RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 POLR2GP62487 172 aaKnown RBP eCLIP7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 PPP1R1AQ13522 171 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 FUT9Q9Y231 359 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 MYCBP2O75592 4640 aa7.96□□□□□ -1.14
CTDNEP1-212ENST00000576613 A0A087WTM6 91 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 TRGV1A0A0A0MS02 117 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 SLC17A3O00476 420 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 COX7A2P2O60397 106 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 SNRPCP09234 159 aaKnown RBP7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 SMIM18P0DKX4 95 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 CT45A10P0DMU9 189 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 KRTAP10-1P60331 282 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 ID3Q02535 119 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 SLC38A11Q08AI6 406 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 C4orf46Q504U0 113 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 TOMM5Q8N4H5 51 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 ZBTB8BQ8NAP8 495 aaPredicted RBP7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 OR10P1Q8NGE3 313 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 MCFD2Q8NI22 146 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 ZNF431Q8TF32 576 aaPredicted RBP7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 GSN-AS1Q9NRJ2 163 aa7.95□□□□□ -1.14
CTDNEP1-212ENST00000576613 LINC00854A0A1B0GVQ3 168 aa7.94□□□□□ -1.14
CTDNEP1-212ENST00000576613 NPIPB6E9PJ23 425 aa7.94□□□□□ -1.14
CTDNEP1-212ENST00000576613 PAX4O43316 350 aa7.94□□□□□ -1.14
CTDNEP1-212ENST00000576613 SLC25A5P05141 298 aaKnown RBP7.94□□□□□ -1.14
CTDNEP1-212ENST00000576613 METTL15P1P0C7V9 234 aa7.94□□□□□ -1.14
CTDNEP1-212ENST00000576613 DNAH10OSP0CZ25 163 aa7.94□□□□□ -1.14
CTDNEP1-212ENST00000576613 GUK1Q16774 197 aa7.94□□□□□ -1.14
CTDNEP1-212ENST00000576613 DYNC2LI1Q8TCX1 351 aa7.94□□□□□ -1.14
CTDNEP1-212ENST00000576613 SMIM8Q96KF7 97 aa7.94□□□□□ -1.14
CTDNEP1-212ENST00000576613 FAT1Q14517 4588 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 C7orf71A4D174 169 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 H3BTX0 84 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 K7EP13 123 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 AGPAT2O15120 278 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 ZNF324O75467 553 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 SMR3BP02814 79 aaPredicted RBP7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 IGLC2P0DOY2 106 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 GCSHP23434 173 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 TNFSF8P32971 234 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 UBE2MP61081 183 aaKnown RBP7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 SLAQ13239 276 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 C10orf113Q5VZT2 155 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 TMEM14EPQ6UXP3 125 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 Q6ZSN1 163 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 C11orf72Q8NBR9 251 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 RAB2BQ8WUD1 216 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 DEDD2Q8WXF8 326 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 TRIM63Q969Q1 353 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 ST6GAL2Q96JF0 529 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 SOSTQ9BQB4 213 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 PRO0255Q9UI72 69 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 TNFRSF18Q9Y5U5 241 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 LY96Q9Y6Y9 160 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 VPS13BQ7Z7G8 4022 aa7.93□□□□□ -1.14
CTDNEP1-212ENST00000576613 FLG2Q5D862 2391 aaPredicted RBP7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 CCNKO75909 580 aa7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 OPCMLQ14982 345 aa7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 MRPL23Q16540 153 aaKnown RBP7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 ANXA2RQ3ZCQ2 193 aa7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 PYDC2Q56P42 97 aa7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 EIF4E3Q8N5X7 224 aaKnown RBP7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 SAT2Q96F10 170 aaPredicted RBP7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 LINC00467Q9BRT7 94 aa7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 GGACTQ9BVM4 153 aa7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 MRPS26Q9BYN8 205 aaKnown RBP7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 MSRB1Q9NZV6 116 aa7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 MDFICQ9P1T7 246 aa7.92□□□□□ -1.14
CTDNEP1-212ENST00000576613 H3BQ15 152 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 J3QL48 77 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 SPINK4O60575 86 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 TSC22D2O75157 780 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 EVI2AP22794 236 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 TCL1AP56279 114 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 TAS2R30P59541 319 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 IBA57Q5T440 356 aaKnown RBP7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 MORN5Q5VZ52 161 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 LYPD5Q6UWN5 251 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 Q6ZRG5 221 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 NEGR1Q7Z3B1 354 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 TMEM37Q8WXS4 190 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 MRPL53Q96EL3 112 aaKnown RBP7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 BCL7BQ9BQE9 202 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 SLIRPQ9GZT3 109 aaKnown RBP7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 HHLA3Q9XRX5 114 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 KLF12Q9Y4X4 402 aa7.91□□□□□ -1.14
CTDNEP1-212ENST00000576613 C9orf170A2RU37 121 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 KLLNB2CW77 178 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 ZNF253O75346 499 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 MPDU1O75352 247 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 SCGB1D2O95969 90 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 IGHV3-53P01767 116 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 OR4E1P0C645 316 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 CRYBA4P53673 196 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 RAB31Q13636 194 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 MGST2Q99735 147 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 VGLL1Q99990 258 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 TMEM70Q9BUB7 260 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 DNAJC4Q9NNZ3 241 aa7.9□□□□□ -1.14
CTDNEP1-212ENST00000576613 RGS13O14921 159 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms