RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 MZT2BQ6NZ67 158 aa9.66□□□□□ -0.86
GGA3-208ENST00000579743 NUDT15Q9NV35 164 aa9.66□□□□□ -0.86
GGA3-208ENST00000579743 hCG_2014768A0A024R1R8 64 aa9.65□□□□□ -0.86
GGA3-208ENST00000579743 ZNF253O75346 499 aa9.65□□□□□ -0.86
GGA3-208ENST00000579743 SNRPCP09234 159 aaKnown RBP9.65□□□□□ -0.86
GGA3-208ENST00000579743 H2AFB2P0C5Z0 115 aa9.65□□□□□ -0.86
GGA3-208ENST00000579743 RPL29P47914 159 aaKnown RBP9.65□□□□□ -0.86
GGA3-208ENST00000579743 SULT1A1P50225 295 aa9.65□□□□□ -0.86
GGA3-208ENST00000579743 OR5I1Q13606 314 aa9.65□□□□□ -0.86
GGA3-208ENST00000579743 FCN2Q15485 313 aa9.65□□□□□ -0.86
GGA3-208ENST00000579743 ATP6V1FQ16864 119 aa9.65□□□□□ -0.86
GGA3-208ENST00000579743 RNASE8Q8TDE3 154 aaKnown RBP9.65□□□□□ -0.86
GGA3-208ENST00000579743 TMEM37Q8WXS4 190 aa9.65□□□□□ -0.86
GGA3-208ENST00000579743 WDR83OSQ9Y284 106 aa9.65□□□□□ -0.86
GGA3-208ENST00000579743 FAM240BA0A1B0GVZ2 78 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 PLAC8L1A1L4L8 177 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 FAM24AA6NFZ4 105 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 PLA2G10O15496 165 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 MPDU1O75352 247 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 IGLC2P0DOY2 106 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 DEFA1P59665 94 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 DEFA3P59666 94 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 MIC13Q5XKP0 118 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 GNPNAT1Q96EK6 184 aaPredicted RBP9.64□□□□□ -0.87
GGA3-208ENST00000579743 ODF3Q96PU9 254 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 PYGO2Q9BRQ0 406 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 AAMDCQ9H7C9 122 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 LYRM2Q9NU23 88 aaPredicted RBP9.64□□□□□ -0.87
GGA3-208ENST00000579743 SLC39A9Q9NUM3 307 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 PRELID1Q9Y255 219 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 TIMM9Q9Y5J7 89 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 FRAS1Q86XX4 4008 aa9.64□□□□□ -0.87
GGA3-208ENST00000579743 NBDYA0A0U1RRE5 68 aa9.63□□□□□ -0.87
GGA3-208ENST00000579743 UBE2L5PA0A1B0GUS4 154 aa9.63□□□□□ -0.87
GGA3-208ENST00000579743 H3BTX0 84 aa9.63□□□□□ -0.87
GGA3-208ENST00000579743 M6PRP20645 277 aa9.63□□□□□ -0.87
GGA3-208ENST00000579743 ASAH1Q13510 395 aa9.63□□□□□ -0.87
GGA3-208ENST00000579743 GFI1BQ5VTD9 330 aa9.63□□□□□ -0.87
GGA3-208ENST00000579743 MRPL53Q96EL3 112 aaKnown RBP9.63□□□□□ -0.87
GGA3-208ENST00000579743 SAT2Q96F10 170 aaPredicted RBP9.63□□□□□ -0.87
GGA3-208ENST00000579743 ZNF503Q96F45 646 aa9.63□□□□□ -0.87
GGA3-208ENST00000579743 SEC22CQ9BRL7 303 aa9.63□□□□□ -0.87
GGA3-208ENST00000579743 GPN1Q9HCN4 374 aaPredicted RBP9.63□□□□□ -0.87
GGA3-208ENST00000579743 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 H3BQ15 152 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 J3KRW8 73 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 SLC17A3O00476 420 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 SLC25A5P05141 298 aaKnown RBP9.62□□□□□ -0.87
GGA3-208ENST00000579743 PDE6HQ13956 83 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 VWC2Q2TAL6 325 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 TTC32Q5I0X7 151 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 C6orf223Q8N319 242 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 CHAC2Q8WUX2 184 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 RNF141Q8WVD5 230 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 LINC00477Q96M19 166 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 KCNIP2Q9NS61 270 aa9.62□□□□□ -0.87
GGA3-208ENST00000579743 PRAC2D3DTV9 90 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 NPIPB6E9PJ23 425 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 HIST1H1EP10412 219 aaKnown RBP9.61□□□□□ -0.87
GGA3-208ENST00000579743 FGF7P21781 194 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 MORN5Q5VZ52 161 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 SSX7Q7RTT5 188 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 TMEM252Q8N6L7 170 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 ZNF680Q8NEM1 530 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 RXFP4Q8TDU9 374 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 SLC25A31Q9H0C2 315 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 TMEM14CQ9P0S9 112 aa9.61□□□□□ -0.87
GGA3-208ENST00000579743 TRBV19A0A075B6N1 114 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 TRGV2A0A075B6R0 118 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 TRAV26-1A0A087WT03 109 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 TRAV5A0A0B4J249 113 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 GAGE12BA1L429 117 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 H3BNG1 76 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 GAGE7O76087 117 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 GAGE12FP0CL80 117 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 GAGE12GP0CL81 117 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 GAGE12IP0CL82 117 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 CT45A10P0DMU9 189 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 PRB4P10163 310 aaPredicted RBP9.6□□□□□ -0.87
GGA3-208ENST00000579743 RAB32Q13637 225 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 KRTAP17-1Q9BYP8 105 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 ZNF586Q9NXT0 402 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
GGA3-208ENST00000579743 IGSF23A1L1A6 192 aa9.59□□□□□ -0.87
GGA3-208ENST00000579743 C7orf71A4D174 169 aa9.59□□□□□ -0.87
GGA3-208ENST00000579743 CYCSP99999 105 aaKnown RBP9.59□□□□□ -0.87
GGA3-208ENST00000579743 DAZ2Q13117 558 aaKnown RBP9.59□□□□□ -0.87
GGA3-208ENST00000579743 TMEM78Q5T7P6 136 aa9.59□□□□□ -0.87
GGA3-208ENST00000579743 PARD6GQ9BYG4 376 aaPredicted RBP9.59□□□□□ -0.87
GGA3-208ENST00000579743 Q9H8V8 135 aa9.59□□□□□ -0.87
GGA3-208ENST00000579743 LINC00588Q9Y4M8 146 aa9.59□□□□□ -0.87
GGA3-208ENST00000579743 E5RGE8 158 aa9.58□□□□□ -0.88
GGA3-208ENST00000579743 C17orf112F2Z3M2 114 aa9.58□□□□□ -0.88
GGA3-208ENST00000579743 GPX1P07203 203 aa9.58□□□□□ -0.88
GGA3-208ENST00000579743 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
GGA3-208ENST00000579743 ENKURQ8TC29 256 aa9.58□□□□□ -0.88
GGA3-208ENST00000579743 BLNKQ8WV28 456 aa9.58□□□□□ -0.88
GGA3-208ENST00000579743 C11orf1Q9H5F2 150 aa9.58□□□□□ -0.88
GGA3-208ENST00000579743 A0A0J9YY99 117 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms