RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 IGLV2-8P01709 118 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 HIGD1AQ9Y241 93 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 TRAV9-1A0A075B6T8 112 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 K7EIM0 57 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 NDUFB8O95169 186 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 SLC25A5P05141 298 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IGLC1P0CG04 106 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 ARL3P36405 182 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 Q0VG73 95 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 RPEL1Q2QD12 228 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 PVRIGQ6DKI7 326 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 LCNL1Q6ZST4 164 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 ZNF329Q86UD4 541 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 SIGLECL1Q8N7X8 197 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 ZFP30Q9Y2G7 519 aa9.89□□□□□ -0.83
CDK5RAP3-217ENST00000580287 PGPA6NDG6 321 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 TCF21O43680 179 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 NBEAP1P0C6P0 100 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 KRTDAPP60985 99 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 Q6YL49 198 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 STXBP6Q8NFX7 210 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 LY96Q9Y6Y9 160 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 PEX7O00628 323 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IBA57Q5T440 356 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 TTC9CQ8N5M4 171 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 OR4B1Q8NGF8 309 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 RNASE8Q8TDE3 154 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 ASCL2Q99929 193 aa9.88□□□□□ -0.83
CDK5RAP3-217ENST00000580287 DIRC3C9JPN6 131 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 ISLRO14498 428 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 CD5LO43866 347 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 CTRLP40313 264 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 UBE2G1P62253 170 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 GNB4Q9HAV0 340 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IGLV11-55A0A075B6I3 123 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 NPIPB5A8MRT5 1133 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 GPX1P07203 203 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 ZNF586Q9NXT0 402 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 CLEC5AQ9NY25 188 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 NAT8BQ9UHF3 227 aa9.87□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IGHV3-35A0A0C4DH35 117 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IGKV1-17P01599 117 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 SPATA45Q537H7 98 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 C9orf139Q6ZV77 190 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IGF2BP2-AS1Q96M15 143 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 RCHY1Q96PM5 261 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 C1orf43Q9BWL3 253 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 CDC42EP3Q9UKI2 254 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 GNG7O60262 68 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 STPG4Q8N801 248 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 SRSF8Q9BRL6 282 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 SLC25A39Q9BZJ4 359 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 LY6G6DO95868 133 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IL4P05112 153 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 CLEC3BP05452 202 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 Q56UQ5 140 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 SHISA2Q6UWI4 295 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 NRN1Q9NPD7 142 aa9.86□□□□□ -0.83
CDK5RAP3-217ENST00000580287 TRAV41A0A0B4J266 112 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 GP9P14770 177 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 KLK15Q9H2R5 256 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 VPREB3Q9UKI3 123 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 EPDR1Q9UM22 224 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 NIPBLQ6KC79 2804 aaeCLIP9.85□□□□□ -0.833e-6■■■■□ 20.4
CDK5RAP3-217ENST00000580287 IGHV3OR16-8A0A075B7F1 116 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IGHG2P01859 326 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 RHOGP84095 191 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 C15orf32Q32M92 178 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 GNB1LQ9BYB4 327 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 Q9H3A6 140 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 OSTCQ9NRP0 149 aa9.85□□□□□ -0.83
CDK5RAP3-217ENST00000580287 TRBV9A0A0B4J1U6 114 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 OR2T8A6NH00 312 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 CYSRT1A8MQ03 144 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 F8W735 103 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IGLC2P0DOY2 106 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 IGLC3P0DOY3 106 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 PMCHP20382 165 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 AMTP48728 403 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 HIST2H2BDQ6DRA6 164 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 SSBP4Q9BWG4 385 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 UQCR10Q9UDW1 63 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 PLP1P60201 277 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 FAM19A2Q8N3H0 131 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 FAM110DQ8TAY7 271 aaPredicted RBP9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 KCNS1Q96KK3 526 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 ESM1Q9NQ30 184 aa9.84□□□□□ -0.83
CDK5RAP3-217ENST00000580287 TRAV8-1A0A0A6YYK1 113 aa9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 A0A1W2PS18 150 aa9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 FCGR2BP31994 310 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 Q6ZN92 141 aa9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 EXOC3-AS1Q8N2X6 119 aa9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 ZNF253O75346 499 aa9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 SRIP30626 198 aa9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 LINC00322Q6ZN03 302 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 TMEM136Q6ZRR5 245 aa9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 C21orf62Q9NYP8 219 aa9.83□□□□□ -0.84
CDK5RAP3-217ENST00000580287 LAMTOR2Q9Y2Q5 125 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms