RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 BOLA2-SMG1P6H3BVE0 249 aa12.97□□□□□ -0.33
CIRBP-237ENST00000592234 H2BFSP57053 126 aa12.97□□□□□ -0.33
CIRBP-237ENST00000592234 PSG3Q16557 428 aa12.97□□□□□ -0.33
CIRBP-237ENST00000592234 BPIFA4PQ86YQ2 179 aa12.97□□□□□ -0.33
CIRBP-237ENST00000592234 THAP6Q8TBB0 222 aa12.97□□□□□ -0.33
CIRBP-237ENST00000592234 DNAJC4Q9NNZ3 241 aa12.97□□□□□ -0.33
CIRBP-237ENST00000592234 SLC39A9Q9NUM3 307 aa12.97□□□□□ -0.33
CIRBP-237ENST00000592234 E5RGE8 158 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 CLINT1Q14677 625 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 ATP6V1FQ16864 119 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 Q6ZR54 194 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 C15orf53Q8NAA6 179 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 OR8A1Q8NGG7 326 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 OR5C1Q8NGR4 320 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 OR1L4Q8NGR5 311 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 RNF24Q9Y225 148 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 PXMP4Q9Y6I8 212 aa12.96□□□□□ -0.33
CIRBP-237ENST00000592234 DYNC1H1Q14204 4646 aaKnown RBP12.95□□□□□ -0.34
CIRBP-237ENST00000592234 PKD1P98161 4303 aa12.95□□□□□ -0.34
CIRBP-237ENST00000592234 SLC17A3O00476 420 aa12.95□□□□□ -0.34
CIRBP-237ENST00000592234 DEFB130BP0DP73 79 aa12.95□□□□□ -0.34
CIRBP-237ENST00000592234 DEFB130AP0DP74 79 aa12.95□□□□□ -0.34
CIRBP-237ENST00000592234 TSPOP30536 169 aa12.95□□□□□ -0.34
CIRBP-237ENST00000592234 RPL29P47914 159 aaKnown RBP12.95□□□□□ -0.34
CIRBP-237ENST00000592234 LCN15Q6UWW0 184 aa12.95□□□□□ -0.34
CIRBP-237ENST00000592234 PPP1R1CQ8WVI7 109 aa12.95□□□□□ -0.34
CIRBP-237ENST00000592234 LINC01587Q99440 93 aa12.95□□□□□ -0.34
CIRBP-237ENST00000592234 SLC25A31Q9H0C2 315 aa12.95□□□□□ -0.34
CIRBP-237ENST00000592234 AZU1P20160 251 aa12.94□□□□□ -0.34
CIRBP-237ENST00000592234 CYCSP99999 105 aaKnown RBP12.94□□□□□ -0.34
CIRBP-237ENST00000592234 GCSAMLQ5JQS6 135 aa12.94□□□□□ -0.34
CIRBP-237ENST00000592234 SOHLH1Q5JUK2 328 aa12.94□□□□□ -0.34
CIRBP-237ENST00000592234 TMEM256Q8N2U0 113 aa12.94□□□□□ -0.34
CIRBP-237ENST00000592234 RPUSD4Q96CM3 377 aaKnown RBP12.94□□□□□ -0.34
CIRBP-237ENST00000592234 NPCDR1Q9BY65 106 aa12.94□□□□□ -0.34
CIRBP-237ENST00000592234 ZNF331Q9NQX6 463 aaPredicted RBP12.94□□□□□ -0.34
CIRBP-237ENST00000592234 DNAH11Q96DT5 4516 aa12.93□□□□□ -0.34
CIRBP-237ENST00000592234 H3BQ15 152 aa12.93□□□□□ -0.34
CIRBP-237ENST00000592234 MED14OSP0DP75 135 aa12.93□□□□□ -0.34
CIRBP-237ENST00000592234 PFDN5Q99471 154 aa12.93□□□□□ -0.34
CIRBP-237ENST00000592234 SLC50A1Q9BRV3 221 aa12.93□□□□□ -0.34
CIRBP-237ENST00000592234 ATG101Q9BSB4 218 aa12.93□□□□□ -0.34
CIRBP-237ENST00000592234 MUC4Q99102 2169 aa12.93□□□□□ -0.34
CIRBP-237ENST00000592234 PLAC8L1A1L4L8 177 aa12.92□□□□□ -0.34
CIRBP-237ENST00000592234 PRAC2D3DTV9 90 aa12.92□□□□□ -0.34
CIRBP-237ENST00000592234 F5H768 121 aa12.92□□□□□ -0.34
CIRBP-237ENST00000592234 IGLC2P0DOY2 106 aa12.92□□□□□ -0.34
CIRBP-237ENST00000592234 HTN1P15515 57 aa12.92□□□□□ -0.34
CIRBP-237ENST00000592234 CXCL2P19875 107 aa12.92□□□□□ -0.34
CIRBP-237ENST00000592234 TAS2R60P59551 318 aa12.92□□□□□ -0.34
CIRBP-237ENST00000592234 FCN2Q15485 313 aa12.92□□□□□ -0.34
CIRBP-237ENST00000592234 PCLOQ9Y6V0 5065 aa12.92□□□□□ -0.34
CIRBP-237ENST00000592234 ATP5G1P05496 136 aa12.91□□□□□ -0.34
CIRBP-237ENST00000592234 CDKN1BP46527 198 aa12.91□□□□□ -0.34
CIRBP-237ENST00000592234 ATP5G3P48201 142 aa12.91□□□□□ -0.34
CIRBP-237ENST00000592234 FAM3BP58499 235 aaPredicted RBP12.91□□□□□ -0.34
CIRBP-237ENST00000592234 C1orf134Q5TEV5 83 aa12.91□□□□□ -0.34
CIRBP-237ENST00000592234 C16orf74Q96GX8 76 aa12.91□□□□□ -0.34
CIRBP-237ENST00000592234 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
CIRBP-237ENST00000592234 ALG5Q9Y673 324 aa12.91□□□□□ -0.34
CIRBP-237ENST00000592234 MPDU1O75352 247 aa12.9□□□□□ -0.34
CIRBP-237ENST00000592234 MPC2O95563 127 aa12.9□□□□□ -0.34
CIRBP-237ENST00000592234 NUDT3O95989 172 aa12.9□□□□□ -0.34
CIRBP-237ENST00000592234 PYYP10082 97 aa12.9□□□□□ -0.34
CIRBP-237ENST00000592234 SAT2Q96F10 170 aaPredicted RBP12.9□□□□□ -0.34
CIRBP-237ENST00000592234 SMIM3Q9BZL3 60 aa12.9□□□□□ -0.34
CIRBP-237ENST00000592234 ZNF586Q9NXT0 402 aa12.9□□□□□ -0.34
CIRBP-237ENST00000592234 CBY3A6NI87 242 aa12.89□□□□□ -0.35
CIRBP-237ENST00000592234 CHAC2Q8WUX2 184 aa12.89□□□□□ -0.35
CIRBP-237ENST00000592234 WDR61Q9GZS3 305 aaKnown RBP12.89□□□□□ -0.35
CIRBP-237ENST00000592234 MBD2Q9UBB5 411 aa12.89□□□□□ -0.35
CIRBP-237ENST00000592234 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
CIRBP-237ENST00000592234 MIR17HGQ75NE6 70 aa12.88□□□□□ -0.35
CIRBP-237ENST00000592234 BLNKQ8WV28 456 aa12.88□□□□□ -0.35
CIRBP-237ENST00000592234 HSPB11Q9Y547 144 aa12.88□□□□□ -0.35
CIRBP-237ENST00000592234 H7BYZ3 331 aa12.87□□□□□ -0.35
CIRBP-237ENST00000592234 J3KRW8 73 aa12.87□□□□□ -0.35
CIRBP-237ENST00000592234 PET100P0DJ07 73 aa12.87□□□□□ -0.35
CIRBP-237ENST00000592234 KIR3DS1Q14943 382 aa12.87□□□□□ -0.35
CIRBP-237ENST00000592234 ZNF493Q6ZR52 646 aa12.87□□□□□ -0.35
CIRBP-237ENST00000592234 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
CIRBP-237ENST00000592234 TMEM263Q8WUH6 116 aaKnown RBP12.87□□□□□ -0.35
CIRBP-237ENST00000592234 ATP5SQ99766 215 aa12.87□□□□□ -0.35
CIRBP-237ENST00000592234 SLC25A2Q9BXI2 301 aa12.87□□□□□ -0.35
CIRBP-237ENST00000592234 NOP10Q9NPE3 64 aaKnown RBP12.87□□□□□ -0.35
CIRBP-237ENST00000592234 RPL12P30050 165 aaKnown RBP12.86□□□□□ -0.35
CIRBP-237ENST00000592234 GUK1Q16774 197 aa12.86□□□□□ -0.35
CIRBP-237ENST00000592234 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
CIRBP-237ENST00000592234 C20orf144Q9BQM9 153 aa12.86□□□□□ -0.35
CIRBP-237ENST00000592234 TIMM9Q9Y5J7 89 aa12.86□□□□□ -0.35
CIRBP-237ENST00000592234 TRBV19A0A075B6N1 114 aa12.85□□□□□ -0.35
CIRBP-237ENST00000592234 C17orf112F2Z3M2 114 aa12.85□□□□□ -0.35
CIRBP-237ENST00000592234 M0R3E3 92 aa12.85□□□□□ -0.35
CIRBP-237ENST00000592234 PTTG1O95997 202 aa12.85□□□□□ -0.35
CIRBP-237ENST00000592234 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
CIRBP-237ENST00000592234 CCL18P55774 89 aa12.85□□□□□ -0.35
CIRBP-237ENST00000592234 TMEM14CQ9P0S9 112 aa12.85□□□□□ -0.35
CIRBP-237ENST00000592234 NBDYA0A0U1RRE5 68 aa12.84□□□□□ -0.35
CIRBP-237ENST00000592234 NDUFB4O95168 129 aa12.84□□□□□ -0.35
CIRBP-237ENST00000592234 CCDC28AQ8IWP9 274 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms