RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 Q6ZRG5 221 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 OR1L4Q8NGR5 311 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 THAP6Q8TBB0 222 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 PHLDA1Q8WV24 401 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-211ENST00000590499 NEU1Q99519 415 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 MFFQ9GZY8 342 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 ZNF331Q9NQX6 463 aaPredicted RBP8.07□□□□□ -1.12
SMAD4-211ENST00000590499 TMA7Q9Y2S6 64 aaKnown RBP8.07□□□□□ -1.12
SMAD4-211ENST00000590499 ALG5Q9Y673 324 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 PXMP4Q9Y6I8 212 aa8.07□□□□□ -1.12
SMAD4-211ENST00000590499 TRAV5A0A0B4J249 113 aa8.06□□□□□ -1.12
SMAD4-211ENST00000590499 SLC17A3O00476 420 aa8.06□□□□□ -1.12
SMAD4-211ENST00000590499 CLINT1Q14677 625 aa8.06□□□□□ -1.12
SMAD4-211ENST00000590499 PSG3Q16557 428 aa8.06□□□□□ -1.12
SMAD4-211ENST00000590499 LCN15Q6UWW0 184 aa8.06□□□□□ -1.12
SMAD4-211ENST00000590499 BPIFA4PQ86YQ2 179 aa8.06□□□□□ -1.12
SMAD4-211ENST00000590499 ZNF738Q8NE65 137 aa8.06□□□□□ -1.12
SMAD4-211ENST00000590499 OR11H7Q8NGC8 314 aa8.06□□□□□ -1.12
SMAD4-211ENST00000590499 SAT2Q96F10 170 aaPredicted RBP8.06□□□□□ -1.12
SMAD4-211ENST00000590499 PFDN5Q99471 154 aa8.06□□□□□ -1.12
SMAD4-211ENST00000590499 H3BQ15 152 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 CRXO43186 299 aaPredicted RBP8.05□□□□□ -1.12
SMAD4-211ENST00000590499 JTBO76095 146 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 DUSP14O95147 198 aaKnown RBP8.05□□□□□ -1.12
SMAD4-211ENST00000590499 SNRPCP09234 159 aaKnown RBP8.05□□□□□ -1.12
SMAD4-211ENST00000590499 PET100P0DJ07 73 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 GCSAMLQ5JQS6 135 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 C1orf158Q8N1D5 194 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 OR8A1Q8NGG7 326 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 SLC50A1Q9BRV3 221 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 WDR61Q9GZS3 305 aaKnown RBP8.05□□□□□ -1.12
SMAD4-211ENST00000590499 MBD2Q9UBB5 411 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 CELA1Q9UNI1 258 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 HSPB11Q9Y547 144 aa8.05□□□□□ -1.12
SMAD4-211ENST00000590499 SMIM9A6NGZ8 99 aa8.04□□□□□ -1.12
SMAD4-211ENST00000590499 H3BTX0 84 aa8.04□□□□□ -1.12
SMAD4-211ENST00000590499 LINC00476Q8WZB0 136 aa8.04□□□□□ -1.12
SMAD4-211ENST00000590499 IGF2BP2-AS1Q96M15 143 aa8.04□□□□□ -1.12
SMAD4-211ENST00000590499 ATP5SQ99766 215 aa8.04□□□□□ -1.12
SMAD4-211ENST00000590499 ZNF586Q9NXT0 402 aa8.04□□□□□ -1.12
SMAD4-211ENST00000590499 TMEM14CQ9P0S9 112 aa8.04□□□□□ -1.12
SMAD4-211ENST00000590499 KLK5Q9Y337 293 aaPredicted RBP8.04□□□□□ -1.12
SMAD4-211ENST00000590499 BIRC6Q9NR09 4857 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 DNAH10Q8IVF4 4471 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 M0R2Z0 102 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 ZNF253O75346 499 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 AMBPP02760 352 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 RPL12P30050 165 aaKnown RBP8.03□□□□□ -1.12
SMAD4-211ENST00000590499 FCN2Q15485 313 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 GUK1Q16774 197 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 SPINK13Q1W4C9 94 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 LRRC20Q8TCA0 184 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 RPUSD4Q96CM3 377 aaKnown RBP8.03□□□□□ -1.12
SMAD4-211ENST00000590499 FAM167A-AS1Q96KT0 104 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 KCNIP2Q9NS61 270 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 GOLT1BQ9Y3E0 138 aa8.03□□□□□ -1.12
SMAD4-211ENST00000590499 PRAC2D3DTV9 90 aa8.02□□□□□ -1.13
SMAD4-211ENST00000590499 BOLA2-SMG1P6H3BVE0 249 aa8.02□□□□□ -1.13
SMAD4-211ENST00000590499 PRB4P10163 310 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-211ENST00000590499 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-211ENST00000590499 C12orf74Q32Q52 190 aa8.02□□□□□ -1.13
SMAD4-211ENST00000590499 Q6ZTC4 211 aa8.02□□□□□ -1.13
SMAD4-211ENST00000590499 SLC25A2Q9BXI2 301 aa8.02□□□□□ -1.13
SMAD4-211ENST00000590499 RFNGQ9Y644 331 aa8.02□□□□□ -1.13
SMAD4-211ENST00000590499 TRBV19A0A075B6N1 114 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 IGHV3OR16-12A0A075B7B8 117 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 TMEM189A5PLL7 270 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 C11orf94C9JXX5 98 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 NDUFB4O95168 129 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 INSP01308 110 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 PYYP10082 97 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 HIST1H1EP10412 219 aaKnown RBP8.01□□□□□ -1.13
SMAD4-211ENST00000590499 MIR17HGQ75NE6 70 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 BAP18Q8IXM2 172 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 PARD6GQ9BYG4 376 aaPredicted RBP8.01□□□□□ -1.13
SMAD4-211ENST00000590499 MED28Q9H204 178 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 WFDC1Q9HC57 220 aa8.01□□□□□ -1.13
SMAD4-211ENST00000590499 FRAS1Q86XX4 4008 aa8□□□□□ -1.13
SMAD4-211ENST00000590499 TRAV12-2A0A075B6T6 113 aa8□□□□□ -1.13
SMAD4-211ENST00000590499 C17orf112F2Z3M2 114 aa8□□□□□ -1.13
SMAD4-211ENST00000590499 HBE1P02100 147 aa8□□□□□ -1.13
SMAD4-211ENST00000590499 PDE6HQ13956 83 aa8□□□□□ -1.13
SMAD4-211ENST00000590499 C2CD4CQ8TF44 421 aa8□□□□□ -1.13
SMAD4-211ENST00000590499 MRPL53Q96EL3 112 aaKnown RBP8□□□□□ -1.13
SMAD4-211ENST00000590499 MRPL32Q9BYC8 188 aaKnown RBP8□□□□□ -1.13
SMAD4-211ENST00000590499 SMIM3Q9BZL3 60 aa8□□□□□ -1.13
SMAD4-211ENST00000590499 DKK2Q9UBU2 259 aa8□□□□□ -1.13
SMAD4-211ENST00000590499 TRAV10A0A0B4J240 114 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 LOC102723971A0A1B0GUV8 181 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 M0R3E3 92 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 TCTAP57738 103 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 RHOBP62745 196 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 OXA1LQ15070 435 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 RRN3P1Q2M238 152 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 Q5BKY6 102 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 ZNF767PQ75MW2 155 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 ASB13Q8WXK3 278 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 FXYD5Q96DB9 178 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 CDIP1Q9H305 208 aa7.99□□□□□ -1.13
SMAD4-211ENST00000590499 FUT9Q9Y231 359 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms