RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 LINC00310P59036 64 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 B2MP61769 119 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 VWC2Q2TAL6 325 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 FAM78BQ5VT40 261 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 EBLN2Q6P2I7 272 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 Q6ZRG5 221 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 LINC00305Q7Z4B0 112 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 OR4B1Q8NGF8 309 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 C17orf77Q96MU5 243 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 NIPSNAP3BQ9BS92 247 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 SHANK2-AS3Q9BTD1 123 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 KRTAP9-3Q9BYQ3 159 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 SLC39A9Q9NUM3 307 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 HSPB11Q9Y547 144 aa7.4□□□□□ -1.22
VPS4B-207ENST00000591519 TRAV5A0A0B4J249 113 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 H3BTX0 84 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 RTL8CO15255 209 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 EMP1P54849 157 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 FXYD7P58549 80 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 PLP1P60201 277 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 OPCMLQ14982 345 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 RNF212Q495C1 297 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 Q5BKY6 102 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 FAM222AQ5U5X8 452 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 MORN5Q5VZ52 161 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 C10orf113Q5VZT2 155 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 RNF182Q8N6D2 247 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 C20orf173Q96LM9 149 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 NPCDR1Q9BY65 106 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 SLC35B3Q9H1N7 401 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 RPRMQ9NS64 109 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 GOLT1BQ9Y3E0 138 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 PXMP4Q9Y6I8 212 aa7.39□□□□□ -1.23
VPS4B-207ENST00000591519 IGHV3OR16-12A0A075B7B8 117 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 F6UB75 175 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 GCSAMLQ5JQS6 135 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 PXDC1Q5TGL8 231 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 AMTNQ6UX39 209 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 Q6ZR54 194 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 LRRC20Q8TCA0 184 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 TMEM37Q8WXS4 190 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 GPR82Q96P67 336 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 ATP5SQ99766 215 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 WFDC1Q9HC57 220 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 DNAJC4Q9NNZ3 241 aa7.38□□□□□ -1.23
VPS4B-207ENST00000591519 FXYD6-FXYD2A0A087WZ82 144 aa7.37□□□□□ -1.23
VPS4B-207ENST00000591519 PRSS29PA6NIE9 313 aa7.37□□□□□ -1.23
VPS4B-207ENST00000591519 IFNA5P01569 189 aa7.37□□□□□ -1.23
VPS4B-207ENST00000591519 HBE1P02100 147 aa7.37□□□□□ -1.23
VPS4B-207ENST00000591519 GIPP09681 153 aaPredicted RBP7.37□□□□□ -1.23
VPS4B-207ENST00000591519 RPL7P18124 248 aaKnown RBP7.37□□□□□ -1.23
VPS4B-207ENST00000591519 RPL29P47914 159 aaKnown RBP7.37□□□□□ -1.23
VPS4B-207ENST00000591519 RRN3P1Q2M238 152 aa7.37□□□□□ -1.23
VPS4B-207ENST00000591519 S100A7AQ86SG5 101 aa7.37□□□□□ -1.23
VPS4B-207ENST00000591519 OR1L4Q8NGR5 311 aa7.37□□□□□ -1.23
VPS4B-207ENST00000591519 SCGB1C1Q8TD33 95 aa7.37□□□□□ -1.23
VPS4B-207ENST00000591519 IGF2BP2-AS1Q96M15 143 aa7.37□□□□□ -1.23
VPS4B-207ENST00000591519 WDR61Q9GZS3 305 aaKnown RBP7.37□□□□□ -1.23
VPS4B-207ENST00000591519 YTHDF2Q9Y5A9 579 aaKnown RBP7.37□□□□□ -1.23
VPS4B-207ENST00000591519 LOC102723971A0A1B0GUV8 181 aa7.36□□□□□ -1.23
VPS4B-207ENST00000591519 SMLR1H3BR10 107 aa7.36□□□□□ -1.23
VPS4B-207ENST00000591519 M0R2N4 97 aa7.36□□□□□ -1.23
VPS4B-207ENST00000591519 CRXO43186 299 aaPredicted RBP7.36□□□□□ -1.23
VPS4B-207ENST00000591519 MPDU1O75352 247 aa7.36□□□□□ -1.23
VPS4B-207ENST00000591519 DUSP14O95147 198 aaKnown RBP7.36□□□□□ -1.23
VPS4B-207ENST00000591519 ZNF738Q8NE65 137 aa7.36□□□□□ -1.23
VPS4B-207ENST00000591519 OR2T35Q8NGX2 323 aa7.36□□□□□ -1.23
VPS4B-207ENST00000591519 PFDN5Q99471 154 aa7.36□□□□□ -1.23
VPS4B-207ENST00000591519 DNAH17Q9UFH2 4485 aa7.36□□□□□ -1.23
VPS4B-207ENST00000591519 FAT2Q9NYQ8 4349 aa7.36□□□□□ -1.23
VPS4B-207ENST00000591519 DNAH2Q9P225 4427 aa7.35□□□□□ -1.23
VPS4B-207ENST00000591519 TRAV8-2A0A0B4J237 113 aa7.35□□□□□ -1.23
VPS4B-207ENST00000591519 C17orf112F2Z3M2 114 aa7.35□□□□□ -1.23
VPS4B-207ENST00000591519 EIF3GO75821 320 aaKnown RBP eCLIP7.35□□□□□ -1.23
VPS4B-207ENST00000591519 HOXA5P20719 270 aa7.35□□□□□ -1.23
VPS4B-207ENST00000591519 TSPOP30536 169 aa7.35□□□□□ -1.23
VPS4B-207ENST00000591519 FAM3BP58499 235 aaPredicted RBP7.35□□□□□ -1.23
VPS4B-207ENST00000591519 FFAR4Q5NUL3 377 aa7.35□□□□□ -1.23
VPS4B-207ENST00000591519 BPIFA4PQ86YQ2 179 aa7.35□□□□□ -1.23
VPS4B-207ENST00000591519 CHAC2Q8WUX2 184 aa7.35□□□□□ -1.23
VPS4B-207ENST00000591519 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 A0A087X0K7 114 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 LYRM9A8MSI8 78 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 H3BQ15 152 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 SLC17A3O00476 420 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 MRPS12O15235 138 aaKnown RBP7.34□□□□□ -1.23
VPS4B-207ENST00000591519 PYYP10082 97 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 CNN1P51911 297 aaKnown RBP7.34□□□□□ -1.23
VPS4B-207ENST00000591519 DAD1P61803 113 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 MIR17HGQ75NE6 70 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 BLNKQ8WV28 456 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 KCNIP2Q9NS61 270 aa7.34□□□□□ -1.23
VPS4B-207ENST00000591519 MUC4Q99102 2169 aa7.33□□□□□ -1.24
VPS4B-207ENST00000591519 NACAE9PAV3 2078 aa7.33□□□□□ -1.24
VPS4B-207ENST00000591519 PLAC8L1A1L4L8 177 aa7.33□□□□□ -1.24
VPS4B-207ENST00000591519 HIST1H1AQ02539 215 aaPredicted RBP7.33□□□□□ -1.24
VPS4B-207ENST00000591519 TMEM88Q6PEY1 159 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms