RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 CYB561D1Q8N8Q1 229 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 MS4A6AQ9H2W1 248 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 CMYA5Q8N3K9 4069 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 SLC25A5P05141 298 aaKnown RBP11.19□□□□□ -0.62
NFIX-208ENST00000587260 SFTA3P0C7M3 94 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 PAFAH1B2P68402 229 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 LCN12Q6JVE5 192 aa11.19□□□□□ -0.62
NFIX-208ENST00000587260 RPUSD4Q96CM3 377 aaKnown RBP11.19□□□□□ -0.62
NFIX-208ENST00000587260 SCO2A0A1W2PP80 73 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 KRBOX1C9JBD0 128 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 K7EQG2 157 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 TCRAP04437 139 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 C10orf91Q5T1B1 145 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 OR2K2Q8NGT1 345 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 CMTM2Q8TAZ6 248 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 C2CD4CQ8TF44 421 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 C16orf92Q96LL3 132 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 ATG101Q9BSB4 218 aa11.18□□□□□ -0.62
NFIX-208ENST00000587260 G3V4G9 280 aa11.17□□□□□ -0.62
NFIX-208ENST00000587260 DNASE2O00115 360 aaPredicted RBP11.17□□□□□ -0.62
NFIX-208ENST00000587260 PEX7O00628 323 aa11.17□□□□□ -0.62
NFIX-208ENST00000587260 ATP6V1G1O75348 118 aa11.17□□□□□ -0.62
NFIX-208ENST00000587260 ID1P41134 155 aa11.17□□□□□ -0.62
NFIX-208ENST00000587260 SOHLH1Q5JUK2 328 aa11.17□□□□□ -0.62
NFIX-208ENST00000587260 SEC11CQ9BY50 192 aa11.17□□□□□ -0.62
NFIX-208ENST00000587260 KLF12Q9Y4X4 402 aa11.17□□□□□ -0.62
NFIX-208ENST00000587260 SERTM2A0A1B0GWG4 89 aa11.16□□□□□ -0.62
NFIX-208ENST00000587260 DIRC3C9JPN6 131 aa11.16□□□□□ -0.62
NFIX-208ENST00000587260 M0R3E3 92 aa11.16□□□□□ -0.62
NFIX-208ENST00000587260 ADCYAP1P18509 176 aa11.16□□□□□ -0.62
NFIX-208ENST00000587260 CSN1S1P47710 185 aa11.16□□□□□ -0.62
NFIX-208ENST00000587260 PSG3Q16557 428 aa11.16□□□□□ -0.62
NFIX-208ENST00000587260 FAM74A3Q4VXF1 159 aa11.16□□□□□ -0.62
NFIX-208ENST00000587260 IGFL4Q6B9Z1 124 aa11.16□□□□□ -0.62
NFIX-208ENST00000587260 SPAG8Q99932 426 aaPredicted RBP11.16□□□□□ -0.62
NFIX-208ENST00000587260 GPR61Q9BZJ8 451 aa11.16□□□□□ -0.62
NFIX-208ENST00000587260 S100A9P06702 114 aaKnown RBP11.15□□□□□ -0.62
NFIX-208ENST00000587260 HLA-DMBP28068 263 aa11.15□□□□□ -0.62
NFIX-208ENST00000587260 GNG5P63218 68 aa11.15□□□□□ -0.62
NFIX-208ENST00000587260 FAM24BQ8N5W8 94 aa11.15□□□□□ -0.62
NFIX-208ENST00000587260 RNF182Q8N6D2 247 aa11.15□□□□□ -0.62
NFIX-208ENST00000587260 PARLQ9H300 379 aa11.15□□□□□ -0.62
NFIX-208ENST00000587260 CARHSP1Q9Y2V2 147 aaKnown RBP11.15□□□□□ -0.62
NFIX-208ENST00000587260 FBN3Q75N90 2809 aa11.15□□□□□ -0.62
NFIX-208ENST00000587260 NOTCH3Q9UM47 2321 aa11.15□□□□□ -0.63
NFIX-208ENST00000587260 OR4C46A6NHA9 309 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 F8W036 122 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 WIPF1O43516 503 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 PRB4P10163 310 aaPredicted RBP11.14□□□□□ -0.63
NFIX-208ENST00000587260 TAS2R60P59551 318 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 TMEM183BQ1AE95 376 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 LINC00052Q96N35 136 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 TRBV6-1A0A0K0K1D8 114 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 RBAKDNA6NC62 111 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 K7EQM0 130 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 ZNF688P0C7X2 276 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 S100A1P23297 94 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 AKR1C3P42330 323 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 RPL35P42766 123 aaKnown RBP11.14□□□□□ -0.63
NFIX-208ENST00000587260 CNN1P51911 297 aaKnown RBP11.14□□□□□ -0.63
NFIX-208ENST00000587260 CEBPGP53567 150 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 SNRPD3P62318 126 aaKnown RBP11.14□□□□□ -0.63
NFIX-208ENST00000587260 SAMD5Q5TGI4 173 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 DERL1Q9BUN8 251 aa11.14□□□□□ -0.63
NFIX-208ENST00000587260 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
NFIX-208ENST00000587260 FBLL1A6NHQ2 334 aaKnown RBP11.13□□□□□ -0.63
NFIX-208ENST00000587260 ZNF727A8MUV8 499 aa11.13□□□□□ -0.63
NFIX-208ENST00000587260 ZNF705FA8MVS1 300 aaPredicted RBP11.13□□□□□ -0.63
NFIX-208ENST00000587260 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
NFIX-208ENST00000587260 GOLT1AQ6ZVE7 132 aa11.13□□□□□ -0.63
NFIX-208ENST00000587260 TMEM75Q8N9X5 138 aa11.13□□□□□ -0.63
NFIX-208ENST00000587260 LINC00479Q96M42 142 aa11.13□□□□□ -0.63
NFIX-208ENST00000587260 SMIM7Q9BQ49 75 aa11.13□□□□□ -0.63
NFIX-208ENST00000587260 C9JCJ5 164 aa11.12□□□□□ -0.63
NFIX-208ENST00000587260 PRAC2D3DTV9 90 aa11.12□□□□□ -0.63
NFIX-208ENST00000587260 PSMG4Q5JS54 123 aa11.12□□□□□ -0.63
NFIX-208ENST00000587260 FMC1Q96HJ9 113 aa11.12□□□□□ -0.63
NFIX-208ENST00000587260 PRR25Q96S07 402 aa11.12□□□□□ -0.63
NFIX-208ENST00000587260 LY96Q9Y6Y9 160 aa11.12□□□□□ -0.63
NFIX-208ENST00000587260 TRBV20OR9-2A0A075B6H5 130 aa11.11□□□□□ -0.63
NFIX-208ENST00000587260 CD7P09564 240 aa11.11□□□□□ -0.63
NFIX-208ENST00000587260 KRTAP10-11P60412 298 aa11.11□□□□□ -0.63
NFIX-208ENST00000587260 ZNF674Q2M3X9 581 aa11.11□□□□□ -0.63
NFIX-208ENST00000587260 ZNF738Q8NE65 137 aa11.11□□□□□ -0.63
NFIX-208ENST00000587260 MAP6D1Q9H9H5 199 aa11.11□□□□□ -0.63
NFIX-208ENST00000587260 PPP1R14DQ9NXH3 145 aa11.11□□□□□ -0.63
NFIX-208ENST00000587260 RPH3ALQ9UNE2 315 aa11.11□□□□□ -0.63
NFIX-208ENST00000587260 TMEM241Q24JQ0 296 aa11.1□□□□□ -0.63
NFIX-208ENST00000587260 BEAN1Q3B7T3 259 aa11.1□□□□□ -0.63
NFIX-208ENST00000587260 ODF3L2Q3SX64 289 aa11.1□□□□□ -0.63
NFIX-208ENST00000587260 C9orf47Q6ZRZ4 202 aa11.1□□□□□ -0.63
NFIX-208ENST00000587260 IGF2BP2-AS1Q96M15 143 aa11.1□□□□□ -0.63
NFIX-208ENST00000587260 FAM110AQ9BQ89 295 aa11.1□□□□□ -0.63
NFIX-208ENST00000587260 NIPSNAP3BQ9BS92 247 aa11.1□□□□□ -0.63
NFIX-208ENST00000587260 WFDC10AQ9H1F0 79 aa11.1□□□□□ -0.63
NFIX-208ENST00000587260 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
NFIX-208ENST00000587260 TRAV34A0A0B4J273 112 aa11.09□□□□□ -0.63
NFIX-208ENST00000587260 LTAP01374 205 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms