RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 PEF1Q9UBV8 284 aaKnown RBP7.77□□□□□ -1.17
SS18-210ENST00000578700 TRBV19A0A075B6N1 114 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 IGHV3-35A0A0C4DH35 117 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 A0A1W2PS18 150 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 ZNF785A8K8V0 405 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 PPP5D1E7EU14 171 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 H7BYZ3 331 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 PEX7O00628 323 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 PSMB8P28062 276 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 BMI1P35226 326 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 MYCNOSP40205 109 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 CSN1S1P47710 185 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 TAS2R60P59551 318 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 RPL23P62829 140 aaKnown RBP7.76□□□□□ -1.17
SS18-210ENST00000578700 FAM106AQ4KMX7 169 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 CASC10Q5T4H9 136 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 ZNF343Q6P1L6 599 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 MUC7Q8TAX7 377 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 ELOVL1Q9BW60 279 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 Q9H3A6 140 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 TMEM242Q9NWH2 141 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 EPDR1Q9UM22 224 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 LY96Q9Y6Y9 160 aa7.76□□□□□ -1.17
SS18-210ENST00000578700 IGLC2P0DOY2 106 aa7.75□□□□□ -1.17
SS18-210ENST00000578700 FMC1Q96HJ9 113 aa7.75□□□□□ -1.17
SS18-210ENST00000578700 ATG101Q9BSB4 218 aa7.75□□□□□ -1.17
SS18-210ENST00000578700 DERL1Q9BUN8 251 aa7.75□□□□□ -1.17
SS18-210ENST00000578700 KLK15Q9H2R5 256 aa7.75□□□□□ -1.17
SS18-210ENST00000578700 ZFAND3Q9H8U3 227 aa7.75□□□□□ -1.17
SS18-210ENST00000578700 BIN3Q9NQY0 253 aa7.75□□□□□ -1.17
SS18-210ENST00000578700 ZNF586Q9NXT0 402 aa7.75□□□□□ -1.17
SS18-210ENST00000578700 RPH3ALQ9UNE2 315 aa7.75□□□□□ -1.17
SS18-210ENST00000578700 STARD9Q9P2P6 4700 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 SERTM2A0A1B0GWG4 89 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 ZNF320A2RRD8 509 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 H3BTX0 84 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 SNRPCP09234 159 aaKnown RBP7.74□□□□□ -1.17
SS18-210ENST00000578700 CENPWQ5EE01 88 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 KCNIP4Q6PIL6 250 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 LINC01551Q86U37 167 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 C2CD4CQ8TF44 421 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 ZNF414Q96IQ9 312 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 BTF3L4Q96K17 158 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 UBE2E2Q96LR5 201 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 TMA7Q9Y2S6 64 aaKnown RBP7.74□□□□□ -1.17
SS18-210ENST00000578700 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 SORL1Q92673 2214 aa7.74□□□□□ -1.17
SS18-210ENST00000578700 IGHV3OR16-8A0A075B7F1 116 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 FBLL1A6NHQ2 334 aaKnown RBP7.73□□□□□ -1.17
SS18-210ENST00000578700 CCL24O00175 119 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 BUB3O43684 328 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 ZNF253O75346 499 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 TCRAP04437 139 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 LGALS1P09382 135 aaKnown RBP7.73□□□□□ -1.17
SS18-210ENST00000578700 MGST1P10620 155 aaKnown RBP7.73□□□□□ -1.17
SS18-210ENST00000578700 RPEL1Q2QD12 228 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 DEFB136Q30KP8 78 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 RNF212Q495C1 297 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 ZFAND6Q6FIF0 208 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 SMIM12Q96EX1 92 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 RAX2Q96IS3 184 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 SLC50A1Q9BRV3 221 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 CLEC5AQ9NY25 188 aa7.73□□□□□ -1.17
SS18-210ENST00000578700 HYDINQ4G0P3 5121 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 RPLP1P05386 114 aaKnown RBP7.72□□□□□ -1.17
SS18-210ENST00000578700 ERVFC1-1P60608 527 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 RPL19P84098 196 aaKnown RBP7.72□□□□□ -1.17
SS18-210ENST00000578700 TMEM183BQ1AE95 376 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 LCNL1Q6ZST4 164 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 BAGE2Q86Y30 109 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 EXOC3-AS1Q8N2X6 119 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 ARL6IP6Q8N6S5 226 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 OR10G8Q8NGN5 311 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 OCC1Q8TAD7 63 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 ISOC2Q96AB3 205 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 SFRP2Q96HF1 295 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 RCHY1Q96PM5 261 aa7.72□□□□□ -1.17
SS18-210ENST00000578700 DAZ1Q9NQZ3 744 aaKnown RBP7.72□□□□□ -1.17
SS18-210ENST00000578700 A0A087X0K7 114 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 K7EMT4 169 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 MRPS12O15235 138 aaKnown RBP7.71□□□□□ -1.18
SS18-210ENST00000578700 ZNF207O43670 478 aaKnown RBP7.71□□□□□ -1.18
SS18-210ENST00000578700 TRBV12-3P01733 135 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 GNG5P63218 68 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 SAMD13Q5VXD3 122 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 SIGLEC15Q6ZMC9 328 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 GOLT1AQ6ZVE7 132 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 GPHB5Q86YW7 130 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 FAM24BQ8N5W8 94 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 RNF152Q8N8N0 203 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 KLF12Q9Y4X4 402 aa7.71□□□□□ -1.18
SS18-210ENST00000578700 TRBV20OR9-2A0A075B6H5 130 aa7.7□□□□□ -1.18
SS18-210ENST00000578700 IGHV3-66A0A0C4DH42 116 aa7.7□□□□□ -1.18
SS18-210ENST00000578700 LCE6AA0A183 80 aa7.7□□□□□ -1.18
SS18-210ENST00000578700 PGPEP1LA6NFU8 196 aa7.7□□□□□ -1.18
SS18-210ENST00000578700 ISLRO14498 428 aa7.7□□□□□ -1.18
SS18-210ENST00000578700 RPL11P62913 178 aaKnown RBP7.7□□□□□ -1.18
SS18-210ENST00000578700 C16orf54Q6UWD8 224 aa7.7□□□□□ -1.18
SS18-210ENST00000578700 SBSPONQ8IVN8 264 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms