RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ZNF709Q8N972 641 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 ENKURQ8TC29 256 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 ZNF503Q96F45 646 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 MGST2Q99735 147 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 DNAJC4Q9NNZ3 241 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 GOLT1BQ9Y3E0 138 aa5.34□□□□□ -1.55
NUP88-205ENST00000572809 DNAH1Q9P2D7 4330 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 A0A087X0K7 114 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 TMEM189A5PLL7 270 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 A8MTW9 85 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 COX7A2P2O60397 106 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 RLN2P04090 185 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 SPART-AS1P0CW21 52 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 SULT1A1P50225 295 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 CNN1P51911 297 aaKnown RBP5.33□□□□□ -1.56
NUP88-205ENST00000572809 EMP1P54849 157 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 IFITM3Q01628 133 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 PSG3Q16557 428 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 ATP6V1FQ16864 119 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 C12orf74Q32Q52 190 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 C10orf113Q5VZT2 155 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 TMEM88Q6PEY1 159 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 AMTNQ6UX39 209 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 Q6ZTC4 211 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 ZNF767PQ75MW2 155 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 NRARPQ7Z6K4 114 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 BPIFA4PQ86YQ2 179 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 TMEM252Q8N6L7 170 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 ZNF738Q8NE65 137 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 TMEM37Q8WXS4 190 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 LYRM2Q9NU23 88 aaPredicted RBP5.33□□□□□ -1.56
NUP88-205ENST00000572809 UQCC1Q9NVA1 299 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 PTTG2Q9NZH5 202 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 APLNQ9ULZ1 77 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 CELA1Q9UNI1 258 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 RFNGQ9Y644 331 aa5.33□□□□□ -1.56
NUP88-205ENST00000572809 DEFB131BA0A096LNP1 70 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 INMT-MINDY4F8WBC2 141 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 MRPS12O15235 138 aaKnown RBP5.32□□□□□ -1.56
NUP88-205ENST00000572809 PRAF2O60831 178 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 SIX6O95475 246 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 HBE1P02100 147 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 AMBPP02760 352 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 SNRPCP09234 159 aaKnown RBP5.32□□□□□ -1.56
NUP88-205ENST00000572809 CXCL3P19876 107 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 RPL29P47914 159 aaKnown RBP5.32□□□□□ -1.56
NUP88-205ENST00000572809 RHOBP62745 196 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 HBG1P69891 147 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 HBG2P69892 147 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 CYCSP99999 105 aaKnown RBP5.32□□□□□ -1.56
NUP88-205ENST00000572809 BAXQ07812 192 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 RRN3P1Q2M238 152 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 VWC2Q2TAL6 325 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 MIC13Q5XKP0 118 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 STX12Q86Y82 276 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 OR11H7Q8NGC8 314 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 OR8A1Q8NGG7 326 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 OR1L4Q8NGR5 311 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 IGF2BP2-AS1Q96M15 143 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 TMEM208Q9BTX3 173 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 MLST8Q9BVC4 326 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 PPP1R14DQ9NXH3 145 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 WDR83OSQ9Y284 106 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 SACSQ9NZJ4 4579 aa5.32□□□□□ -1.56
NUP88-205ENST00000572809 IGHV4-4A0A075B6R2 117 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 TEX48A0A1B0GUV7 120 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 IGSF23A1L1A6 192 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 E5RGE8 158 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 M0R2Z0 102 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 CRXO43186 299 aaPredicted RBP5.31□□□□□ -1.56
NUP88-205ENST00000572809 CXCL2P19875 107 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 FAM3BP58499 235 aaPredicted RBP5.31□□□□□ -1.56
NUP88-205ENST00000572809 DEFA1P59665 94 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 DEFA3P59666 94 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 B2MP61769 119 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 HIST1H1AQ02539 215 aaPredicted RBP5.31□□□□□ -1.56
NUP88-205ENST00000572809 OPCMLQ14982 345 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 SPINK13Q1W4C9 94 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 MORN5Q5VZ52 161 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 LCN15Q6UWW0 184 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 RPP25LQ8N5L8 163 aaKnown RBP5.31□□□□□ -1.56
NUP88-205ENST00000572809 RPUSD4Q96CM3 377 aaKnown RBP5.31□□□□□ -1.56
NUP88-205ENST00000572809 PFDN5Q99471 154 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 SLC50A1Q9BRV3 221 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 MARVELD1Q9BSK0 173 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 RNF126Q9BV68 326 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 NMES1Q9C002 83 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 SLC25A31Q9H0C2 315 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 ZNF331Q9NQX6 463 aaPredicted RBP5.31□□□□□ -1.56
NUP88-205ENST00000572809 BATF3Q9NR55 127 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 SLC39A9Q9NUM3 307 aa5.31□□□□□ -1.56
NUP88-205ENST00000572809 TRAV5A0A0B4J249 113 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 UBE2L5PA0A1B0GUS4 154 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 ZNF705GA8MUZ8 300 aaPredicted RBP5.3□□□□□ -1.56
NUP88-205ENST00000572809 H0YIZ8 118 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 H3BQ15 152 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 H3BTX0 84 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 PRB4P10163 310 aaPredicted RBP5.3□□□□□ -1.56
NUP88-205ENST00000572809 FGF7P21781 194 aa5.3□□□□□ -1.56
NUP88-205ENST00000572809 GUK1Q16774 197 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms