RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 F6UB75 175 aa14.74□□□□□ -0.05
TOP3A-213ENST00000582230 GCHFRP30047 84 aa14.74□□□□□ -0.05
TOP3A-213ENST00000582230 NKX2-5P52952 324 aaPredicted RBP14.74□□□□□ -0.05
TOP3A-213ENST00000582230 ZMAT4Q9H898 229 aa14.74□□□□□ -0.05
TOP3A-213ENST00000582230 PLA2G2EQ9NZK7 142 aa14.74□□□□□ -0.05
TOP3A-213ENST00000582230 RANP62826 216 aaKnown RBP14.73□□□□□ -0.05
TOP3A-213ENST00000582230 Q6ZWC4 215 aa14.73□□□□□ -0.05
TOP3A-213ENST00000582230 SSX7Q7RTT5 188 aa14.73□□□□□ -0.05
TOP3A-213ENST00000582230 EXOC3-AS1Q8N2X6 119 aa14.73□□□□□ -0.05
TOP3A-213ENST00000582230 OR4B1Q8NGF8 309 aa14.73□□□□□ -0.05
TOP3A-213ENST00000582230 OR8A1Q8NGG7 326 aa14.73□□□□□ -0.05
TOP3A-213ENST00000582230 SUN5Q8TC36 379 aa14.73□□□□□ -0.05
TOP3A-213ENST00000582230 PHYHIPLQ96FC7 376 aa14.73□□□□□ -0.05
TOP3A-213ENST00000582230 SPATA25Q9BR10 227 aa14.73□□□□□ -0.05
TOP3A-213ENST00000582230 TMEM167BQ9NRX6 74 aa14.73□□□□□ -0.05
TOP3A-213ENST00000582230 ZNF705FA8MVS1 300 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-213ENST00000582230 RAB5CP51148 216 aa14.72□□□□□ -0.05
TOP3A-213ENST00000582230 ICAM4Q14773 271 aa14.72□□□□□ -0.05
TOP3A-213ENST00000582230 A8MTW9 85 aa14.71□□□□□ -0.05
TOP3A-213ENST00000582230 CA1P00915 261 aaPredicted RBP14.71□□□□□ -0.05
TOP3A-213ENST00000582230 CNN1P51911 297 aaKnown RBP14.71□□□□□ -0.05
TOP3A-213ENST00000582230 HIST1H1AQ02539 215 aaPredicted RBP14.71□□□□□ -0.05
TOP3A-213ENST00000582230 FAM74A1Q5RGS3 127 aa14.71□□□□□ -0.05
TOP3A-213ENST00000582230 OR10J6PQ8NGY7 276 aa14.71□□□□□ -0.05
TOP3A-213ENST00000582230 FAM213BQ8TBF2 198 aa14.71□□□□□ -0.05
TOP3A-213ENST00000582230 Q9H3A6 140 aa14.71□□□□□ -0.05
TOP3A-213ENST00000582230 MAP1LC3B2A6NCE7 125 aa14.7□□□□□ -0.06
TOP3A-213ENST00000582230 M0R3E3 92 aa14.7□□□□□ -0.06
TOP3A-213ENST00000582230 IGKV3-20P01619 116 aa14.7□□□□□ -0.06
TOP3A-213ENST00000582230 FHITP49789 147 aa14.7□□□□□ -0.06
TOP3A-213ENST00000582230 C1QTNF4Q9BXJ3 329 aa14.7□□□□□ -0.06
TOP3A-213ENST00000582230 MAP1LC3BQ9GZQ8 125 aa14.7□□□□□ -0.06
TOP3A-213ENST00000582230 OTORQ9NRC9 128 aa14.7□□□□□ -0.06
TOP3A-213ENST00000582230 TP53TG1Q9Y2A0 90 aa14.7□□□□□ -0.06
TOP3A-213ENST00000582230 ZNF705DP0CH99 300 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-213ENST00000582230 ZNF705BP0CI00 300 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-213ENST00000582230 CSN1S1P47710 185 aa14.69□□□□□ -0.06
TOP3A-213ENST00000582230 IQCF2Q8IXL9 164 aa14.69□□□□□ -0.06
TOP3A-213ENST00000582230 RXFP4Q8TDU9 374 aa14.69□□□□□ -0.06
TOP3A-213ENST00000582230 MBD3L1Q8WWY6 194 aa14.69□□□□□ -0.06
TOP3A-213ENST00000582230 PRAC2D3DTV9 90 aa14.68□□□□□ -0.06
TOP3A-213ENST00000582230 GIG44P09565 113 aaPredicted RBP14.68□□□□□ -0.06
TOP3A-213ENST00000582230 SULT1A2P50226 295 aa14.68□□□□□ -0.06
TOP3A-213ENST00000582230 ARL6IP6Q8N6S5 226 aa14.68□□□□□ -0.06
TOP3A-213ENST00000582230 SFT2D1Q8WV19 159 aa14.68□□□□□ -0.06
TOP3A-213ENST00000582230 PGPA6NDG6 321 aa14.67□□□□□ -0.06
TOP3A-213ENST00000582230 SPRY2O43597 315 aa14.67□□□□□ -0.06
TOP3A-213ENST00000582230 H2AFB1P0C5Y9 115 aa14.67□□□□□ -0.06
TOP3A-213ENST00000582230 FGF8P55075 233 aaPredicted RBP14.67□□□□□ -0.06
TOP3A-213ENST00000582230 DEFB135Q30KP9 77 aa14.67□□□□□ -0.06
TOP3A-213ENST00000582230 AMTNQ6UX39 209 aa14.67□□□□□ -0.06
TOP3A-213ENST00000582230 RNF183Q96D59 192 aa14.67□□□□□ -0.06
TOP3A-213ENST00000582230 RCHY1Q96PM5 261 aa14.67□□□□□ -0.06
TOP3A-213ENST00000582230 PPP1R14DQ9NXH3 145 aa14.67□□□□□ -0.06
TOP3A-213ENST00000582230 BOLA1Q9Y3E2 137 aa14.67□□□□□ -0.06
TOP3A-213ENST00000582230 NPIPB6E9PJ23 425 aa14.66□□□□□ -0.06
TOP3A-213ENST00000582230 AMBPP02760 352 aa14.66□□□□□ -0.06
TOP3A-213ENST00000582230 CMTM2Q8TAZ6 248 aa14.66□□□□□ -0.06
TOP3A-213ENST00000582230 U3KQK5 164 aa14.66□□□□□ -0.06
TOP3A-213ENST00000582230 A0A1W2PRE2 83 aa14.65□□□□□ -0.06
TOP3A-213ENST00000582230 PRB4P10163 310 aaPredicted RBP14.65□□□□□ -0.06
TOP3A-213ENST00000582230 LINC00477Q96M19 166 aa14.65□□□□□ -0.06
TOP3A-213ENST00000582230 OVOL2Q9BRP0 275 aa14.65□□□□□ -0.06
TOP3A-213ENST00000582230 SLC35B3Q9H1N7 401 aa14.65□□□□□ -0.06
TOP3A-213ENST00000582230 TMPRSS5Q9H3S3 457 aa14.65□□□□□ -0.06
TOP3A-213ENST00000582230 RETNQ9HD89 108 aa14.65□□□□□ -0.06
TOP3A-213ENST00000582230 BOLA2-SMG1P6H3BVE0 249 aa14.64□□□□□ -0.07
TOP3A-213ENST00000582230 C9orf47Q6ZRZ4 202 aa14.64□□□□□ -0.07
TOP3A-213ENST00000582230 NKX6-2Q9C056 277 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-213ENST00000582230 XCL2Q9UBD3 114 aa14.64□□□□□ -0.07
TOP3A-213ENST00000582230 TRAV1-1A0A0B4J248 108 aa14.63□□□□□ -0.07
TOP3A-213ENST00000582230 RBAKDNA6NC62 111 aa14.63□□□□□ -0.07
TOP3A-213ENST00000582230 DIRC3C9JPN6 131 aa14.63□□□□□ -0.07
TOP3A-213ENST00000582230 TEX46H3BTG2 121 aa14.63□□□□□ -0.07
TOP3A-213ENST00000582230 SLC25A5P05141 298 aaKnown RBP14.63□□□□□ -0.07
TOP3A-213ENST00000582230 FXYD7P58549 80 aa14.63□□□□□ -0.07
TOP3A-213ENST00000582230 CSNK1G2-AS1Q8NCQ2 148 aa14.63□□□□□ -0.07
TOP3A-213ENST00000582230 ODF3Q96PU9 254 aa14.63□□□□□ -0.07
TOP3A-213ENST00000582230 IGKV2-40A0A087WW87 121 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-213ENST00000582230 IGKV2D-40P01614 121 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-213ENST00000582230 TSPOP30536 169 aa14.62□□□□□ -0.07
TOP3A-213ENST00000582230 SUMO1P63165 101 aaKnown RBP14.62□□□□□ -0.07
TOP3A-213ENST00000582230 TMEM78Q5T7P6 136 aa14.62□□□□□ -0.07
TOP3A-213ENST00000582230 C5orf17Q8NAS9 161 aa14.62□□□□□ -0.07
TOP3A-213ENST00000582230 ARL2-SNX15V9GYD0 113 aa14.62□□□□□ -0.07
TOP3A-213ENST00000582230 PRKDCP78527 4128 aaKnown RBP14.61□□□□□ -0.07
TOP3A-213ENST00000582230 SERTM2A0A1B0GWG4 89 aa14.61□□□□□ -0.07
TOP3A-213ENST00000582230 HBE1P02100 147 aa14.61□□□□□ -0.07
TOP3A-213ENST00000582230 CT45A10P0DMU9 189 aa14.61□□□□□ -0.07
TOP3A-213ENST00000582230 PPT1P50897 306 aa14.61□□□□□ -0.07
TOP3A-213ENST00000582230 SPINK13Q1W4C9 94 aa14.61□□□□□ -0.07
TOP3A-213ENST00000582230 ALKAL2Q6UX46 152 aa14.61□□□□□ -0.07
TOP3A-213ENST00000582230 AGPAT4-IT1Q9H0P7 198 aa14.61□□□□□ -0.07
TOP3A-213ENST00000582230 YTHDF2Q9Y5A9 579 aaKnown RBP14.61□□□□□ -0.07
TOP3A-213ENST00000582230 FAM74A7A6NL05 159 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 ZNF705EA8MWA4 302 aaPredicted RBP14.6□□□□□ -0.07
TOP3A-213ENST00000582230 GGTLC3B5MD39 225 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 M0R2Z0 102 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 CDKN1BP46527 198 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 UBE2G2P60604 165 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms