RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TMEM167BQ9NRX6 74 aa5.88□□□□□ -1.47
CCDC40-215ENST00000576033 RABAC1Q9UI14 185 aa5.88□□□□□ -1.47
CCDC40-215ENST00000576033 YTHDF2Q9Y5A9 579 aaKnown RBP5.88□□□□□ -1.47
CCDC40-215ENST00000576033 AGRNO00468 2067 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 A0A1W2PRE2 83 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 OR11H12B2RN74 326 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 TSPAN4O14817 238 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 BUB3O43684 328 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 COX7A2P2O60397 106 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 RPL11P62913 178 aaKnown RBP5.87□□□□□ -1.47
CCDC40-215ENST00000576033 C10orf113Q5VZT2 155 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 IGFL4Q6B9Z1 124 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 GTSCR1Q86UQ5 136 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 CBLN2Q8IUK8 224 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 OR2K2Q8NGT1 345 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 TVP23CQ96ET8 276 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 FAM110AQ9BQ89 295 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 PARLQ9H300 379 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 SRD5A3Q9H8P0 318 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 MAP6D1Q9H9H5 199 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 SMAD5-AS1Q9Y6J3 95 aa5.87□□□□□ -1.47
CCDC40-215ENST00000576033 TRAV5A0A0B4J249 113 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 B4DEV8 164 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 GGTLC3B5MD39 225 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 H3BRN7 92 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 H3BTX0 84 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 HYPMO75409 117 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 FABP1P07148 127 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 ZNF688P0C7X2 276 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 RPL35AP18077 110 aaKnown RBP5.86□□□□□ -1.47
CCDC40-215ENST00000576033 SIGLEC15Q6ZMC9 328 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 DCANP1Q8TF63 244 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 FXYD5Q96DB9 178 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 SPAG8Q99932 426 aaPredicted RBP5.86□□□□□ -1.47
CCDC40-215ENST00000576033 NIPSNAP3BQ9BS92 247 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 SMCO4Q9NRQ5 59 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 TMEM242Q9NWH2 141 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 TMEM14CQ9P0S9 112 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 NAT8Q9UHE5 227 aa5.86□□□□□ -1.47
CCDC40-215ENST00000576033 KNCNA6PVL3 124 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 COLCA2A8K830 154 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 ZNF727A8MUV8 499 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 K7EQG2 157 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 MRPS12O15235 138 aaKnown RBP5.85□□□□□ -1.47
CCDC40-215ENST00000576033 SCGB2A1O75556 95 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 HLA-DMBP28068 263 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 DEFB131AP59861 70 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 GDF5OSQ5U4N7 250 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 TMEM88Q6PEY1 159 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 LINC00305Q7Z4B0 112 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 C2CD4CQ8TF44 421 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 C20orf173Q96LM9 149 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 B9D2Q9BPU9 175 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 SMIM7Q9BQ49 75 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 TCEAL7Q9BRU2 100 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 SHANK2-AS3Q9BTD1 123 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 SLC25A39Q9BZJ4 359 aaPredicted RBP5.85□□□□□ -1.47
CCDC40-215ENST00000576033 OR51M1Q9H341 326 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 LY96Q9Y6Y9 160 aa5.85□□□□□ -1.47
CCDC40-215ENST00000576033 TRBV20OR9-2A0A075B6H5 130 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 TRAV25A0A0B4J276 109 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 SCO2A0A1W2PP80 73 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 CXorf65A6NEN9 183 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 OR4C46A6NHA9 309 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 ZNF98A6NK75 572 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 C9JCJ5 164 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 F6UB75 175 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 M0R036 132 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 SOCS3O14543 225 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 OR7C2O60412 319 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 PYYP10082 97 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 UBE2G2P60604 165 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 RPL23P62829 140 aaKnown RBP5.84□□□□□ -1.47
CCDC40-215ENST00000576033 UBE2L3P68036 154 aaKnown RBP5.84□□□□□ -1.47
CCDC40-215ENST00000576033 TMEM241Q24JQ0 296 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 PSMG4Q5JS54 123 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 CST9LP1Q5W188 147 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 IQCF2Q8IXL9 164 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 RNF182Q8N6D2 247 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 C15orf54Q8N8G6 183 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 RPUSD4Q96CM3 377 aaKnown RBP5.84□□□□□ -1.47
CCDC40-215ENST00000576033 PAXXQ9BUH6 204 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 DERL1Q9BUN8 251 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 RPS10P5Q9NQ39 176 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 HIGD1AQ9Y241 93 aa5.84□□□□□ -1.47
CCDC40-215ENST00000576033 STARD9Q9P2P6 4700 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 TRAV8-2A0A0B4J237 113 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 SLC17A3O00476 420 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 NDUFB4O95168 129 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 OR10J4P0C629 311 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 IGLC2P0DOY2 106 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 AKR1C3P42330 323 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 CEBPGP53567 150 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 LINC00322Q6ZN03 302 aaPredicted RBP5.83□□□□□ -1.48
CCDC40-215ENST00000576033 LINC01551Q86U37 167 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 CTDSP1Q9GZU7 261 aa5.83□□□□□ -1.48
CCDC40-215ENST00000576033 DYNC2H1Q8NCM8 4307 aaKnown RBP5.83□□□□□ -1.48
CCDC40-215ENST00000576033 A0A1W2PS18 150 aa5.82□□□□□ -1.48
CCDC40-215ENST00000576033 IGKV3-20P01619 116 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms