RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 RPUSD4Q96CM3 377 aaKnown RBP9.24□□□□□ -0.93
CCDC57-211ENST00000578187 X6R8D5 127 aa9.24□□□□□ -0.93
CCDC57-211ENST00000578187 HYDINQ4G0P3 5121 aa9.23□□□□□ -0.93
CCDC57-211ENST00000578187 EPPK1P58107 5090 aaKnown RBP9.23□□□□□ -0.93
CCDC57-211ENST00000578187 DEFB4AO15263 64 aa9.23□□□□□ -0.93
CCDC57-211ENST00000578187 NDUFB4O95168 129 aa9.23□□□□□ -0.93
CCDC57-211ENST00000578187 FXYD7P58549 80 aa9.23□□□□□ -0.93
CCDC57-211ENST00000578187 RHOBP62745 196 aa9.23□□□□□ -0.93
CCDC57-211ENST00000578187 LCE2CQ5TA81 110 aa9.23□□□□□ -0.93
CCDC57-211ENST00000578187 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
CCDC57-211ENST00000578187 OR2G3Q8NGZ4 309 aa9.23□□□□□ -0.93
CCDC57-211ENST00000578187 FXYD5Q96DB9 178 aa9.23□□□□□ -0.93
CCDC57-211ENST00000578187 PSMG3Q9BT73 122 aaPredicted RBP9.23□□□□□ -0.93
CCDC57-211ENST00000578187 AMBPP02760 352 aa9.22□□□□□ -0.93
CCDC57-211ENST00000578187 ZNF705DP0CH99 300 aaPredicted RBP9.22□□□□□ -0.93
CCDC57-211ENST00000578187 ZNF705BP0CI00 300 aaPredicted RBP9.22□□□□□ -0.93
CCDC57-211ENST00000578187 M6PRP20645 277 aa9.22□□□□□ -0.93
CCDC57-211ENST00000578187 HIST1H1AQ02539 215 aaPredicted RBP9.22□□□□□ -0.93
CCDC57-211ENST00000578187 ACOT6Q3I5F7 207 aaPredicted RBP9.22□□□□□ -0.93
CCDC57-211ENST00000578187 LCE2AQ5TA79 106 aaPredicted RBP9.22□□□□□ -0.93
CCDC57-211ENST00000578187 HSD17B11Q8NBQ5 300 aa9.22□□□□□ -0.93
CCDC57-211ENST00000578187 MRPL53Q96EL3 112 aaKnown RBP9.22□□□□□ -0.93
CCDC57-211ENST00000578187 ZNF503Q96F45 646 aa9.22□□□□□ -0.93
CCDC57-211ENST00000578187 PAXXQ9BUH6 204 aa9.22□□□□□ -0.93
CCDC57-211ENST00000578187 OR51M1Q9H341 326 aa9.22□□□□□ -0.93
CCDC57-211ENST00000578187 IGHV4-28A0A0C4DH34 117 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 ZNF705FA8MVS1 300 aaPredicted RBP9.21□□□□□ -0.94
CCDC57-211ENST00000578187 PRAC2D3DTV9 90 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 SMLR1H3BR10 107 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 BOLA2-SMG1P6H3BVE0 249 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 ARPC5O15511 151 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 ATP6V0CP27449 155 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 TAS2R45P59539 299 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 RAB2AP61019 212 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 SPINK13Q1W4C9 94 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 KHDC3LQ587J8 217 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 RPL7L1Q6DKI1 246 aaKnown RBP9.21□□□□□ -0.94
CCDC57-211ENST00000578187 RPP25LQ8N5L8 163 aaKnown RBP9.21□□□□□ -0.94
CCDC57-211ENST00000578187 BLNKQ8WV28 456 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 IGF2BP2-AS1Q96M15 143 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 NEU1Q99519 415 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 PRELID1Q9Y255 219 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 ALMS1Q8TCU4 4167 aa9.21□□□□□ -0.94
CCDC57-211ENST00000578187 BORCS7-ASMTA0A0B4J1R7 106 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 IGLL5B9A064 214 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 M0R2Z0 102 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 CRXO43186 299 aaPredicted RBP9.2□□□□□ -0.94
CCDC57-211ENST00000578187 OR7C2O60412 319 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 OR10J4P0C629 311 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 NBEAP1P0C6P0 100 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 RBMY1A1P0DJD3 496 aaKnown RBP9.2□□□□□ -0.94
CCDC57-211ENST00000578187 RBMY1CP0DJD4 496 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 PRB4P10163 310 aaPredicted RBP9.2□□□□□ -0.94
CCDC57-211ENST00000578187 ZNF345Q14585 488 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 RBMY1FQ15415 496 aaKnown RBP9.2□□□□□ -0.94
CCDC57-211ENST00000578187 C1orf158Q8N1D5 194 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 RNF141Q8WVD5 230 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 SH3BGRL3Q9H299 93 aa9.2□□□□□ -0.94
CCDC57-211ENST00000578187 TRAV10A0A0B4J240 114 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 SMIM9A6NGZ8 99 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 NPIPB6E9PJ23 425 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 M0R3E3 92 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 TAAR5O14804 337 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 INSP01308 110 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 UBE2L3P68036 154 aaKnown RBP9.19□□□□□ -0.94
CCDC57-211ENST00000578187 SERF2P84101 59 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 FAM122CQ6P4D5 195 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 Q6ZNX1 250 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 EXOC3-AS1Q8N2X6 119 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 OR10G4Q8NGN3 311 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 OR10G9Q8NGN4 311 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 OR10G7Q8NGN6 311 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 OR10J6PQ8NGY7 276 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 GNPNAT1Q96EK6 184 aaPredicted RBP9.19□□□□□ -0.94
CCDC57-211ENST00000578187 PHYHIPLQ96FC7 376 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 AAMDCQ9H7C9 122 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 GOLT1BQ9Y3E0 138 aa9.19□□□□□ -0.94
CCDC57-211ENST00000578187 A0A1W2PPV4 95 aa9.18□□□□□ -0.94
CCDC57-211ENST00000578187 HMSDA8MTL9 139 aa9.18□□□□□ -0.94
CCDC57-211ENST00000578187 EIF3GO75821 320 aaKnown RBP eCLIP9.18□□□□□ -0.94
CCDC57-211ENST00000578187 MBP02144 154 aa9.18□□□□□ -0.94
CCDC57-211ENST00000578187 CDC34P49427 236 aaPredicted RBP9.18□□□□□ -0.94
CCDC57-211ENST00000578187 ICAM4Q14773 271 aa9.18□□□□□ -0.94
CCDC57-211ENST00000578187 PQLC2Q6ZP29 291 aa9.18□□□□□ -0.94
CCDC57-211ENST00000578187 BAP18Q8IXM2 172 aa9.18□□□□□ -0.94
CCDC57-211ENST00000578187 OR11H4Q8NGC9 324 aa9.18□□□□□ -0.94
CCDC57-211ENST00000578187 CYTL1Q9NRR1 136 aa9.18□□□□□ -0.94
CCDC57-211ENST00000578187 STAG3L2P0CL84 134 aa9.17□□□□□ -0.94
CCDC57-211ENST00000578187 STAG3L3P0CL85 134 aa9.17□□□□□ -0.94
CCDC57-211ENST00000578187 CDKN1BP46527 198 aa9.17□□□□□ -0.94
CCDC57-211ENST00000578187 LYPD1Q8N2G4 141 aa9.17□□□□□ -0.94
CCDC57-211ENST00000578187 KCNRGQ8N5I3 272 aa9.17□□□□□ -0.94
CCDC57-211ENST00000578187 BIRC6Q9NR09 4857 aa9.17□□□□□ -0.94
CCDC57-211ENST00000578187 PLECQ15149 4684 aaKnown RBP9.16□□□□□ -0.94
CCDC57-211ENST00000578187 TRAV12-2A0A075B6T6 113 aa9.16□□□□□ -0.94
CCDC57-211ENST00000578187 IGHV3OR16-12A0A075B7B8 117 aa9.16□□□□□ -0.94
CCDC57-211ENST00000578187 ST6GAL2Q96JF0 529 aa9.16□□□□□ -0.94
CCDC57-211ENST00000578187 ARPC5LQ9BPX5 153 aa9.16□□□□□ -0.94
CCDC57-211ENST00000578187 Q9H3A6 140 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms