RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 RABL2BQ9UNT1 228 aa10.34□□□□□ -0.75
IFT20-216ENST00000588477 RNF24Q9Y225 148 aa10.34□□□□□ -0.75
IFT20-216ENST00000588477 IGHV3-53P01767 116 aa10.33□□□□□ -0.76
IFT20-216ENST00000588477 HOXB5P09067 269 aa10.33□□□□□ -0.76
IFT20-216ENST00000588477 VAMP1P23763 118 aa10.33□□□□□ -0.76
IFT20-216ENST00000588477 RRAS2P62070 204 aaPredicted RBP10.33□□□□□ -0.76
IFT20-216ENST00000588477 LINC00305Q7Z4B0 112 aa10.33□□□□□ -0.76
IFT20-216ENST00000588477 BPIFA4PQ86YQ2 179 aa10.33□□□□□ -0.76
IFT20-216ENST00000588477 TMEM70Q9BUB7 260 aa10.33□□□□□ -0.76
IFT20-216ENST00000588477 IGLV5-52A0A0A0MRZ9 124 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 NPIPB6E9PJ23 425 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 CCNKO75909 580 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 TEPPQ6URK8 271 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 ZNF680Q8NEM1 530 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 ODF3Q96PU9 254 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 LINC00467Q9BRT7 94 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 NPVFQ9HCQ7 196 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 PSENENQ9NZ42 101 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 PRO0255Q9UI72 69 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 KLF12Q9Y4X4 402 aa10.32□□□□□ -0.76
IFT20-216ENST00000588477 SPINK4O60575 86 aa10.31□□□□□ -0.76
IFT20-216ENST00000588477 PRAF2O60831 178 aa10.31□□□□□ -0.76
IFT20-216ENST00000588477 CRYBA4P53673 196 aa10.31□□□□□ -0.76
IFT20-216ENST00000588477 POLR2GP62487 172 aaKnown RBP eCLIP10.31□□□□□ -0.76
IFT20-216ENST00000588477 SLC38A11Q08AI6 406 aa10.31□□□□□ -0.76
IFT20-216ENST00000588477 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
IFT20-216ENST00000588477 NEGR1Q7Z3B1 354 aa10.31□□□□□ -0.76
IFT20-216ENST00000588477 WFDC10BQ8IUB3 73 aa10.31□□□□□ -0.76
IFT20-216ENST00000588477 ST6GAL2Q96JF0 529 aa10.31□□□□□ -0.76
IFT20-216ENST00000588477 RABL2AQ9UBK7 228 aaPredicted RBP10.31□□□□□ -0.76
IFT20-216ENST00000588477 PXMP4Q9Y6I8 212 aa10.31□□□□□ -0.76
IFT20-216ENST00000588477 C7orf71A4D174 169 aa10.3□□□□□ -0.76
IFT20-216ENST00000588477 KRTAP29-1A8MX34 341 aaPredicted RBP10.3□□□□□ -0.76
IFT20-216ENST00000588477 SLC25A5P05141 298 aaKnown RBP10.3□□□□□ -0.76
IFT20-216ENST00000588477 EVI2AP22794 236 aa10.3□□□□□ -0.76
IFT20-216ENST00000588477 EIF4E3Q8N5X7 224 aaKnown RBP10.3□□□□□ -0.76
IFT20-216ENST00000588477 SAT2Q96F10 170 aaPredicted RBP10.3□□□□□ -0.76
IFT20-216ENST00000588477 C8orf49Q96NF6 230 aa10.3□□□□□ -0.76
IFT20-216ENST00000588477 HHLA3Q9XRX5 114 aa10.3□□□□□ -0.76
IFT20-216ENST00000588477 H3BQ15 152 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 K7EP13 123 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 K7EPK0 472 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 GOSR2O14653 212 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 SFT2D2O95562 160 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 TCL1AP56279 114 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 ID3Q02535 119 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 SLAQ13239 276 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 ANXA2RQ3ZCQ2 193 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 PXDC1Q5TGL8 231 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 MORN5Q5VZ52 161 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 MRPL16Q9NX20 251 aaKnown RBP10.29□□□□□ -0.76
IFT20-216ENST00000588477 FAM30AQ9NZY2 134 aa10.29□□□□□ -0.76
IFT20-216ENST00000588477 CCDC59Q9P031 241 aaKnown RBP10.29□□□□□ -0.76
IFT20-216ENST00000588477 METTL15P1P0C7V9 234 aa10.28□□□□□ -0.76
IFT20-216ENST00000588477 IGLC2P0DOY2 106 aa10.28□□□□□ -0.76
IFT20-216ENST00000588477 CD300CQ08708 224 aa10.28□□□□□ -0.76
IFT20-216ENST00000588477 BTN1A1Q13410 526 aa10.28□□□□□ -0.76
IFT20-216ENST00000588477 PPP1R1AQ13522 171 aa10.28□□□□□ -0.76
IFT20-216ENST00000588477 FHL2Q14192 279 aa10.28□□□□□ -0.76
IFT20-216ENST00000588477 TMEM37Q8WXS4 190 aa10.28□□□□□ -0.76
IFT20-216ENST00000588477 MGAT4CQ9UBM8 478 aa10.28□□□□□ -0.76
IFT20-216ENST00000588477 RSL24D1Q9UHA3 163 aaKnown RBP10.28□□□□□ -0.76
IFT20-216ENST00000588477 E5RGE8 158 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 AGPAT2O15120 278 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 PSCAO43653 123 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 SSSCA1O60232 199 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 COX7A2P2O60397 106 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 PLA2G1BP04054 148 aaKnown RBP10.27□□□□□ -0.77
IFT20-216ENST00000588477 FAUP35544 74 aaKnown RBP10.27□□□□□ -0.77
IFT20-216ENST00000588477 ERCC8Q13216 396 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 OPCMLQ14982 345 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 SPCS2Q15005 226 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 C4orf46Q504U0 113 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 SERTAD4-AS1Q5TG53 156 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 ZNF546Q86UE3 836 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 OR10P1Q8NGE3 313 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 NTN5Q8WTR8 489 aaPredicted RBP10.27□□□□□ -0.77
IFT20-216ENST00000588477 SMIM8Q96KF7 97 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 TP53TG3Q9ULZ0 132 aa10.27□□□□□ -0.77
IFT20-216ENST00000588477 LRCOL1A6NCL2 159 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 KLLNB2CW77 178 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 FNDC10F2Z333 226 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 K7EQD1 137 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 MPDU1O75352 247 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 CRYGDP07320 174 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 SRIP30626 198 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 RNASE4P34096 147 aaKnown RBP10.26□□□□□ -0.77
IFT20-216ENST00000588477 IBA57Q5T440 356 aaKnown RBP10.26□□□□□ -0.77
IFT20-216ENST00000588477 C10orf113Q5VZT2 155 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 TMEM14EPQ6UXP3 125 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 SYT8Q8NBV8 401 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 VGLL1Q99990 258 aa10.26□□□□□ -0.77
IFT20-216ENST00000588477 MRPL32Q9BYC8 188 aaKnown RBP10.26□□□□□ -0.77
IFT20-216ENST00000588477 UBR4Q5T4S7 5183 aa10.25□□□□□ -0.77
IFT20-216ENST00000588477 TRAV5A0A0B4J249 113 aa10.25□□□□□ -0.77
IFT20-216ENST00000588477 TRGV4A0A0C4DH28 118 aa10.25□□□□□ -0.77
IFT20-216ENST00000588477 FABP12A6NFH5 140 aa10.24□□□□□ -0.77
IFT20-216ENST00000588477 M0R3E3 92 aa10.24□□□□□ -0.77
IFT20-216ENST00000588477 RGS13O14921 159 aa10.24□□□□□ -0.77
IFT20-216ENST00000588477 GPX1P07203 203 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms