RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 RABL2BQ9UNT1 228 aa12.91□□□□□ -0.34
NDEL1-209ENST00000580738 KLF12Q9Y4X4 402 aa12.91□□□□□ -0.34
NDEL1-209ENST00000580738 IGLV5-52A0A0A0MRZ9 124 aa12.9□□□□□ -0.34
NDEL1-209ENST00000580738 PIGBOS1A0A0B4J2F0 54 aa12.9□□□□□ -0.34
NDEL1-209ENST00000580738 KRTAP29-1A8MX34 341 aaPredicted RBP12.9□□□□□ -0.34
NDEL1-209ENST00000580738 IGHV3-53P01767 116 aa12.9□□□□□ -0.34
NDEL1-209ENST00000580738 LEPP41159 167 aa12.9□□□□□ -0.34
NDEL1-209ENST00000580738 LINC00467Q9BRT7 94 aa12.9□□□□□ -0.34
NDEL1-209ENST00000580738 FAM30AQ9NZY2 134 aa12.9□□□□□ -0.34
NDEL1-209ENST00000580738 CCNKO75909 580 aa12.89□□□□□ -0.35
NDEL1-209ENST00000580738 VAMP1P23763 118 aa12.89□□□□□ -0.35
NDEL1-209ENST00000580738 RRAS2P62070 204 aaPredicted RBP12.89□□□□□ -0.35
NDEL1-209ENST00000580738 TMEM128Q5BJH2 165 aa12.89□□□□□ -0.35
NDEL1-209ENST00000580738 LINC00305Q7Z4B0 112 aa12.89□□□□□ -0.35
NDEL1-209ENST00000580738 S100A7AQ86SG5 101 aa12.89□□□□□ -0.35
NDEL1-209ENST00000580738 WFDC10BQ8IUB3 73 aa12.89□□□□□ -0.35
NDEL1-209ENST00000580738 DIRAS2Q96HU8 199 aa12.89□□□□□ -0.35
NDEL1-209ENST00000580738 NPIPB6E9PJ23 425 aa12.88□□□□□ -0.35
NDEL1-209ENST00000580738 SPINK4O60575 86 aa12.88□□□□□ -0.35
NDEL1-209ENST00000580738 PRAF2O60831 178 aa12.88□□□□□ -0.35
NDEL1-209ENST00000580738 HOXB5P09067 269 aa12.88□□□□□ -0.35
NDEL1-209ENST00000580738 MORN5Q5VZ52 161 aa12.88□□□□□ -0.35
NDEL1-209ENST00000580738 ZNF680Q8NEM1 530 aa12.88□□□□□ -0.35
NDEL1-209ENST00000580738 ST6GAL2Q96JF0 529 aa12.88□□□□□ -0.35
NDEL1-209ENST00000580738 ODF3Q96PU9 254 aa12.88□□□□□ -0.35
NDEL1-209ENST00000580738 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
NDEL1-209ENST00000580738 H3BQ15 152 aa12.87□□□□□ -0.35
NDEL1-209ENST00000580738 CRYBA4P53673 196 aa12.87□□□□□ -0.35
NDEL1-209ENST00000580738 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
NDEL1-209ENST00000580738 MRPL23Q16540 153 aaKnown RBP12.87□□□□□ -0.35
NDEL1-209ENST00000580738 NEGR1Q7Z3B1 354 aa12.87□□□□□ -0.35
NDEL1-209ENST00000580738 BPIFA4PQ86YQ2 179 aa12.87□□□□□ -0.35
NDEL1-209ENST00000580738 SAT2Q96F10 170 aaPredicted RBP12.87□□□□□ -0.35
NDEL1-209ENST00000580738 C8orf49Q96NF6 230 aa12.87□□□□□ -0.35
NDEL1-209ENST00000580738 HHLA3Q9XRX5 114 aa12.87□□□□□ -0.35
NDEL1-209ENST00000580738 K7EPK0 472 aa12.86□□□□□ -0.35
NDEL1-209ENST00000580738 POLR2GP62487 172 aaKnown RBP eCLIP12.86□□□□□ -0.35
NDEL1-209ENST00000580738 PSENENQ9NZ42 101 aa12.86□□□□□ -0.35
NDEL1-209ENST00000580738 RNF24Q9Y225 148 aa12.86□□□□□ -0.35
NDEL1-209ENST00000580738 C7orf71A4D174 169 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 LRCOL1A6NCL2 159 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 SLC25A5P05141 298 aaKnown RBP12.85□□□□□ -0.35
NDEL1-209ENST00000580738 IGLC2P0DOY2 106 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 EVI2AP22794 236 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 TCL1AP56279 114 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 ID3Q02535 119 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 CD300CQ08708 224 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 FHL2Q14192 279 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 ANXA2RQ3ZCQ2 193 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 NPVFQ9HCQ7 196 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 MRPL16Q9NX20 251 aaKnown RBP12.85□□□□□ -0.35
NDEL1-209ENST00000580738 PXMP4Q9Y6I8 212 aa12.85□□□□□ -0.35
NDEL1-209ENST00000580738 K7EP13 123 aa12.84□□□□□ -0.35
NDEL1-209ENST00000580738 ERCC8Q13216 396 aa12.84□□□□□ -0.35
NDEL1-209ENST00000580738 BTN1A1Q13410 526 aa12.84□□□□□ -0.35
NDEL1-209ENST00000580738 PPP1R1AQ13522 171 aa12.84□□□□□ -0.35
NDEL1-209ENST00000580738 OPCMLQ14982 345 aa12.84□□□□□ -0.35
NDEL1-209ENST00000580738 SERTAD4-AS1Q5TG53 156 aa12.84□□□□□ -0.35
NDEL1-209ENST00000580738 EIF4E3Q8N5X7 224 aaKnown RBP12.84□□□□□ -0.35
NDEL1-209ENST00000580738 TMEM37Q8WXS4 190 aa12.84□□□□□ -0.35
NDEL1-209ENST00000580738 TP53TG3Q9ULZ0 132 aa12.84□□□□□ -0.35
NDEL1-209ENST00000580738 GOSR2O14653 212 aa12.83□□□□□ -0.36
NDEL1-209ENST00000580738 SFT2D2O95562 160 aa12.83□□□□□ -0.36
NDEL1-209ENST00000580738 METTL15P1P0C7V9 234 aa12.83□□□□□ -0.36
NDEL1-209ENST00000580738 SPCS2Q15005 226 aa12.83□□□□□ -0.36
NDEL1-209ENST00000580738 C4orf46Q504U0 113 aa12.83□□□□□ -0.36
NDEL1-209ENST00000580738 PXDC1Q5TGL8 231 aa12.83□□□□□ -0.36
NDEL1-209ENST00000580738 NTN5Q8WTR8 489 aaPredicted RBP12.83□□□□□ -0.36
NDEL1-209ENST00000580738 CCDC59Q9P031 241 aaKnown RBP12.83□□□□□ -0.36
NDEL1-209ENST00000580738 RABL2AQ9UBK7 228 aaPredicted RBP12.83□□□□□ -0.36
NDEL1-209ENST00000580738 DNAH8Q96JB1 4490 aa12.83□□□□□ -0.36
NDEL1-209ENST00000580738 KLLNB2CW77 178 aa12.82□□□□□ -0.36
NDEL1-209ENST00000580738 E5RGE8 158 aa12.82□□□□□ -0.36
NDEL1-209ENST00000580738 AGPAT2O15120 278 aa12.82□□□□□ -0.36
NDEL1-209ENST00000580738 SSSCA1O60232 199 aa12.82□□□□□ -0.36
NDEL1-209ENST00000580738 COX7A2P2O60397 106 aa12.82□□□□□ -0.36
NDEL1-209ENST00000580738 PLA2G1BP04054 148 aaKnown RBP12.82□□□□□ -0.36
NDEL1-209ENST00000580738 CRYGDP07320 174 aa12.82□□□□□ -0.36
NDEL1-209ENST00000580738 RNASE4P34096 147 aaKnown RBP12.82□□□□□ -0.36
NDEL1-209ENST00000580738 SLAQ13239 276 aa12.82□□□□□ -0.36
NDEL1-209ENST00000580738 VGLL1Q99990 258 aa12.82□□□□□ -0.36
NDEL1-209ENST00000580738 LRP1Q07954 4544 aaKnown RBP12.82□□□□□ -0.36
NDEL1-209ENST00000580738 K7EQD1 137 aa12.81□□□□□ -0.36
NDEL1-209ENST00000580738 TMEM14EPQ6UXP3 125 aa12.81□□□□□ -0.36
NDEL1-209ENST00000580738 Q6ZQT7 251 aa12.81□□□□□ -0.36
NDEL1-209ENST00000580738 ZNF546Q86UE3 836 aa12.81□□□□□ -0.36
NDEL1-209ENST00000580738 SMIM8Q96KF7 97 aa12.81□□□□□ -0.36
NDEL1-209ENST00000580738 FAM19A4Q96LR4 140 aa12.81□□□□□ -0.36
NDEL1-209ENST00000580738 MRPL32Q9BYC8 188 aaKnown RBP12.81□□□□□ -0.36
NDEL1-209ENST00000580738 RSL24D1Q9UHA3 163 aaKnown RBP12.81□□□□□ -0.36
NDEL1-209ENST00000580738 TRAV5A0A0B4J249 113 aa12.8□□□□□ -0.36
NDEL1-209ENST00000580738 FNDC10F2Z333 226 aa12.8□□□□□ -0.36
NDEL1-209ENST00000580738 M0R3E3 92 aa12.8□□□□□ -0.36
NDEL1-209ENST00000580738 PSCAO43653 123 aa12.8□□□□□ -0.36
NDEL1-209ENST00000580738 SRIP30626 198 aa12.8□□□□□ -0.36
NDEL1-209ENST00000580738 IBA57Q5T440 356 aaKnown RBP12.8□□□□□ -0.36
NDEL1-209ENST00000580738 C10orf113Q5VZT2 155 aa12.8□□□□□ -0.36
NDEL1-209ENST00000580738 Q8N814 137 aa12.8□□□□□ -0.36
NDEL1-209ENST00000580738 SYT8Q8NBV8 401 aa12.8□□□□□ -0.36
NDEL1-209ENST00000580738 OR10P1Q8NGE3 313 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms