RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
RANBP3-208ENST00000587263 NIPSNAP3BQ9BS92 247 aa10.59□□□□□ -0.71
RANBP3-208ENST00000587263 CELA1Q9UNI1 258 aa10.59□□□□□ -0.71
RANBP3-208ENST00000587263 RFNGQ9Y644 331 aa10.59□□□□□ -0.71
RANBP3-208ENST00000587263 X6R8D5 127 aa10.59□□□□□ -0.71
RANBP3-208ENST00000587263 DMBT1Q9UGM3 2413 aaPredicted RBP10.58□□□□□ -0.72
RANBP3-208ENST00000587263 IGHV3-49A0A0A0MS15 119 aa10.58□□□□□ -0.72
RANBP3-208ENST00000587263 FAM74A7A6NL05 159 aa10.58□□□□□ -0.72
RANBP3-208ENST00000587263 MT-ND4LP03901 98 aa10.58□□□□□ -0.72
RANBP3-208ENST00000587263 LCN15Q6UWW0 184 aa10.58□□□□□ -0.72
RANBP3-208ENST00000587263 TCF24Q7RTU0 167 aa10.58□□□□□ -0.72
RANBP3-208ENST00000587263 ZNF114Q8NC26 417 aa10.58□□□□□ -0.72
RANBP3-208ENST00000587263 RAB24Q969Q5 203 aa10.58□□□□□ -0.72
RANBP3-208ENST00000587263 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
RANBP3-208ENST00000587263 GNG13Q9P2W3 67 aa10.58□□□□□ -0.72
RANBP3-208ENST00000587263 TMA7Q9Y2S6 64 aaKnown RBP10.58□□□□□ -0.72
RANBP3-208ENST00000587263 IGHV3-21A0A0B4J1V1 117 aa10.57□□□□□ -0.72
RANBP3-208ENST00000587263 TRAV2A0A0B4J234 112 aa10.57□□□□□ -0.72
RANBP3-208ENST00000587263 A0A1W2PPV4 95 aa10.57□□□□□ -0.72
RANBP3-208ENST00000587263 F8W735 103 aaPredicted RBP10.57□□□□□ -0.72
RANBP3-208ENST00000587263 YIF1AO95070 293 aa10.57□□□□□ -0.72
RANBP3-208ENST00000587263 MT-CO2P00403 227 aa10.57□□□□□ -0.72
RANBP3-208ENST00000587263 GIG44P09565 113 aaPredicted RBP10.57□□□□□ -0.72
RANBP3-208ENST00000587263 RNASE2P10153 161 aaKnown RBP10.57□□□□□ -0.72
RANBP3-208ENST00000587263 CDC34P49427 236 aaPredicted RBP10.57□□□□□ -0.72
RANBP3-208ENST00000587263 FLI1Q01543 452 aaPredicted RBP10.57□□□□□ -0.72
RANBP3-208ENST00000587263 MEF2BQ02080 365 aaPredicted RBP10.57□□□□□ -0.72
RANBP3-208ENST00000587263 ETFRF1Q6IPR1 90 aa10.57□□□□□ -0.72
RANBP3-208ENST00000587263 OR10W1Q8NGF6 305 aa10.57□□□□□ -0.72
RANBP3-208ENST00000587263 RXFP4Q8TDU9 374 aa10.57□□□□□ -0.72
RANBP3-208ENST00000587263 VSIRQ9H7M9 311 aa10.57□□□□□ -0.72
RANBP3-208ENST00000587263 H3BQ15 152 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 CORTO00230 105 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 NUPL2O15504 423 aaKnown RBP10.56□□□□□ -0.72
RANBP3-208ENST00000587263 PDE6DO43924 150 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 CLN5O75503 358 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 CXorf1O96002 111 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 CTSGP08311 255 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 OR13C7P0DN81 318 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 RHOBP62745 196 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 SPINK9Q5DT21 86 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 TRPT1Q86TN4 253 aaKnown RBP10.56□□□□□ -0.72
RANBP3-208ENST00000587263 FAM210BQ96KR6 192 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 MGST2Q99735 147 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 CTDSP1Q9GZU7 261 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 MS4A6AQ9H2W1 248 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 SLC45A2Q9UMX9 530 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 F11RQ9Y624 299 aaKnown RBP10.56□□□□□ -0.72
RANBP3-208ENST00000587263 PXMP4Q9Y6I8 212 aa10.56□□□□□ -0.72
RANBP3-208ENST00000587263 IGHV3OR16-13A0A075B7E8 117 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 IGHV3-74A0A0B4J1X5 117 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 LOC105371267A0A1B0GV96 52 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 F6UZH7 168 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 K7EIM0 57 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 M0R036 132 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 STAG3L2P0CL84 134 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 STAG3L3P0CL85 134 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 SELENOTP62341 195 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 WT1-ASQ06250 92 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.55□□□□□ -0.72
RANBP3-208ENST00000587263 RPS10P5Q9NQ39 176 aa10.55□□□□□ -0.72
RANBP3-208ENST00000587263 COLCA2A8K830 154 aa10.54□□□□□ -0.72
RANBP3-208ENST00000587263 TNP2Q05952 138 aa10.54□□□□□ -0.72
RANBP3-208ENST00000587263 FAM122CQ6P4D5 195 aa10.54□□□□□ -0.72
RANBP3-208ENST00000587263 ZNF414Q96IQ9 312 aa10.54□□□□□ -0.72
RANBP3-208ENST00000587263 LRP1BQ9NZR2 4599 aa10.53□□□□□ -0.72
RANBP3-208ENST00000587263 ZFP92A6NM28 416 aa10.53□□□□□ -0.72
RANBP3-208ENST00000587263 B2MP61769 119 aa10.53□□□□□ -0.72
RANBP3-208ENST00000587263 RPL11P62913 178 aaKnown RBP10.53□□□□□ -0.72
RANBP3-208ENST00000587263 CYP2G1PQ6ZSU1 146 aa10.53□□□□□ -0.72
RANBP3-208ENST00000587263 FAM24BQ8N5W8 94 aa10.53□□□□□ -0.72
RANBP3-208ENST00000587263 THAP8Q8NA92 274 aa10.53□□□□□ -0.72
RANBP3-208ENST00000587263 HINT2Q9BX68 163 aa10.53□□□□□ -0.72
RANBP3-208ENST00000587263 MRPL32Q9BYC8 188 aaKnown RBP10.53□□□□□ -0.72
RANBP3-208ENST00000587263 NAT8Q9UHE5 227 aa10.53□□□□□ -0.72
RANBP3-208ENST00000587263 PUS1Q9Y606 427 aaKnown RBP eCLIP10.53□□□□□ -0.72
RANBP3-208ENST00000587263 A0A1B0GV50 99 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 LINC00869P0C866 280 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 TAS2R45P59539 299 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 GAMTQ14353 236 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 TMEM88Q6PEY1 159 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 SSX7Q7RTT5 188 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 CBLN2Q8IUK8 224 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 CSNK1G2-AS1Q8NCQ2 148 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 OR1P1Q8NH06 330 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 SLC25A22Q9H936 323 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 SDF2L1Q9HCN8 221 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 TMEM167BQ9NRX6 74 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 CLEC5AQ9NY25 188 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 DOK5Q9P104 306 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 RABAC1Q9UI14 185 aa10.52□□□□□ -0.73
RANBP3-208ENST00000587263 TMEM241Q24JQ0 296 aa10.51□□□□□ -0.73
RANBP3-208ENST00000587263 PQLC2Q6ZP29 291 aa10.51□□□□□ -0.73
RANBP3-208ENST00000587263 GRAMD2BQ96HH9 432 aa10.51□□□□□ -0.73
RANBP3-208ENST00000587263 TXN2Q99757 166 aa10.51□□□□□ -0.73
RANBP3-208ENST00000587263 APOBP04114 4563 aaKnown RBP10.51□□□□□ -0.73
RANBP3-208ENST00000587263 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
RANBP3-208ENST00000587263 OR5G3P0C626 314 aa10.5□□□□□ -0.73
RANBP3-208ENST00000587263 RND2P52198 227 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms