RNA–Protein interactions for RNA: ENST00000582352.1

SHMT1-208, Transcript of serine hydroxymethyltransferase 1, humanhuman

Gene SHMT1, Length 2,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-208ENST00000582352 OR9G4Q8NGQ1 327 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 THYN1Q9P016 225 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 IGKV2-40A0A087WW87 121 aaPredicted RBP9.58□□□□□ -0.88
SHMT1-208ENST00000582352 A1L4Q6 167 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 B9A039 149 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 LY6LH3BQJ8 138 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 IGKV2D-40P01614 121 aaPredicted RBP9.58□□□□□ -0.88
SHMT1-208ENST00000582352 HSD52Q0P140 79 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 IFI27L1Q96BM0 104 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 A0A1W2PRD5 423 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 A0A1W2PRF3 423 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 A0A1W2PRM7 423 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 TWIST1Q15672 202 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 FER1L6-AS1Q8NA97 138 aa9.58□□□□□ -0.88
SHMT1-208ENST00000582352 C9orf118A6NHY6 69 aa9.57□□□□□ -0.88
SHMT1-208ENST00000582352 H3BRM9 83 aa9.57□□□□□ -0.88
SHMT1-208ENST00000582352 MFAP4P55083 255 aa9.57□□□□□ -0.88
SHMT1-208ENST00000582352 BCL6BQ8N143 479 aaPredicted RBP9.57□□□□□ -0.88
SHMT1-208ENST00000582352 HILPDAQ9Y5L2 63 aa9.57□□□□□ -0.88
SHMT1-208ENST00000582352 ZNF318Q5VUA4 2279 aa9.57□□□□□ -0.88
SHMT1-208ENST00000582352 SMKR1H3BMG3 65 aa9.57□□□□□ -0.88
SHMT1-208ENST00000582352 NMUP48645 174 aa9.57□□□□□ -0.88
SHMT1-208ENST00000582352 NPYP01303 97 aa9.56□□□□□ -0.88
SHMT1-208ENST00000582352 CD3EP07766 207 aa9.56□□□□□ -0.88
SHMT1-208ENST00000582352 RPL7P18124 248 aaKnown RBP9.56□□□□□ -0.88
SHMT1-208ENST00000582352 HES1Q14469 280 aa9.56□□□□□ -0.88
SHMT1-208ENST00000582352 OR4X2Q8NGF9 303 aa9.56□□□□□ -0.88
SHMT1-208ENST00000582352 PRR25Q96S07 402 aa9.56□□□□□ -0.88
SHMT1-208ENST00000582352 H3BUT2 72 aa9.56□□□□□ -0.88
SHMT1-208ENST00000582352 KIR3DS1Q14943 382 aa9.56□□□□□ -0.88
SHMT1-208ENST00000582352 Q8TAT8 98 aa9.56□□□□□ -0.88
SHMT1-208ENST00000582352 ANKRD11Q6UB99 2663 aaPredicted RBP9.55□□□□□ -0.88
SHMT1-208ENST00000582352 FBLL1A6NHQ2 334 aaKnown RBP9.55□□□□□ -0.88
SHMT1-208ENST00000582352 SIVA1O15304 175 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 EGR2P11161 476 aaPredicted RBP9.55□□□□□ -0.88
SHMT1-208ENST00000582352 BMI1P35226 326 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 PAX8Q06710 450 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 JMJD8Q96S16 334 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 COL25A1Q9BXS0 654 aaPredicted RBP9.55□□□□□ -0.88
SHMT1-208ENST00000582352 DPM3Q9P2X0 92 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 POLEQ07864 2286 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 APC2O95996 2303 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 IGLV11-55A0A075B6I3 123 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 A0A0G2JLM5 398 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.55□□□□□ -0.88
SHMT1-208ENST00000582352 CEACAM3P40198 252 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 UFSP1Q6NVU6 142 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 COX8CQ7Z4L0 72 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 ZNF48Q96MX3 618 aaPredicted RBP9.55□□□□□ -0.88
SHMT1-208ENST00000582352 C21orf62Q9NYP8 219 aa9.55□□□□□ -0.88
SHMT1-208ENST00000582352 ACACAQ13085 2346 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 TACC2O95359 2948 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 NPIPB5A8MRT5 1133 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 SCGB2A1O75556 95 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 NDUFA3O95167 84 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 MAP1LC3AQ9H492 121 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 ATMQ13315 3056 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 K7EP34 96 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 NDUFS7O75251 213 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 C5orf64Q2M2E5 130 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 ADAMTSL5Q6ZMM2 481 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 WFDC3Q8IUB2 231 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 NPBQ8NG41 125 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 CFHR4Q92496 578 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 ARPC1AQ92747 370 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 ABHD17AQ96GS6 310 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 C18orf15Q96N68 181 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 FANCD2OSQ96PS1 177 aa9.54□□□□□ -0.88
SHMT1-208ENST00000582352 NAA38Q9BRA0 125 aaKnown RBP9.54□□□□□ -0.88
SHMT1-208ENST00000582352 PCP2Q8IVA1 136 aa9.53□□□□□ -0.88
SHMT1-208ENST00000582352 RAB37Q96AX2 223 aa9.53□□□□□ -0.88
SHMT1-208ENST00000582352 MEGF9Q9H1U4 602 aa9.53□□□□□ -0.88
SHMT1-208ENST00000582352 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
SHMT1-208ENST00000582352 IGLC6P0CF74 106 aa9.53□□□□□ -0.88
SHMT1-208ENST00000582352 IGFBPL1Q8WX77 278 aa9.53□□□□□ -0.88
SHMT1-208ENST00000582352 VGLL1Q99990 258 aa9.53□□□□□ -0.88
SHMT1-208ENST00000582352 DKK2Q9UBU2 259 aa9.53□□□□□ -0.88
SHMT1-208ENST00000582352 GVINP1Q7Z2Y8 2422 aa9.53□□□□□ -0.88
SHMT1-208ENST00000582352 F8W735 103 aaPredicted RBP9.52□□□□□ -0.88
SHMT1-208ENST00000582352 SAP30O75446 220 aa9.52□□□□□ -0.88
SHMT1-208ENST00000582352 ORM1P02763 201 aa9.52□□□□□ -0.88
SHMT1-208ENST00000582352 ZNF80P51504 273 aaPredicted RBP9.52□□□□□ -0.88
SHMT1-208ENST00000582352 PRSS57Q6UWY2 283 aa9.52□□□□□ -0.88
SHMT1-208ENST00000582352 OR2K2Q8NGT1 345 aa9.52□□□□□ -0.88
SHMT1-208ENST00000582352 TTC28Q96AY4 2481 aa9.52□□□□□ -0.89
SHMT1-208ENST00000582352 BSNQ9UPA5 3926 aa9.52□□□□□ -0.89
SHMT1-208ENST00000582352 OR11H6Q8NGC7 330 aa9.52□□□□□ -0.89
SHMT1-208ENST00000582352 AKAP13Q12802 2813 aa9.52□□□□□ -0.89
SHMT1-208ENST00000582352 NCBP2LA6PVI3 153 aaKnown RBP9.52□□□□□ -0.89
SHMT1-208ENST00000582352 KLRD1Q13241 179 aa9.52□□□□□ -0.89
SHMT1-208ENST00000582352 ZNF672Q499Z4 452 aaPredicted RBP9.52□□□□□ -0.89
SHMT1-208ENST00000582352 IGFL4Q6B9Z1 124 aa9.52□□□□□ -0.89
SHMT1-208ENST00000582352 NPFFR1Q9GZQ6 430 aa9.52□□□□□ -0.89
SHMT1-208ENST00000582352 SELENOKQ9Y6D0 94 aa9.52□□□□□ -0.89
SHMT1-208ENST00000582352 PIEZO2Q9H5I5 2752 aa9.51□□□□□ -0.89
SHMT1-208ENST00000582352 ZNF562Q6V9R5 426 aa9.51□□□□□ -0.89
SHMT1-208ENST00000582352 Q8NA96 180 aa9.51□□□□□ -0.89
SHMT1-208ENST00000582352 LY6G5BQ8NDX9 201 aa9.51□□□□□ -0.89
SHMT1-208ENST00000582352 CSTL1Q9H114 145 aa9.51□□□□□ -0.89
SHMT1-208ENST00000582352 S100A7P31151 101 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms