RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 ADCYAP1P18509 176 aa8.71□□□□□ -1.02
CDRT1-207ENST00000583965 IQCF2Q8IXL9 164 aa8.71□□□□□ -1.02
CDRT1-207ENST00000583965 TMPRSS5Q9H3S3 457 aa8.71□□□□□ -1.02
CDRT1-207ENST00000583965 AAMDCQ9H7C9 122 aa8.71□□□□□ -1.02
CDRT1-207ENST00000583965 PRELID1Q9Y255 219 aa8.71□□□□□ -1.02
CDRT1-207ENST00000583965 SLC17A3O00476 420 aa8.7□□□□□ -1.02
CDRT1-207ENST00000583965 NDUFB4O95168 129 aa8.7□□□□□ -1.02
CDRT1-207ENST00000583965 SNRPCP09234 159 aaKnown RBP8.7□□□□□ -1.02
CDRT1-207ENST00000583965 KRTAP10-11P60412 298 aa8.7□□□□□ -1.02
CDRT1-207ENST00000583965 MEF2BQ02080 365 aaPredicted RBP8.7□□□□□ -1.02
CDRT1-207ENST00000583965 RXFP4Q8TDU9 374 aa8.7□□□□□ -1.02
CDRT1-207ENST00000583965 MRPL53Q96EL3 112 aaKnown RBP8.7□□□□□ -1.02
CDRT1-207ENST00000583965 NKX6-2Q9C056 277 aaPredicted RBP8.7□□□□□ -1.02
CDRT1-207ENST00000583965 DNAH3Q8TD57 4116 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 TRAV8-2A0A0B4J237 113 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 A0A1W2PRE2 83 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 OR11H12B2RN74 326 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 F8W036 122 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 TMEM250H0YL14 139 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 H3BTX0 84 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 CD7P09564 240 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 ZNF688P0C7X2 276 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 CD81P60033 236 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 PSG3Q16557 428 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 ODF3L2Q3SX64 289 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 FAM24BQ8N5W8 94 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 ARL6IP6Q8N6S5 226 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 Q9H3A6 140 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 MAP6D1Q9H9H5 199 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 OTORQ9NRC9 128 aa8.69□□□□□ -1.02
CDRT1-207ENST00000583965 FAM74A7A6NL05 159 aa8.68□□□□□ -1.02
CDRT1-207ENST00000583965 PDE6DO43924 150 aa8.68□□□□□ -1.02
CDRT1-207ENST00000583965 PAGE4O60829 102 aa8.68□□□□□ -1.02
CDRT1-207ENST00000583965 DEFB131AP59861 70 aa8.68□□□□□ -1.02
CDRT1-207ENST00000583965 RANP62826 216 aaKnown RBP8.68□□□□□ -1.02
CDRT1-207ENST00000583965 PSMG4Q5JS54 123 aa8.68□□□□□ -1.02
CDRT1-207ENST00000583965 PRR25Q96S07 402 aa8.68□□□□□ -1.02
CDRT1-207ENST00000583965 C19orf73Q9NVV2 129 aa8.68□□□□□ -1.02
CDRT1-207ENST00000583965 C11orf94C9JXX5 98 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 F6UZH7 168 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 SOHLH1Q5JUK2 328 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 IGFL4Q6B9Z1 124 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 CCDC28AQ8IWP9 274 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 EXOC3-AS1Q8N2X6 119 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 SVBPQ8N300 66 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 RNF182Q8N6D2 247 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 CYB561D1Q8N8Q1 229 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 ZNF738Q8NE65 137 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 C20orf173Q96LM9 149 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 TCEAL7Q9BRU2 100 aa8.67□□□□□ -1.02
CDRT1-207ENST00000583965 PGPA6NDG6 321 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 APOC3P02656 99 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 HLA-DMBP28068 263 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 CSN1S1P47710 185 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 UBE2G2P60604 165 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 FAM74A3Q4VXF1 159 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 FOXI2Q6ZQN5 318 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 Q8N1Y9 231 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 C5orf17Q8NAS9 161 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 C11orf52Q96A22 123 aa8.66□□□□□ -1.02
CDRT1-207ENST00000583965 RPUSD4Q96CM3 377 aaKnown RBP8.66□□□□□ -1.02
CDRT1-207ENST00000583965 YTHDF2Q9Y5A9 579 aaKnown RBP8.66□□□□□ -1.02
CDRT1-207ENST00000583965 GGTLC3B5MD39 225 aa8.65□□□□□ -1.02
CDRT1-207ENST00000583965 SNAPINO95295 136 aa8.65□□□□□ -1.02
CDRT1-207ENST00000583965 SUMO1P63165 101 aaKnown RBP8.65□□□□□ -1.02
CDRT1-207ENST00000583965 CST9LP1Q5W188 147 aa8.65□□□□□ -1.02
CDRT1-207ENST00000583965 EBLN2Q6P2I7 272 aa8.65□□□□□ -1.02
CDRT1-207ENST00000583965 CMTM2Q8TAZ6 248 aa8.65□□□□□ -1.02
CDRT1-207ENST00000583965 SAV1Q9H4B6 383 aaPredicted RBP8.65□□□□□ -1.02
CDRT1-207ENST00000583965 A0A0J9YX75 114 aa8.64□□□□□ -1.03
CDRT1-207ENST00000583965 SERTM2A0A1B0GWG4 89 aa8.64□□□□□ -1.03
CDRT1-207ENST00000583965 M0R3E3 92 aa8.64□□□□□ -1.03
CDRT1-207ENST00000583965 DUSP14O95147 198 aaKnown RBP8.64□□□□□ -1.03
CDRT1-207ENST00000583965 SLC25A5P05141 298 aaKnown RBP8.64□□□□□ -1.03
CDRT1-207ENST00000583965 HLA-DRB4P13762 266 aa8.64□□□□□ -1.03
CDRT1-207ENST00000583965 ATP5G3P48201 142 aa8.64□□□□□ -1.03
CDRT1-207ENST00000583965 APRG1Q8IVJ8 170 aa8.64□□□□□ -1.03
CDRT1-207ENST00000583965 DEFB125Q8N687 156 aa8.64□□□□□ -1.03
CDRT1-207ENST00000583965 OR10J6PQ8NGY7 276 aa8.64□□□□□ -1.03
CDRT1-207ENST00000583965 AURKAIP1Q9NWT8 199 aaPredicted RBP8.64□□□□□ -1.03
CDRT1-207ENST00000583965 HLA-DRB4X5D2U9 266 aa8.64□□□□□ -1.03
CDRT1-207ENST00000583965 RBAKDNA6NC62 111 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 ZNF705FA8MVS1 300 aaPredicted RBP8.63□□□□□ -1.03
CDRT1-207ENST00000583965 A8MZ25 164 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 DIRC3C9JPN6 131 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 K7EQM0 130 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 STHQ8IWL8 128 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 OR8A1Q8NGG7 326 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 HIST1H2BAQ96A08 127 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 CLUHP3Q96NS8 147 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 WFDC10AQ9H1F0 79 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 SRD5A3Q9H8P0 318 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 EPDR1Q9UM22 224 aa8.63□□□□□ -1.03
CDRT1-207ENST00000583965 KNCNA6PVL3 124 aa8.62□□□□□ -1.03
CDRT1-207ENST00000583965 A8MTW9 85 aa8.62□□□□□ -1.03
CDRT1-207ENST00000583965 H3BMM0 161 aa8.62□□□□□ -1.03
CDRT1-207ENST00000583965 PNRC1Q12796 327 aaPredicted RBP8.62□□□□□ -1.03
CDRT1-207ENST00000583965 ZNF124Q15973 351 aa8.62□□□□□ -1.03
CDRT1-207ENST00000583965 ACTL10Q5JWF8 245 aa8.62□□□□□ -1.03
CDRT1-207ENST00000583965 CLRN3Q8NCR9 226 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms