RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 BLCAPP62952 87 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 HBBP68871 147 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 MAPK1IP1LQ8NDC0 245 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 METTL26Q96S19 204 aa10.85□□□□□ -0.67
VPS33B-208ENST00000574755 ZNF207O43670 478 aaKnown RBP10.85□□□□□ -0.67
VPS33B-208ENST00000574755 HLA-DMBP28068 263 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 PAFAH1B2P68402 229 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 ARL6IP6Q8N6S5 226 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 ATP6V0BQ99437 205 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 SAMD10Q9BYL1 202 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 A0A096LNT2 108 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 TGFAP01135 160 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
VPS33B-208ENST00000574755 PPIFP30405 207 aaKnown RBP10.84□□□□□ -0.67
VPS33B-208ENST00000574755 CRIP1P50238 77 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 C16orf54Q6UWD8 224 aa10.84□□□□□ -0.67
VPS33B-208ENST00000574755 A0A087X0K7 114 aa10.83□□□□□ -0.68
VPS33B-208ENST00000574755 ZNF705FA8MVS1 300 aaPredicted RBP10.83□□□□□ -0.68
VPS33B-208ENST00000574755 ARL3P36405 182 aa10.83□□□□□ -0.68
VPS33B-208ENST00000574755 Q6ZS46 218 aa10.83□□□□□ -0.68
VPS33B-208ENST00000574755 RCHY1Q96PM5 261 aa10.83□□□□□ -0.68
VPS33B-208ENST00000574755 USP9YO00507 2555 aaPredicted RBP10.83□□□□□ -0.68
VPS33B-208ENST00000574755 CSPG4Q6UVK1 2322 aa10.83□□□□□ -0.68
VPS33B-208ENST00000574755 IGHG4P01861 327 aa10.83□□□□□ -0.68
VPS33B-208ENST00000574755 C1orf194Q5T5A4 169 aa10.83□□□□□ -0.68
VPS33B-208ENST00000574755 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
VPS33B-208ENST00000574755 A8MWP6 167 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 PF4V1P10720 104 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 KRTAP10-9P60411 292 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 PRR31Q5SQ13 230 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 SAPCD1Q5SSQ6 148 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 Q8TAT8 98 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
VPS33B-208ENST00000574755 RNF223E7ERA6 249 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 H3BUA1 57 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 SCGB1D1O95968 90 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 IQCJQ1A5X6 159 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 C18orf32Q8TCD1 76 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 KCNS1Q96KK3 526 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 PRR25Q96S07 402 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 VGLL1Q99990 258 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 SLC50A1Q9BRV3 221 aa10.82□□□□□ -0.68
VPS33B-208ENST00000574755 J3QLI3 93 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 TRBV12-3P01733 135 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 FOXA3P55318 350 aaPredicted RBP10.81□□□□□ -0.68
VPS33B-208ENST00000574755 DEFB112Q30KQ8 113 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 RNF182Q8N6D2 247 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 USMG5Q96IX5 58 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 ZANQ9Y493 2812 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 IGHV3-11P01762 117 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 FAM162BQ5T6X4 162 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 SIGLECL1Q8N7X8 197 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 KLK15Q9H2R5 256 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 PTPN13Q12923 2485 aa10.81□□□□□ -0.68
VPS33B-208ENST00000574755 BRI3O95415 125 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 IGHV4-59P01825 116 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 Q6ZWC4 215 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 ALKBH7Q9BT30 221 aaPredicted RBP10.8□□□□□ -0.68
VPS33B-208ENST00000574755 TPPP3Q9BW30 176 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 A0A1W2PS18 150 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 TSTD3H0UI37 97 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 HAX1O00165 279 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 SH2D1AO60880 128 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 GPX1P07203 203 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 CD33P20138 364 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 AMTP48728 403 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 LOXL1Q08397 574 aaPredicted RBP10.8□□□□□ -0.68
VPS33B-208ENST00000574755 U3KQE9 123 aa10.8□□□□□ -0.68
VPS33B-208ENST00000574755 A0A1B0GUT8 65 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 PMCHP20382 165 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 PKIAP61925 76 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 UNQ9165/PRO28630Q6UXU0 137 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 LCNL1Q6ZST4 164 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 NDFIP1Q9BT67 221 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 PRO1933Q9H354 126 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 ABCA12Q86UK0 2595 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 TMSB15BA0A087X1C1 80 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.79□□□□□ -0.68
VPS33B-208ENST00000574755 TMEM189A5PLL7 270 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 PRAC2D3DTV9 90 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 NDUFA4O00483 81 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 ARMS2P0C7Q2 107 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 DEFB113Q30KQ7 82 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 Q6AWC8 147 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 C8orf86Q6ZUL3 223 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 COX8CQ7Z4L0 72 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 NAGKQ9UJ70 344 aa10.79□□□□□ -0.68
VPS33B-208ENST00000574755 ZNF324O75467 553 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-208ENST00000574755 IGLV1-40P01703 118 aa10.78□□□□□ -0.68
VPS33B-208ENST00000574755 ERCC8Q13216 396 aa10.78□□□□□ -0.68
VPS33B-208ENST00000574755 KLF5Q13887 457 aaPredicted RBP10.78□□□□□ -0.68
VPS33B-208ENST00000574755 OR4X2Q8NGF9 303 aa10.78□□□□□ -0.68
VPS33B-208ENST00000574755 A0A0G2JLM5 398 aa10.77□□□□□ -0.68
VPS33B-208ENST00000574755 TMEM95Q3KNT9 176 aa10.77□□□□□ -0.68
VPS33B-208ENST00000574755 BORCS7Q96B45 105 aa10.77□□□□□ -0.68
VPS33B-208ENST00000574755 BEX4Q9NWD9 120 aaPredicted RBP10.77□□□□□ -0.68
VPS33B-208ENST00000574755 CR1P17927 2039 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms