RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 TP53TG1Q9Y2A0 90 aa12.66□□□□□ -0.38
DNMT1-212ENST00000587197 UMAD1C9J7I0 102 aa12.65□□□□□ -0.38
DNMT1-212ENST00000587197 OR10J4P0C629 311 aa12.65□□□□□ -0.38
DNMT1-212ENST00000587197 HLA-DMBP28068 263 aa12.65□□□□□ -0.38
DNMT1-212ENST00000587197 NUTF2P61970 127 aaKnown RBP12.65□□□□□ -0.38
DNMT1-212ENST00000587197 UBE2L3P68036 154 aaKnown RBP12.65□□□□□ -0.38
DNMT1-212ENST00000587197 BLNKQ8WV28 456 aa12.65□□□□□ -0.38
DNMT1-212ENST00000587197 RPUSD4Q96CM3 377 aaKnown RBP12.65□□□□□ -0.38
DNMT1-212ENST00000587197 AGRNO00468 2067 aa12.65□□□□□ -0.39
DNMT1-212ENST00000587197 CTXND1A0A1B0GTU2 59 aa12.64□□□□□ -0.39
DNMT1-212ENST00000587197 F6UB75 175 aa12.64□□□□□ -0.39
DNMT1-212ENST00000587197 DEFB1P60022 68 aa12.64□□□□□ -0.39
DNMT1-212ENST00000587197 C9orf62Q8N4C0 152 aa12.64□□□□□ -0.39
DNMT1-212ENST00000587197 OR8A1Q8NGG7 326 aa12.64□□□□□ -0.39
DNMT1-212ENST00000587197 AAMDCQ9H7C9 122 aa12.64□□□□□ -0.39
DNMT1-212ENST00000587197 RETNQ9HD89 108 aa12.64□□□□□ -0.39
DNMT1-212ENST00000587197 GIG44P09565 113 aaPredicted RBP12.63□□□□□ -0.39
DNMT1-212ENST00000587197 SLC51BQ86UW2 128 aa12.63□□□□□ -0.39
DNMT1-212ENST00000587197 SUN5Q8TC36 379 aa12.63□□□□□ -0.39
DNMT1-212ENST00000587197 RNF183Q96D59 192 aa12.63□□□□□ -0.39
DNMT1-212ENST00000587197 EIF3GO75821 320 aaKnown RBP eCLIP12.62□□□□□ -0.39
DNMT1-212ENST00000587197 CXorf1O96002 111 aa12.62□□□□□ -0.39
DNMT1-212ENST00000587197 CA1P00915 261 aaPredicted RBP12.62□□□□□ -0.39
DNMT1-212ENST00000587197 ARL14EPLP0DKL9 152 aa12.62□□□□□ -0.39
DNMT1-212ENST00000587197 CNN1P51911 297 aaKnown RBP12.62□□□□□ -0.39
DNMT1-212ENST00000587197 ZNF726P1Q15940 193 aa12.62□□□□□ -0.39
DNMT1-212ENST00000587197 EIF5AL1Q6IS14 154 aaKnown RBP12.62□□□□□ -0.39
DNMT1-212ENST00000587197 OR4B1Q8NGF8 309 aa12.62□□□□□ -0.39
DNMT1-212ENST00000587197 PHYHIPLQ96FC7 376 aa12.62□□□□□ -0.39
DNMT1-212ENST00000587197 OVOL2Q9BRP0 275 aa12.62□□□□□ -0.39
DNMT1-212ENST00000587197 C1QTNF4Q9BXJ3 329 aa12.62□□□□□ -0.39
DNMT1-212ENST00000587197 ZNF705FA8MVS1 300 aaPredicted RBP12.61□□□□□ -0.39
DNMT1-212ENST00000587197 HMGB3O15347 200 aaKnown RBP12.61□□□□□ -0.39
DNMT1-212ENST00000587197 SPRY2O43597 315 aa12.61□□□□□ -0.39
DNMT1-212ENST00000587197 GCHFRP30047 84 aa12.61□□□□□ -0.39
DNMT1-212ENST00000587197 ZFAND6Q6FIF0 208 aa12.61□□□□□ -0.39
DNMT1-212ENST00000587197 AMTNQ6UX39 209 aa12.61□□□□□ -0.39
DNMT1-212ENST00000587197 DPPA3Q6W0C5 159 aa12.61□□□□□ -0.39
DNMT1-212ENST00000587197 ARL6IP6Q8N6S5 226 aa12.61□□□□□ -0.39
DNMT1-212ENST00000587197 TMEM167BQ9NRX6 74 aa12.61□□□□□ -0.39
DNMT1-212ENST00000587197 PLA2G2EQ9NZK7 142 aa12.61□□□□□ -0.39
DNMT1-212ENST00000587197 M0R3E3 92 aa12.6□□□□□ -0.39
DNMT1-212ENST00000587197 RANP62826 216 aaKnown RBP12.6□□□□□ -0.39
DNMT1-212ENST00000587197 HIST1H1AQ02539 215 aaPredicted RBP12.6□□□□□ -0.39
DNMT1-212ENST00000587197 ICAM4Q14773 271 aa12.6□□□□□ -0.39
DNMT1-212ENST00000587197 DEFB135Q30KP9 77 aa12.6□□□□□ -0.39
DNMT1-212ENST00000587197 SSX7Q7RTT5 188 aa12.6□□□□□ -0.39
DNMT1-212ENST00000587197 EXOC3-AS1Q8N2X6 119 aa12.6□□□□□ -0.39
DNMT1-212ENST00000587197 OR10J6PQ8NGY7 276 aa12.6□□□□□ -0.39
DNMT1-212ENST00000587197 TMED6Q8WW62 240 aa12.6□□□□□ -0.39
DNMT1-212ENST00000587197 Q9H3A6 140 aa12.6□□□□□ -0.39
DNMT1-212ENST00000587197 OTORQ9NRC9 128 aa12.6□□□□□ -0.39
DNMT1-212ENST00000587197 PRAC2D3DTV9 90 aa12.59□□□□□ -0.39
DNMT1-212ENST00000587197 AMBPP02760 352 aa12.59□□□□□ -0.39
DNMT1-212ENST00000587197 RAB5CP51148 216 aa12.59□□□□□ -0.39
DNMT1-212ENST00000587197 IGKV3-20P01619 116 aa12.58□□□□□ -0.4
DNMT1-212ENST00000587197 ZNF705DP0CH99 300 aaPredicted RBP12.58□□□□□ -0.4
DNMT1-212ENST00000587197 ZNF705BP0CI00 300 aaPredicted RBP12.58□□□□□ -0.4
DNMT1-212ENST00000587197 CSNK1G2-AS1Q8NCQ2 148 aa12.58□□□□□ -0.4
DNMT1-212ENST00000587197 ODF3Q96PU9 254 aa12.58□□□□□ -0.4
DNMT1-212ENST00000587197 MAP1LC3B2A6NCE7 125 aa12.57□□□□□ -0.4
DNMT1-212ENST00000587197 NPIPB6E9PJ23 425 aa12.57□□□□□ -0.4
DNMT1-212ENST00000587197 CSN1S1P47710 185 aa12.57□□□□□ -0.4
DNMT1-212ENST00000587197 FAM74A1Q5RGS3 127 aa12.57□□□□□ -0.4
DNMT1-212ENST00000587197 RXFP4Q8TDU9 374 aa12.57□□□□□ -0.4
DNMT1-212ENST00000587197 MBD3L1Q8WWY6 194 aa12.57□□□□□ -0.4
DNMT1-212ENST00000587197 MAP1LC3BQ9GZQ8 125 aa12.57□□□□□ -0.4
DNMT1-212ENST00000587197 SLC35B3Q9H1N7 401 aa12.57□□□□□ -0.4
DNMT1-212ENST00000587197 BOLA2-SMG1P6H3BVE0 249 aa12.56□□□□□ -0.4
DNMT1-212ENST00000587197 FHITP49789 147 aa12.56□□□□□ -0.4
DNMT1-212ENST00000587197 C9orf47Q6ZRZ4 202 aa12.56□□□□□ -0.4
DNMT1-212ENST00000587197 LINC00477Q96M19 166 aa12.56□□□□□ -0.4
DNMT1-212ENST00000587197 XCL2Q9UBD3 114 aa12.56□□□□□ -0.4
DNMT1-212ENST00000587197 A0A1W2PRE2 83 aa12.55□□□□□ -0.4
DNMT1-212ENST00000587197 RBAKDNA6NC62 111 aa12.55□□□□□ -0.4
DNMT1-212ENST00000587197 PGPA6NDG6 321 aa12.55□□□□□ -0.4
DNMT1-212ENST00000587197 ZNF705EA8MWA4 302 aaPredicted RBP12.55□□□□□ -0.4
DNMT1-212ENST00000587197 SLC25A5P05141 298 aaKnown RBP12.55□□□□□ -0.4
DNMT1-212ENST00000587197 SULT1A2P50226 295 aa12.55□□□□□ -0.4
DNMT1-212ENST00000587197 FAM213BQ8TBF2 198 aa12.55□□□□□ -0.4
DNMT1-212ENST00000587197 IGF2BP2-AS1Q96M15 143 aa12.55□□□□□ -0.4
DNMT1-212ENST00000587197 TSPOP30536 169 aa12.54□□□□□ -0.4
DNMT1-212ENST00000587197 NKX2-5P52952 324 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-212ENST00000587197 OR11H2Q8NH07 326 aa12.54□□□□□ -0.4
DNMT1-212ENST00000587197 CMTM2Q8TAZ6 248 aa12.54□□□□□ -0.4
DNMT1-212ENST00000587197 RARRES2Q99969 163 aa12.54□□□□□ -0.4
DNMT1-212ENST00000587197 NKX6-2Q9C056 277 aaPredicted RBP12.54□□□□□ -0.4
DNMT1-212ENST00000587197 PPP1R14DQ9NXH3 145 aa12.54□□□□□ -0.4
DNMT1-212ENST00000587197 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
DNMT1-212ENST00000587197 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
DNMT1-212ENST00000587197 CT45A10P0DMU9 189 aa12.53□□□□□ -0.4
DNMT1-212ENST00000587197 CDKN1BP46527 198 aa12.53□□□□□ -0.4
DNMT1-212ENST00000587197 FGF8P55075 233 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-212ENST00000587197 FXYD7P58549 80 aa12.53□□□□□ -0.4
DNMT1-212ENST00000587197 SPINK13Q1W4C9 94 aa12.53□□□□□ -0.4
DNMT1-212ENST00000587197 ZNF705AQ6ZN79 300 aaPredicted RBP12.53□□□□□ -0.4
DNMT1-212ENST00000587197 IQCF2Q8IXL9 164 aa12.53□□□□□ -0.4
DNMT1-212ENST00000587197 C5orf17Q8NAS9 161 aa12.53□□□□□ -0.4
DNMT1-212ENST00000587197 SFT2D1Q8WV19 159 aa12.53□□□□□ -0.4
DNMT1-212ENST00000587197 AGPAT4-IT1Q9H0P7 198 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms