RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 H3BTX0 84 aa10.24□□□□□ -0.77
MBD1-220ENST00000589758 CNN1P51911 297 aaKnown RBP10.24□□□□□ -0.77
MBD1-220ENST00000589758 AMTNQ6UX39 209 aa10.24□□□□□ -0.77
MBD1-220ENST00000589758 LINC00336Q6ZUF6 198 aa10.24□□□□□ -0.77
MBD1-220ENST00000589758 LRRC20Q8TCA0 184 aa10.24□□□□□ -0.77
MBD1-220ENST00000589758 TRAV8-2A0A0B4J237 113 aa10.23□□□□□ -0.77
MBD1-220ENST00000589758 BPIFA4PQ86YQ2 179 aa10.23□□□□□ -0.77
MBD1-220ENST00000589758 RNF182Q8N6D2 247 aa10.23□□□□□ -0.77
MBD1-220ENST00000589758 INO80EQ8NBZ0 244 aaPredicted RBP10.23□□□□□ -0.77
MBD1-220ENST00000589758 AQP10Q96PS8 301 aa10.23□□□□□ -0.77
MBD1-220ENST00000589758 KCNIP2Q9NS61 270 aa10.23□□□□□ -0.77
MBD1-220ENST00000589758 YTHDF2Q9Y5A9 579 aaKnown RBP10.23□□□□□ -0.77
MBD1-220ENST00000589758 A0A087X0K7 114 aa10.22□□□□□ -0.77
MBD1-220ENST00000589758 MRPS12O15235 138 aaKnown RBP10.22□□□□□ -0.77
MBD1-220ENST00000589758 PRB4P10163 310 aaPredicted RBP10.22□□□□□ -0.77
MBD1-220ENST00000589758 FFAR4Q5NUL3 377 aa10.22□□□□□ -0.77
MBD1-220ENST00000589758 ZNF738Q8NE65 137 aa10.22□□□□□ -0.77
MBD1-220ENST00000589758 G3V3Q6 166 aa10.21□□□□□ -0.77
MBD1-220ENST00000589758 INSP01308 110 aa10.21□□□□□ -0.77
MBD1-220ENST00000589758 DAD1P61803 113 aa10.21□□□□□ -0.77
MBD1-220ENST00000589758 SPINK13Q1W4C9 94 aa10.21□□□□□ -0.77
MBD1-220ENST00000589758 UBE2DNLQ8IWF7 75 aa10.21□□□□□ -0.77
MBD1-220ENST00000589758 TNFSF18Q9UNG2 199 aa10.21□□□□□ -0.77
MBD1-220ENST00000589758 RNF222A6NCQ9 220 aa10.2□□□□□ -0.78
MBD1-220ENST00000589758 H3BQ15 152 aa10.2□□□□□ -0.78
MBD1-220ENST00000589758 M0R2Z0 102 aa10.2□□□□□ -0.78
MBD1-220ENST00000589758 ARPC5O15511 151 aa10.2□□□□□ -0.78
MBD1-220ENST00000589758 CRXO43186 299 aaPredicted RBP10.2□□□□□ -0.78
MBD1-220ENST00000589758 HTN3P15516 51 aa10.2□□□□□ -0.78
MBD1-220ENST00000589758 MIR17HGQ75NE6 70 aa10.2□□□□□ -0.78
MBD1-220ENST00000589758 HSD17B11Q8NBQ5 300 aa10.2□□□□□ -0.78
MBD1-220ENST00000589758 PARD6GQ9BYG4 376 aaPredicted RBP10.2□□□□□ -0.78
MBD1-220ENST00000589758 PPP1R14DQ9NXH3 145 aa10.2□□□□□ -0.78
MBD1-220ENST00000589758 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
MBD1-220ENST00000589758 LYRM9A8MSI8 78 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 BOLA2-SMG1P6H3BVE0 249 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 SLC17A3O00476 420 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 IGLC2P0DOY2 106 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 PYYP10082 97 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 CXCL2P19875 107 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 TSPOP30536 169 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 RHOBP62745 196 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 ZNF266Q14584 549 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 PSG3Q16557 428 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 LGALS9BQ3B8N2 356 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 RNF212Q495C1 297 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 LCN15Q6UWW0 184 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 OR8A1Q8NGG7 326 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 SLC25A2Q9BXI2 301 aa10.19□□□□□ -0.78
MBD1-220ENST00000589758 ZNF705GA8MUZ8 300 aaPredicted RBP10.18□□□□□ -0.78
MBD1-220ENST00000589758 EIF3GO75821 320 aaKnown RBP eCLIP10.18□□□□□ -0.78
MBD1-220ENST00000589758 HIST1H1AQ02539 215 aaPredicted RBP10.18□□□□□ -0.78
MBD1-220ENST00000589758 TMEM256Q8N2U0 113 aa10.18□□□□□ -0.78
MBD1-220ENST00000589758 BLNKQ8WV28 456 aa10.18□□□□□ -0.78
MBD1-220ENST00000589758 SLC50A1Q9BRV3 221 aa10.18□□□□□ -0.78
MBD1-220ENST00000589758 ZNF586Q9NXT0 402 aa10.18□□□□□ -0.78
MBD1-220ENST00000589758 FUT9Q9Y231 359 aa10.18□□□□□ -0.78
MBD1-220ENST00000589758 hCG_2014768A0A024R1R8 64 aa10.17□□□□□ -0.78
MBD1-220ENST00000589758 RPL7L1Q6DKI1 246 aaKnown RBP10.17□□□□□ -0.78
MBD1-220ENST00000589758 Q6ZNX1 250 aa10.17□□□□□ -0.78
MBD1-220ENST00000589758 BAP18Q8IXM2 172 aa10.17□□□□□ -0.78
MBD1-220ENST00000589758 C15orf53Q8NAA6 179 aa10.17□□□□□ -0.78
MBD1-220ENST00000589758 LINC01587Q99440 93 aa10.17□□□□□ -0.78
MBD1-220ENST00000589758 MRPL32Q9BYC8 188 aaKnown RBP10.17□□□□□ -0.78
MBD1-220ENST00000589758 ZNF331Q9NQX6 463 aaPredicted RBP10.17□□□□□ -0.78
MBD1-220ENST00000589758 TIMM9Q9Y5J7 89 aa10.17□□□□□ -0.78
MBD1-220ENST00000589758 TRAV12-2A0A075B6T6 113 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 BORCS7-ASMTA0A0B4J1R7 106 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 M0R2N4 97 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 OR7C2O60412 319 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 OR10J4P0C629 311 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 HIST1H1EP10412 219 aaKnown RBP10.16□□□□□ -0.78
MBD1-220ENST00000589758 ATP6V0CP27449 155 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 TAS2R60P59551 318 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 RAB2AP61019 212 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 GUK1Q16774 197 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 ACOT6Q3I5F7 207 aaPredicted RBP10.16□□□□□ -0.78
MBD1-220ENST00000589758 FAM122CQ6P4D5 195 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 TMEM88Q6PEY1 159 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 RPUSD4Q96CM3 377 aaKnown RBP10.16□□□□□ -0.78
MBD1-220ENST00000589758 SAT2Q96F10 170 aaPredicted RBP10.16□□□□□ -0.78
MBD1-220ENST00000589758 FAM167A-AS1Q96KT0 104 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 OR51M1Q9H341 326 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 TMEM14CQ9P0S9 112 aa10.16□□□□□ -0.78
MBD1-220ENST00000589758 CDKN1BP46527 198 aa10.15□□□□□ -0.78
MBD1-220ENST00000589758 OR11H4Q8NGC9 324 aa10.15□□□□□ -0.78
MBD1-220ENST00000589758 C16orf74Q96GX8 76 aa10.15□□□□□ -0.78
MBD1-220ENST00000589758 C20orf144Q9BQM9 153 aa10.15□□□□□ -0.78
MBD1-220ENST00000589758 PAXXQ9BUH6 204 aa10.15□□□□□ -0.78
MBD1-220ENST00000589758 SH3BGRL3Q9H299 93 aa10.15□□□□□ -0.78
MBD1-220ENST00000589758 TRBV19A0A075B6N1 114 aa10.14□□□□□ -0.79
MBD1-220ENST00000589758 A0A1W2PPV4 95 aa10.14□□□□□ -0.79
MBD1-220ENST00000589758 PRSS29PA6NIE9 313 aa10.14□□□□□ -0.79
MBD1-220ENST00000589758 PRM2P04554 102 aa10.14□□□□□ -0.79
MBD1-220ENST00000589758 DEFB130BP0DP73 79 aa10.14□□□□□ -0.79
MBD1-220ENST00000589758 DEFB130AP0DP74 79 aa10.14□□□□□ -0.79
MBD1-220ENST00000589758 AZU1P20160 251 aa10.14□□□□□ -0.79
MBD1-220ENST00000589758 M6PRP20645 277 aa10.14□□□□□ -0.79
MBD1-220ENST00000589758 FAM3BP58499 235 aaPredicted RBP10.14□□□□□ -0.79
MBD1-220ENST00000589758 OR10G4Q8NGN3 311 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms