RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 TMEM252Q8N6L7 170 aa10.82□□□□□ -0.68
LIG1-214ENST00000597146 OR1L4Q8NGR5 311 aa10.82□□□□□ -0.68
LIG1-214ENST00000597146 LYRM2Q9NU23 88 aaPredicted RBP10.82□□□□□ -0.68
LIG1-214ENST00000597146 A0A0J9YX75 114 aa10.81□□□□□ -0.68
LIG1-214ENST00000597146 NUDT3O95989 172 aa10.81□□□□□ -0.68
LIG1-214ENST00000597146 DAD1P61803 113 aa10.81□□□□□ -0.68
LIG1-214ENST00000597146 IFITM3Q01628 133 aa10.81□□□□□ -0.68
LIG1-214ENST00000597146 BPIFA4PQ86YQ2 179 aa10.81□□□□□ -0.68
LIG1-214ENST00000597146 MGST2Q99735 147 aa10.81□□□□□ -0.68
LIG1-214ENST00000597146 UBE2L5PA0A1B0GUS4 154 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 IGSF23A1L1A6 192 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 E5RGE8 158 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 SMR3BP02814 79 aaPredicted RBP10.8□□□□□ -0.68
LIG1-214ENST00000597146 BTF3P20290 206 aaKnown RBP10.8□□□□□ -0.68
LIG1-214ENST00000597146 FGF7P21781 194 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 PATE2Q6UY27 113 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 RNF182Q8N6D2 247 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 ZNF709Q8N972 641 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 C20orf173Q96LM9 149 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 CLUHP3Q96NS8 147 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 PFDN5Q99471 154 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 NMES1Q9C002 83 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 SLC35B3Q9H1N7 401 aa10.8□□□□□ -0.68
LIG1-214ENST00000597146 LOC102723971A0A1B0GUV8 181 aa10.79□□□□□ -0.68
LIG1-214ENST00000597146 SNRPCP09234 159 aaKnown RBP10.79□□□□□ -0.68
LIG1-214ENST00000597146 IL15RAQ13261 267 aa10.79□□□□□ -0.68
LIG1-214ENST00000597146 MIC13Q5XKP0 118 aa10.79□□□□□ -0.68
LIG1-214ENST00000597146 MARVELD1Q9BSK0 173 aa10.79□□□□□ -0.68
LIG1-214ENST00000597146 WDR83OSQ9Y284 106 aa10.79□□□□□ -0.68
LIG1-214ENST00000597146 HBE1P02100 147 aa10.78□□□□□ -0.68
LIG1-214ENST00000597146 CNN1P51911 297 aaKnown RBP10.78□□□□□ -0.68
LIG1-214ENST00000597146 CCL18P55774 89 aa10.78□□□□□ -0.68
LIG1-214ENST00000597146 HIST1H1AQ02539 215 aaPredicted RBP10.78□□□□□ -0.68
LIG1-214ENST00000597146 NHLH2Q02577 135 aa10.78□□□□□ -0.68
LIG1-214ENST00000597146 PSG3Q16557 428 aa10.78□□□□□ -0.68
LIG1-214ENST00000597146 SLC39A9Q9NUM3 307 aa10.78□□□□□ -0.68
LIG1-214ENST00000597146 MPDU1O75352 247 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 PET100P0DJ07 73 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 RPL29P47914 159 aaKnown RBP10.77□□□□□ -0.69
LIG1-214ENST00000597146 B2MP61769 119 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 LCN15Q6UWW0 184 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 OR5C1Q8NGR4 320 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 TMEM37Q8WXS4 190 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 C17orf77Q96MU5 243 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 SLC50A1Q9BRV3 221 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 C11orf1Q9H5F2 150 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 PXMP4Q9Y6I8 212 aa10.77□□□□□ -0.69
LIG1-214ENST00000597146 A0A087X0K7 114 aa10.76□□□□□ -0.69
LIG1-214ENST00000597146 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
LIG1-214ENST00000597146 CXCL3P19876 107 aa10.76□□□□□ -0.69
LIG1-214ENST00000597146 CLINT1Q14677 625 aa10.76□□□□□ -0.69
LIG1-214ENST00000597146 RRN3P1Q2M238 152 aa10.76□□□□□ -0.69
LIG1-214ENST00000597146 SSX7Q7RTT5 188 aa10.76□□□□□ -0.69
LIG1-214ENST00000597146 OR10J6PQ8NGY7 276 aa10.76□□□□□ -0.69
LIG1-214ENST00000597146 RPUSD4Q96CM3 377 aaKnown RBP10.76□□□□□ -0.69
LIG1-214ENST00000597146 Q9H8V8 135 aa10.76□□□□□ -0.69
LIG1-214ENST00000597146 TRAV5A0A0B4J249 113 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 H3BTX0 84 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 CXCL2P19875 107 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 HAMPP81172 84 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 OPCMLQ14982 345 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 GUK1Q16774 197 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 SPINK13Q1W4C9 94 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 VWC2Q2TAL6 325 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 TTC32Q5I0X7 151 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 C1orf158Q8N1D5 194 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 OR8A1Q8NGG7 326 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 THAP6Q8TBB0 222 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 SCGB1C1Q8TD33 95 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 PPP1R1CQ8WVI7 109 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 OR5AC2Q9NZP5 309 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 TIMM9Q9Y5J7 89 aa10.75□□□□□ -0.69
LIG1-214ENST00000597146 C17orf112F2Z3M2 114 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 F5H768 121 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 INSP01308 110 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 IFNA5P01569 189 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 KRTAP10-1P60331 282 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 Q6ZSN1 163 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 OR11H7Q8NGC8 314 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 RNF141Q8WVD5 230 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 LINC01587Q99440 93 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 Q9H3A6 140 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 KCNIP2Q9NS61 270 aa10.74□□□□□ -0.69
LIG1-214ENST00000597146 M0R2Z0 102 aa10.73□□□□□ -0.69
LIG1-214ENST00000597146 HTN1P15515 57 aa10.73□□□□□ -0.69
LIG1-214ENST00000597146 ZNF331Q9NQX6 463 aaPredicted RBP10.73□□□□□ -0.69
LIG1-214ENST00000597146 LRP1Q07954 4544 aaKnown RBP10.72□□□□□ -0.69
LIG1-214ENST00000597146 BOLA2-SMG1P6H3BVE0 249 aa10.72□□□□□ -0.69
LIG1-214ENST00000597146 PRB4P10163 310 aaPredicted RBP10.72□□□□□ -0.69
LIG1-214ENST00000597146 TSPOP30536 169 aa10.72□□□□□ -0.69
LIG1-214ENST00000597146 H2BFSP57053 126 aa10.72□□□□□ -0.69
LIG1-214ENST00000597146 MORN5Q5VZ52 161 aa10.72□□□□□ -0.69
LIG1-214ENST00000597146 CHAC2Q8WUX2 184 aa10.72□□□□□ -0.69
LIG1-214ENST00000597146 NPCDR1Q9BY65 106 aa10.72□□□□□ -0.69
LIG1-214ENST00000597146 TRAV12-2A0A075B6T6 113 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 ZNF705GA8MUZ8 300 aaPredicted RBP10.71□□□□□ -0.69
LIG1-214ENST00000597146 H0YIZ8 118 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 H3BQ15 152 aa10.71□□□□□ -0.69
LIG1-214ENST00000597146 MPC2O95563 127 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms