RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 ZNF680Q8NEM1 530 aa6.75□□□□□ -1.33
RFFL-208ENST00000581039 ZNF431Q8TF32 576 aaPredicted RBP6.75□□□□□ -1.33
RFFL-208ENST00000581039 PSENENQ9NZ42 101 aa6.75□□□□□ -1.33
RFFL-208ENST00000581039 MSRB1Q9NZV6 116 aa6.75□□□□□ -1.33
RFFL-208ENST00000581039 LY96Q9Y6Y9 160 aa6.75□□□□□ -1.33
RFFL-208ENST00000581039 H3BTX0 84 aa6.74□□□□□ -1.33
RFFL-208ENST00000581039 K7EP13 123 aa6.74□□□□□ -1.33
RFFL-208ENST00000581039 CT45A10P0DMU9 189 aa6.74□□□□□ -1.33
RFFL-208ENST00000581039 RRAS2P62070 204 aaPredicted RBP6.74□□□□□ -1.33
RFFL-208ENST00000581039 HAMPP81172 84 aa6.74□□□□□ -1.33
RFFL-208ENST00000581039 SLAQ13239 276 aa6.74□□□□□ -1.33
RFFL-208ENST00000581039 MRPL23Q16540 153 aaKnown RBP6.74□□□□□ -1.33
RFFL-208ENST00000581039 ODF3Q96PU9 254 aa6.74□□□□□ -1.33
RFFL-208ENST00000581039 NPVFQ9HCQ7 196 aa6.74□□□□□ -1.33
RFFL-208ENST00000581039 RSL24D1Q9UHA3 163 aaKnown RBP6.74□□□□□ -1.33
RFFL-208ENST00000581039 PXMP4Q9Y6I8 212 aa6.74□□□□□ -1.33
RFFL-208ENST00000581039 IGLV5-52A0A0A0MRZ9 124 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 LINC00854A0A1B0GVQ3 168 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 NPIPB6E9PJ23 425 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 K7EPK0 472 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 SLC17A3O00476 420 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 GOSR2O14653 212 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 SFT2D2O95562 160 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 SLC25A5P05141 298 aaKnown RBP6.73□□□□□ -1.33
RFFL-208ENST00000581039 EVI2AP22794 236 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 FAUP35544 74 aaKnown RBP6.73□□□□□ -1.33
RFFL-208ENST00000581039 ID3Q02535 119 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 C4orf46Q504U0 113 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 TEPPQ6URK8 271 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 NEGR1Q7Z3B1 354 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 ST6GAL2Q96JF0 529 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 LINC00467Q9BRT7 94 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 TMEM70Q9BUB7 260 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 CCDC59Q9P031 241 aaKnown RBP6.73□□□□□ -1.33
RFFL-208ENST00000581039 MGAT4CQ9UBM8 478 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 PRO0255Q9UI72 69 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 HHLA3Q9XRX5 114 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 VPS13BQ7Z7G8 4022 aa6.73□□□□□ -1.33
RFFL-208ENST00000581039 C7orf71A4D174 169 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 COX7A2P2O60397 106 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 SPINK4O60575 86 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 PRAF2O60831 178 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 POLR2GP62487 172 aaKnown RBP eCLIP6.72□□□□□ -1.33
RFFL-208ENST00000581039 SLC38A11Q08AI6 406 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 ANXA2RQ3ZCQ2 193 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 ZNF546Q86UE3 836 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 EIF4E3Q8N5X7 224 aaKnown RBP6.72□□□□□ -1.33
RFFL-208ENST00000581039 OR10P1Q8NGE3 313 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 SAT2Q96F10 170 aaPredicted RBP6.72□□□□□ -1.33
RFFL-208ENST00000581039 SMIM8Q96KF7 97 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 C8orf49Q96NF6 230 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 KLF12Q9Y4X4 402 aa6.72□□□□□ -1.33
RFFL-208ENST00000581039 FABP12A6NFH5 140 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 FNDC10F2Z333 226 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 H3BQ15 152 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 PSCAO43653 123 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 SSSCA1O60232 199 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 CCNKO75909 580 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 METTL15P1P0C7V9 234 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 IGLC2P0DOY2 106 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 RNASE4P34096 147 aaKnown RBP6.71□□□□□ -1.34
RFFL-208ENST00000581039 CRYBA4P53673 196 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 TCL1AP56279 114 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 PPP1R1AQ13522 171 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 SPCS2Q15005 226 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 GUK1Q16774 197 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 C10orf113Q5VZT2 155 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
RFFL-208ENST00000581039 TMEM37Q8WXS4 190 aa6.71□□□□□ -1.34
RFFL-208ENST00000581039 SLC25A21Q9BQT8 299 aaPredicted RBP6.71□□□□□ -1.34
RFFL-208ENST00000581039 KRTAP29-1A8MX34 341 aaPredicted RBP6.7□□□□□ -1.34
RFFL-208ENST00000581039 E5RGE8 158 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 AGPAT2O15120 278 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 MPDU1O75352 247 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 PLA2G1BP04054 148 aaKnown RBP6.7□□□□□ -1.34
RFFL-208ENST00000581039 CRYGDP07320 174 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 SRIP30626 198 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 AP3S2P59780 193 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 CD300CQ08708 224 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 FHL2Q14192 279 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 OPCMLQ14982 345 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 SERTAD4-AS1Q5TG53 156 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 TMEM14EPQ6UXP3 125 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 WFDC10BQ8IUB3 73 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 TOMM5Q8N4H5 51 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 C10orf126Q8N4M7 172 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 MCFD2Q8NI22 146 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 MRPL32Q9BYC8 188 aaKnown RBP6.7□□□□□ -1.34
RFFL-208ENST00000581039 DNAJC4Q9NNZ3 241 aa6.7□□□□□ -1.34
RFFL-208ENST00000581039 MRPL16Q9NX20 251 aaKnown RBP6.7□□□□□ -1.34
RFFL-208ENST00000581039 TRGV4A0A0C4DH28 118 aa6.69□□□□□ -1.34
RFFL-208ENST00000581039 KLLNB2CW77 178 aa6.69□□□□□ -1.34
RFFL-208ENST00000581039 RGS13O14921 159 aa6.69□□□□□ -1.34
RFFL-208ENST00000581039 GPX1P07203 203 aa6.69□□□□□ -1.34
RFFL-208ENST00000581039 ERCC8Q13216 396 aa6.69□□□□□ -1.34
RFFL-208ENST00000581039 BTN1A1Q13410 526 aa6.69□□□□□ -1.34
RFFL-208ENST00000581039 IBA57Q5T440 356 aaKnown RBP6.69□□□□□ -1.34
RFFL-208ENST00000581039 MORN5Q5VZ52 161 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms