RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 EXOC3-AS1Q8N2X6 119 aa11.11□□□□□ -0.63
MKS1-210ENST00000581180 FAM213BQ8TBF2 198 aa11.11□□□□□ -0.63
MKS1-210ENST00000581180 RPUSD4Q96CM3 377 aaKnown RBP11.11□□□□□ -0.63
MKS1-210ENST00000581180 MRPL53Q96EL3 112 aaKnown RBP11.11□□□□□ -0.63
MKS1-210ENST00000581180 MAP1LC3BQ9GZQ8 125 aa11.11□□□□□ -0.63
MKS1-210ENST00000581180 HUWE1Q7Z6Z7 4374 aaKnown RBP11.11□□□□□ -0.63
MKS1-210ENST00000581180 PRAC2D3DTV9 90 aa11.1□□□□□ -0.63
MKS1-210ENST00000581180 M0R3E3 92 aa11.1□□□□□ -0.63
MKS1-210ENST00000581180 FGF8P55075 233 aaPredicted RBP11.1□□□□□ -0.63
MKS1-210ENST00000581180 ICAM4Q14773 271 aa11.1□□□□□ -0.63
MKS1-210ENST00000581180 CLUHP3Q96NS8 147 aa11.1□□□□□ -0.63
MKS1-210ENST00000581180 Q9H3A6 140 aa11.1□□□□□ -0.63
MKS1-210ENST00000581180 TMEM167BQ9NRX6 74 aa11.1□□□□□ -0.63
MKS1-210ENST00000581180 PRELID1Q9Y255 219 aa11.1□□□□□ -0.63
MKS1-210ENST00000581180 KIR2DL5BA0A0G2JN68 375 aa11.09□□□□□ -0.63
MKS1-210ENST00000581180 KIR2DL5BA0A0G2JPC4 375 aa11.09□□□□□ -0.63
MKS1-210ENST00000581180 PRB4P10163 310 aaPredicted RBP11.09□□□□□ -0.63
MKS1-210ENST00000581180 RANP62826 216 aaKnown RBP11.09□□□□□ -0.63
MKS1-210ENST00000581180 EBLN2Q6P2I7 272 aa11.09□□□□□ -0.63
MKS1-210ENST00000581180 KIR2DL5AQ8N109 375 aa11.09□□□□□ -0.63
MKS1-210ENST00000581180 OR8A1Q8NGG7 326 aa11.09□□□□□ -0.63
MKS1-210ENST00000581180 KIR2DL5BQ8NHK3 375 aa11.09□□□□□ -0.63
MKS1-210ENST00000581180 TMPRSS5Q9H3S3 457 aa11.09□□□□□ -0.63
MKS1-210ENST00000581180 AAMDCQ9H7C9 122 aa11.09□□□□□ -0.63
MKS1-210ENST00000581180 GIG44P09565 113 aaPredicted RBP11.08□□□□□ -0.64
MKS1-210ENST00000581180 ZNF705DP0CH99 300 aaPredicted RBP11.08□□□□□ -0.64
MKS1-210ENST00000581180 ZNF705BP0CI00 300 aaPredicted RBP11.08□□□□□ -0.64
MKS1-210ENST00000581180 FAM74A1Q5RGS3 127 aa11.08□□□□□ -0.64
MKS1-210ENST00000581180 ASCL2Q99929 193 aa11.08□□□□□ -0.64
MKS1-210ENST00000581180 OTORQ9NRC9 128 aa11.08□□□□□ -0.64
MKS1-210ENST00000581180 DUSP14O95147 198 aaKnown RBP11.07□□□□□ -0.64
MKS1-210ENST00000581180 H2AFB1P0C5Y9 115 aa11.07□□□□□ -0.64
MKS1-210ENST00000581180 CNN1P51911 297 aaKnown RBP11.07□□□□□ -0.64
MKS1-210ENST00000581180 APOC4P55056 127 aa11.07□□□□□ -0.64
MKS1-210ENST00000581180 AMTNQ6UX39 209 aa11.07□□□□□ -0.64
MKS1-210ENST00000581180 ALKAL2Q6UX46 152 aa11.07□□□□□ -0.64
MKS1-210ENST00000581180 SFT2D1Q8WV19 159 aa11.07□□□□□ -0.64
MKS1-210ENST00000581180 TM2D3Q9BRN9 247 aa11.07□□□□□ -0.64
MKS1-210ENST00000581180 CSTL1Q9H114 145 aa11.07□□□□□ -0.64
MKS1-210ENST00000581180 TRAV1-1A0A0B4J248 108 aa11.06□□□□□ -0.64
MKS1-210ENST00000581180 A0A1W2PRE2 83 aa11.06□□□□□ -0.64
MKS1-210ENST00000581180 PGPA6NDG6 321 aa11.06□□□□□ -0.64
MKS1-210ENST00000581180 UBE2CO00762 179 aa11.06□□□□□ -0.64
MKS1-210ENST00000581180 HIST1H1AQ02539 215 aaPredicted RBP11.06□□□□□ -0.64
MKS1-210ENST00000581180 MORN3Q6PF18 240 aaPredicted RBP11.06□□□□□ -0.64
MKS1-210ENST00000581180 IQCF2Q8IXL9 164 aa11.06□□□□□ -0.64
MKS1-210ENST00000581180 OR4B1Q8NGF8 309 aa11.06□□□□□ -0.64
MKS1-210ENST00000581180 NBEAL2Q6ZNJ1 2754 aa11.05□□□□□ -0.64
MKS1-210ENST00000581180 IGKV3-20P01619 116 aa11.05□□□□□ -0.64
MKS1-210ENST00000581180 ARL6IP6Q8N6S5 226 aa11.05□□□□□ -0.64
MKS1-210ENST00000581180 TENM3Q9P273 2699 aa11.05□□□□□ -0.64
MKS1-210ENST00000581180 COL7A1Q02388 2944 aa11.04□□□□□ -0.64
MKS1-210ENST00000581180 FAM74A7A6NL05 159 aa11.04□□□□□ -0.64
MKS1-210ENST00000581180 GGTLC3B5MD39 225 aa11.04□□□□□ -0.64
MKS1-210ENST00000581180 DIRC3C9JPN6 131 aa11.04□□□□□ -0.64
MKS1-210ENST00000581180 NPIPB6E9PJ23 425 aa11.04□□□□□ -0.64
MKS1-210ENST00000581180 Q6ZWC4 215 aa11.04□□□□□ -0.64
MKS1-210ENST00000581180 OR10J6PQ8NGY7 276 aa11.04□□□□□ -0.64
MKS1-210ENST00000581180 RXFP4Q8TDU9 374 aa11.04□□□□□ -0.64
MKS1-210ENST00000581180 SLC35B3Q9H1N7 401 aa11.04□□□□□ -0.64
MKS1-210ENST00000581180 YTHDF2Q9Y5A9 579 aaKnown RBP11.04□□□□□ -0.64
MKS1-210ENST00000581180 A0A1B0GV50 99 aa11.03□□□□□ -0.64
MKS1-210ENST00000581180 ZNF705EA8MWA4 302 aaPredicted RBP11.03□□□□□ -0.64
MKS1-210ENST00000581180 CA1P00915 261 aaPredicted RBP11.03□□□□□ -0.64
MKS1-210ENST00000581180 NHLRC4P0CG21 123 aaPredicted RBP11.03□□□□□ -0.64
MKS1-210ENST00000581180 CSN1S1P47710 185 aa11.03□□□□□ -0.64
MKS1-210ENST00000581180 UBE2G2P60604 165 aa11.03□□□□□ -0.64
MKS1-210ENST00000581180 NUTF2P61970 127 aaKnown RBP11.03□□□□□ -0.64
MKS1-210ENST00000581180 SUMO1P63165 101 aaKnown RBP11.03□□□□□ -0.64
MKS1-210ENST00000581180 CCL20P78556 96 aa11.03□□□□□ -0.64
MKS1-210ENST00000581180 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
MKS1-210ENST00000581180 ARL2-SNX15V9GYD0 113 aa11.03□□□□□ -0.64
MKS1-210ENST00000581180 IGKV2-40A0A087WW87 121 aaPredicted RBP11.02□□□□□ -0.65
MKS1-210ENST00000581180 RBAKDNA6NC62 111 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 IGKV2D-40P01614 121 aaPredicted RBP11.02□□□□□ -0.65
MKS1-210ENST00000581180 HBE1P02100 147 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 CT45A10P0DMU9 189 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 FXYD7P58549 80 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 ERCC8Q13216 396 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 TEX261Q6UWH6 196 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 C5orf17Q8NAS9 161 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 CSNK1G2-AS1Q8NCQ2 148 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 CMTM2Q8TAZ6 248 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 VGLL1Q99990 258 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 SPATA25Q9BR10 227 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 NKX6-2Q9C056 277 aaPredicted RBP11.02□□□□□ -0.65
MKS1-210ENST00000581180 AGPAT4-IT1Q9H0P7 198 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 RETNQ9HD89 108 aa11.02□□□□□ -0.65
MKS1-210ENST00000581180 SLC25A5P05141 298 aaKnown RBP11.01□□□□□ -0.65
MKS1-210ENST00000581180 GNG5P63218 68 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 DEFB135Q30KP9 77 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 CCDC28AQ8IWP9 274 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 RNF183Q96D59 192 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 FAM19A4Q96LR4 140 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 ODF3Q96PU9 254 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 OVOL2Q9BRP0 275 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 XCL2Q9UBD3 114 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 TP53TG1Q9Y2A0 90 aa11.01□□□□□ -0.65
MKS1-210ENST00000581180 TGP01266 2768 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms