q8N814 137 aa6.81□□□□□ -1.32
TRIM28-210ENST00000597618 OR51S1Q8NGJ8 323 aa6.81□□□□□ -1.32
TRIM28-210ENST00000597618 LINC00854A0A1B0GVQ3 168 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 PRAC2D3DTV9 90 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 SYNGR2O43760 224 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 SPINK4O60575 86 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 OXTP01178 125 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 IGHV3-53P01767 116 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 CT45A10P0DMU9 189 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 SRIP30626 198 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 CRYBA4P53673 196 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 TCL1AP56279 114 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 ANXA2RQ3ZCQ2 193 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 SPANXN5Q5MJ07 72 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 TEPPQ6URK8 271 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 CLVS1Q8IUQ0 354 aaPredicted RBP6.8□□□□□ -1.32
TRIM28-210ENST00000597618 ZBTB8BQ8NAP8 495 aaPredicted RBP6.8□□□□□ -1.32
TRIM28-210ENST00000597618 ZNF431Q8TF32 576 aaPredicted RBP6.8□□□□□ -1.32
TRIM28-210ENST00000597618 SMIM4Q8WVI0 70 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 VGLL1Q99990 258 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 ARV1Q9H2C2 271 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 SCP2D1Q9UJQ7 156 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 HHLA3Q9XRX5 114 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 STRAPQ9Y3F4 350 aaKnown RBP6.8□□□□□ -1.32
TRIM28-210ENST00000597618 PXMP4Q9Y6I8 212 aa6.8□□□□□ -1.32
TRIM28-210ENST00000597618 TRAV5A0A0B4J249 113 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 C7orf71A4D174 169 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 WRBO00258 174 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 SLC17A3O00476 420 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 PRAF2O60831 178 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 SLC25A5P05141 298 aaKnown RBP6.79□□□□□ -1.32
TRIM28-210ENST00000597618 Q6ZSA8 131 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 BPIFA4PQ86YQ2 179 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 EIF4E3Q8N5X7 224 aaKnown RBP6.79□□□□□ -1.32
TRIM28-210ENST00000597618 LRTM2Q8N967 370 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 PCNPQ8WW12 178 aaKnown RBP6.79□□□□□ -1.32
TRIM28-210ENST00000597618 C8orf49Q96NF6 230 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 FUNDC2Q9BWH2 189 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 ARL6Q9H0F7 186 aa6.79□□□□□ -1.32
TRIM28-210ENST00000597618 H3BP45 60 aa6.78□□□□□ -1.32
TRIM28-210ENST00000597618 K7EPK0 472 aa6.78□□□□□ -1.32
TRIM28-210ENST00000597618 K7EQD1 137 aa6.78□□□□□ -1.32
TRIM28-210ENST00000597618 C4orf46Q504U0 113 aa6.78□□□□□ -1.32
TRIM28-210ENST00000597618 IBA57Q5T440 356 aaKnown RBP6.78□□□□□ -1.32
TRIM28-210ENST00000597618 PXDC1Q5TGL8 231 aa6.78□□□□□ -1.32
TRIM28-210ENST00000597618 PATE2Q6UY27 113 aa6.78□□□□□ -1.32
TRIM28-210ENST00000597618 LINC00305Q7Z4B0 112 aa6.78□□□□□ -1.32
TRIM28-210ENST00000597618 RCL1Q9Y2P8 373 aaKnown RBP6.78□□□□□ -1.32
TRIM28-210ENST00000597618 KLF12Q9Y4X4 402 aa6.78□□□□□ -1.32
TRIM28-210ENST00000597618 A0A087WXM4 84 aa6.77□□□□□ -1.33
TRIM28-210ENST00000597618 SNRPCP09234 159 aaKnown RBP6.77□□□□□ -1.33
TRIM28-210ENST00000597618 FHL2Q14192 279 aa6.77□□□□□ -1.33
TRIM28-210ENST00000597618 MRPL32Q9BYC8 188 aaKnown RBP6.77□□□□□ -1.33
TRIM28-210ENST00000597618 MRPL16Q9NX20 251 aaKnown RBP6.77□□□□□ -1.33
TRIM28-210ENST00000597618 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
TRIM28-210ENST00000597618 TRGV4A0A0C4DH28 118 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 ANKRD20A5PA0PJZ0 165 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 KLLNB2CW77 178 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 E5RGE8 158 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 H3BTX0 84 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 CTDSPLO15194 276 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 MPDU1O75352 247 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 ORM1P02763 201 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 IGLC2P0DOY2 106 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 SLC38A11Q08AI6 406 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 ZNF415Q09FC8 603 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 BTN1A1Q13410 526 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 GUK1Q16774 197 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 ZNF546Q86UE3 836 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 TXNDC17Q9BRA2 123 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 MCUBQ9NWR8 336 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 RABL2BQ9UNT1 228 aa6.76□□□□□ -1.33
TRIM28-210ENST00000597618 IGHV3-38A0A0C4DH36 116 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 FNDC10F2Z333 226 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 RGS13O14921 159 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 RGS5O15539 181 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 COX7A2P2O60397 106 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 ATP6V1G2O95670 118 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 GYPEP15421 78 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 CD300CQ08708 224 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 TMEM128Q5BJH2 165 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 LINC01556Q5JQF7 62 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 IQCF2Q8IXL9 164 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 SAT2Q96F10 170 aaPredicted RBP6.75□□□□□ -1.33
TRIM28-210ENST00000597618 ARPC5LQ9BPX5 153 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 MIXL1Q9H2W2 232 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 NPVFQ9HCQ7 196 aa6.75□□□□□ -1.33
TRIM28-210ENST00000597618 RABL2AQ9UBK7 228 aaPredicted RBP6.75□□□□□ -1.33
TRIM28-210ENST00000597618 LRP2P98164 4655 aa6.74□□□□□ -1.33
TRIM28-210ENST00000597618 IBA57-AS1B1ANH7 110 aa6.74□□□□□ -1.33
TRIM28-210ENST00000597618 C9JCJ5 164 aa6.74□□□□□ -1.33
TRIM28-210ENST00000597618 H3BQ15 152 aa6.74□□□□□ -1.33
TRIM28-210ENST00000597618 GOSR2O14653 212 aa6.74□□□□□ -1.33
TRIM28-210ENST00000597618 OR4E1P0C645 316 aa6.74□□□□□ -1.33
TRIM28-210ENST00000597618 VAMP1P23763 118 aa6.74□□□□□ -1.33
TRIM28-210ENST00000597618 RNASE4P34096 147 aaKnown RBP6.74□□□□□ -1.33
TRIM28-210ENST00000597618 RRAS2P62070 204 aaPredicted RBP6.74□□□□□ -1.33
TRIM28-210ENST00000597618 IL18Q14116 193 aa6.74□□□□□ -1.33
TRIM28-210ENST00000597618 OPCMLQ14982 345 aa6.74□□□□□ -1.33
TRIM28-210ENST00000597618 SH2D6Q7Z4S9 175 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms