RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 RBMY1FQ15415 496 aaKnown RBP9.82□□□□□ -0.84
CIITA-210ENST00000575513 C11orf45Q8TAV5 145 aa9.82□□□□□ -0.84
CIITA-210ENST00000575513 MRPL53Q96EL3 112 aaKnown RBP9.82□□□□□ -0.84
CIITA-210ENST00000575513 IGF2BP2-AS1Q96M15 143 aa9.82□□□□□ -0.84
CIITA-210ENST00000575513 GOLT1BQ9Y3E0 138 aa9.82□□□□□ -0.84
CIITA-210ENST00000575513 DYNC2H1Q8NCM8 4307 aaKnown RBP9.82□□□□□ -0.84
CIITA-210ENST00000575513 TMEM189A5PLL7 270 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 SLC17A3O00476 420 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 BCL2L11O43521 198 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 HLA-DMBP28068 263 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 TAS2R45P59539 299 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 RAB2AP61019 212 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 OR10G4Q8NGN3 311 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 OR10G9Q8NGN4 311 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 OR10G7Q8NGN6 311 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 HYLS1Q96M11 299 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 SH3BGRL3Q9H299 93 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 OR51M1Q9H341 326 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 PRELID1Q9Y255 219 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
CIITA-210ENST00000575513 KANTRA0A1W2PQU2 76 aa9.8□□□□□ -0.84
CIITA-210ENST00000575513 CXorf65A6NEN9 183 aa9.8□□□□□ -0.84
CIITA-210ENST00000575513 SNRPCP09234 159 aaKnown RBP9.8□□□□□ -0.84
CIITA-210ENST00000575513 FXYD7P58549 80 aa9.8□□□□□ -0.84
CIITA-210ENST00000575513 HIST1H1AQ02539 215 aaPredicted RBP9.8□□□□□ -0.84
CIITA-210ENST00000575513 KHDC3LQ587J8 217 aa9.8□□□□□ -0.84
CIITA-210ENST00000575513 CEMP1Q6PRD7 247 aaPredicted RBP9.8□□□□□ -0.84
CIITA-210ENST00000575513 TMUB2Q71RG4 321 aa9.8□□□□□ -0.84
CIITA-210ENST00000575513 RPP25LQ8N5L8 163 aaKnown RBP9.8□□□□□ -0.84
CIITA-210ENST00000575513 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
CIITA-210ENST00000575513 A0A1W2PPV4 95 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 H3BTX0 84 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 BOLA2-SMG1P6H3BVE0 249 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 DEFB4AO15263 64 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 NDUFB4O95168 129 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 NBEAP1P0C6P0 100 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 PYYP10082 97 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 EIF5AP63241 154 aaKnown RBP9.79□□□□□ -0.84
CIITA-210ENST00000575513 PQLC2Q6ZP29 291 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 C1orf158Q8N1D5 194 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 OR10J6PQ8NGY7 276 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 FXYD5Q96DB9 178 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 ZNF503Q96F45 646 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 PPP1R14DQ9NXH3 145 aa9.79□□□□□ -0.84
CIITA-210ENST00000575513 KLK5Q9Y337 293 aaPredicted RBP9.79□□□□□ -0.84
CIITA-210ENST00000575513 CRXO43186 299 aaPredicted RBP9.78□□□□□ -0.84
CIITA-210ENST00000575513 OR7C2O60412 319 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 INSP01308 110 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 TSPOP30536 169 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 CDC34P49427 236 aaPredicted RBP9.78□□□□□ -0.84
CIITA-210ENST00000575513 CD300CQ08708 224 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 PMS2P11Q13670 270 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 SPINK13Q1W4C9 94 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 LGALSLQ3ZCW2 172 aaPredicted RBP9.78□□□□□ -0.84
CIITA-210ENST00000575513 FAM122CQ6P4D5 195 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 LYPD1Q8N2G4 141 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 PHLDA1Q8WV24 401 aaPredicted RBP9.78□□□□□ -0.84
CIITA-210ENST00000575513 RNF141Q8WVD5 230 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 ODF3Q96PU9 254 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 LYSTQ99698 3801 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 ZNF471Q9BX82 626 aaPredicted RBP9.78□□□□□ -0.84
CIITA-210ENST00000575513 AAMDCQ9H7C9 122 aa9.78□□□□□ -0.84
CIITA-210ENST00000575513 LCE6AA0A183 80 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 C11orf94C9JXX5 98 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 PRAC2D3DTV9 90 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 M0R2Z0 102 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 PFDN1O60925 122 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 HBE1P02100 147 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 SEC11BP0C7V7 166 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 STAG3L2P0CL84 134 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 STAG3L3P0CL85 134 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 CDKN1BP46527 198 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 NANOS2P60321 138 aaKnown RBP9.77□□□□□ -0.85
CIITA-210ENST00000575513 TMEM256Q8N2U0 113 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 STOML3Q8TAV4 291 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 BLNKQ8WV28 456 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 RAB24Q969Q5 203 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 C20orf144Q9BQM9 153 aa9.77□□□□□ -0.85
CIITA-210ENST00000575513 ACTR3CQ9C0K3 210 aaPredicted RBP9.77□□□□□ -0.85
CIITA-210ENST00000575513 IGHV3OR16-12A0A075B7B8 117 aa9.76□□□□□ -0.85
CIITA-210ENST00000575513 TEX48A0A1B0GUV7 120 aa9.76□□□□□ -0.85
CIITA-210ENST00000575513 NPIPB6E9PJ23 425 aa9.76□□□□□ -0.85
CIITA-210ENST00000575513 OR10J4P0C629 311 aa9.76□□□□□ -0.85
CIITA-210ENST00000575513 UBE2L3P68036 154 aaKnown RBP9.76□□□□□ -0.85
CIITA-210ENST00000575513 RRN3P1Q2M238 152 aa9.76□□□□□ -0.85
CIITA-210ENST00000575513 AKR1C8PQ5T2L2 129 aa9.76□□□□□ -0.85
CIITA-210ENST00000575513 BAP18Q8IXM2 172 aa9.76□□□□□ -0.85
CIITA-210ENST00000575513 LINC00477Q96M19 166 aa9.76□□□□□ -0.85
CIITA-210ENST00000575513 TMEM208Q9BTX3 173 aa9.76□□□□□ -0.85
CIITA-210ENST00000575513 PLECQ15149 4684 aaKnown RBP9.76□□□□□ -0.85
CIITA-210ENST00000575513 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
CIITA-210ENST00000575513 SPART-AS1P0CW21 52 aa9.75□□□□□ -0.85
CIITA-210ENST00000575513 TPT1P13693 172 aaKnown RBP9.75□□□□□ -0.85
CIITA-210ENST00000575513 TCTAP57738 103 aa9.75□□□□□ -0.85
CIITA-210ENST00000575513 ZFP69Q49AA0 526 aa9.75□□□□□ -0.85
CIITA-210ENST00000575513 SUN5Q8TC36 379 aa9.75□□□□□ -0.85
CIITA-210ENST00000575513 CTXND1A0A1B0GTU2 59 aa9.74□□□□□ -0.85
CIITA-210ENST00000575513 UMAD1C9J7I0 102 aa9.74□□□□□ -0.85
CIITA-210ENST00000575513 M0R3E3 92 aa9.74□□□□□ -0.85
CIITA-210ENST00000575513 EIF3GO75821 320 aaKnown RBP eCLIP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms