RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ZNF253O75346 499 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 PSG9Q00887 426 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 PDE6HQ13956 83 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 TMEM41BQ5BJD5 291 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 AMTNQ6UX39 209 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 EXOC3-AS1Q8N2X6 119 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 KCNRGQ8N5I3 272 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 CSNK1G2-AS1Q8NCQ2 148 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 OR10G4Q8NGN3 311 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 OR10G9Q8NGN4 311 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 OR10G7Q8NGN6 311 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 RNF141Q8WVD5 230 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 PHYHIPLQ96FC7 376 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 CLUHP3Q96NS8 147 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 RARRES2Q99969 163 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 CYTL1Q9NRR1 136 aa11.5□□□□□ -0.57
CHD3-215ENST00000572750 A0A1W2PPV4 95 aa11.49□□□□□ -0.57
CHD3-215ENST00000572750 A8MTW9 85 aa11.49□□□□□ -0.57
CHD3-215ENST00000572750 M0R3E3 92 aa11.49□□□□□ -0.57
CHD3-215ENST00000572750 TAAR5O14804 337 aa11.49□□□□□ -0.57
CHD3-215ENST00000572750 TAS2R45P59539 299 aa11.49□□□□□ -0.57
CHD3-215ENST00000572750 GNPNAT1Q96EK6 184 aaPredicted RBP11.49□□□□□ -0.57
CHD3-215ENST00000572750 ARPC5LQ9BPX5 153 aa11.49□□□□□ -0.57
CHD3-215ENST00000572750 C1QTNF4Q9BXJ3 329 aa11.49□□□□□ -0.57
CHD3-215ENST00000572750 PLECQ15149 4684 aaKnown RBP11.48□□□□□ -0.57
CHD3-215ENST00000572750 M0R2Z0 102 aa11.48□□□□□ -0.57
CHD3-215ENST00000572750 JTBO76095 146 aa11.48□□□□□ -0.57
CHD3-215ENST00000572750 DUSP14O95147 198 aaKnown RBP11.48□□□□□ -0.57
CHD3-215ENST00000572750 NBEAP1P0C6P0 100 aa11.48□□□□□ -0.57
CHD3-215ENST00000572750 CDC34P49427 236 aaPredicted RBP11.48□□□□□ -0.57
CHD3-215ENST00000572750 SPINK13Q1W4C9 94 aa11.48□□□□□ -0.57
CHD3-215ENST00000572750 TCTE3Q8IZS6 198 aa11.48□□□□□ -0.57
CHD3-215ENST00000572750 RPP25LQ8N5L8 163 aaKnown RBP11.48□□□□□ -0.57
CHD3-215ENST00000572750 A0A1B0GVG6 124 aa11.47□□□□□ -0.57
CHD3-215ENST00000572750 DEFB4AO15263 64 aa11.47□□□□□ -0.57
CHD3-215ENST00000572750 ARL14EPLP0DKL9 152 aa11.47□□□□□ -0.57
CHD3-215ENST00000572750 SERF2P84101 59 aa11.47□□□□□ -0.57
CHD3-215ENST00000572750 ICAM4Q14773 271 aa11.47□□□□□ -0.57
CHD3-215ENST00000572750 AKAP14Q86UN6 197 aa11.47□□□□□ -0.57
CHD3-215ENST00000572750 MUC7Q8TAX7 377 aa11.47□□□□□ -0.57
CHD3-215ENST00000572750 AAMDCQ9H7C9 122 aa11.47□□□□□ -0.57
CHD3-215ENST00000572750 X6R8D5 127 aa11.47□□□□□ -0.57
CHD3-215ENST00000572750 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.57
CHD3-215ENST00000572750 BOLA2-SMG1P6H3BVE0 249 aa11.46□□□□□ -0.57
CHD3-215ENST00000572750 BCL2L11O43521 198 aa11.46□□□□□ -0.57
CHD3-215ENST00000572750 MBP02144 154 aa11.46□□□□□ -0.57
CHD3-215ENST00000572750 SSX7Q7RTT5 188 aa11.46□□□□□ -0.57
CHD3-215ENST00000572750 BAP18Q8IXM2 172 aa11.46□□□□□ -0.57
CHD3-215ENST00000572750 Q8NAQ8 132 aa11.46□□□□□ -0.57
CHD3-215ENST00000572750 OR10J6PQ8NGY7 276 aa11.46□□□□□ -0.57
CHD3-215ENST00000572750 MRPL53Q96EL3 112 aaKnown RBP11.46□□□□□ -0.57
CHD3-215ENST00000572750 IGHV3OR16-12A0A075B7B8 117 aa11.45□□□□□ -0.58
CHD3-215ENST00000572750 IGHV4-28A0A0C4DH34 117 aa11.45□□□□□ -0.58
CHD3-215ENST00000572750 A0A0D9SG52 128 aa11.45□□□□□ -0.58
CHD3-215ENST00000572750 KANTRA0A1W2PQU2 76 aa11.45□□□□□ -0.58
CHD3-215ENST00000572750 CD300CQ08708 224 aa11.45□□□□□ -0.58
CHD3-215ENST00000572750 PQLC2Q6ZP29 291 aa11.45□□□□□ -0.58
CHD3-215ENST00000572750 RAB24Q969Q5 203 aa11.45□□□□□ -0.58
CHD3-215ENST00000572750 ZNF471Q9BX82 626 aaPredicted RBP11.45□□□□□ -0.58
CHD3-215ENST00000572750 PRELID1Q9Y255 219 aa11.45□□□□□ -0.58
CHD3-215ENST00000572750 TRAV12-2A0A075B6T6 113 aa11.44□□□□□ -0.58
CHD3-215ENST00000572750 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
CHD3-215ENST00000572750 PFDN1O60925 122 aa11.44□□□□□ -0.58
CHD3-215ENST00000572750 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
CHD3-215ENST00000572750 STAG3L2P0CL84 134 aa11.44□□□□□ -0.58
CHD3-215ENST00000572750 STAG3L3P0CL85 134 aa11.44□□□□□ -0.58
CHD3-215ENST00000572750 RANP62826 216 aaKnown RBP11.44□□□□□ -0.58
CHD3-215ENST00000572750 ZFAND6Q6FIF0 208 aa11.44□□□□□ -0.58
CHD3-215ENST00000572750 ZNF705AQ6ZN79 300 aaPredicted RBP11.44□□□□□ -0.58
CHD3-215ENST00000572750 TMUB2Q71RG4 321 aa11.44□□□□□ -0.58
CHD3-215ENST00000572750 Q9H3A6 140 aa11.44□□□□□ -0.58
CHD3-215ENST00000572750 C11orf68Q9H3H3 251 aaKnown RBP11.44□□□□□ -0.58
CHD3-215ENST00000572750 PPP1R14DQ9NXH3 145 aa11.44□□□□□ -0.58
CHD3-215ENST00000572750 NPIPB6E9PJ23 425 aa11.43□□□□□ -0.58
CHD3-215ENST00000572750 CRXO43186 299 aaPredicted RBP11.43□□□□□ -0.58
CHD3-215ENST00000572750 INSP01308 110 aa11.43□□□□□ -0.58
CHD3-215ENST00000572750 C1QBP02746 253 aa11.43□□□□□ -0.58
CHD3-215ENST00000572750 ZNF726P1Q15940 193 aa11.43□□□□□ -0.58
CHD3-215ENST00000572750 AKR1C8PQ5T2L2 129 aa11.43□□□□□ -0.58
CHD3-215ENST00000572750 C1orf158Q8N1D5 194 aa11.43□□□□□ -0.58
CHD3-215ENST00000572750 IGF2BP2-AS1Q96M15 143 aa11.43□□□□□ -0.58
CHD3-215ENST00000572750 ACTR3CQ9C0K3 210 aaPredicted RBP11.43□□□□□ -0.58
CHD3-215ENST00000572750 RBMY1A1P0DJD3 496 aaKnown RBP11.42□□□□□ -0.58
CHD3-215ENST00000572750 RBMY1CP0DJD4 496 aa11.42□□□□□ -0.58
CHD3-215ENST00000572750 MIFP14174 115 aa11.42□□□□□ -0.58
CHD3-215ENST00000572750 GCHFRP30047 84 aa11.42□□□□□ -0.58
CHD3-215ENST00000572750 ERCC8Q13216 396 aa11.42□□□□□ -0.58
CHD3-215ENST00000572750 RBMY1FQ15415 496 aaKnown RBP11.42□□□□□ -0.58
CHD3-215ENST00000572750 IL17DQ8TAD2 202 aa11.42□□□□□ -0.58
CHD3-215ENST00000572750 GOLT1BQ9Y3E0 138 aa11.42□□□□□ -0.58
CHD3-215ENST00000572750 AMBPP02760 352 aa11.41□□□□□ -0.58
CHD3-215ENST00000572750 CT45A10P0DMU9 189 aa11.41□□□□□ -0.58
CHD3-215ENST00000572750 PMS2P11Q13670 270 aa11.41□□□□□ -0.58
CHD3-215ENST00000572750 KIR3DS1Q14943 382 aa11.41□□□□□ -0.58
CHD3-215ENST00000572750 IQCF2Q8IXL9 164 aa11.41□□□□□ -0.58
CHD3-215ENST00000572750 HYLS1Q96M11 299 aa11.41□□□□□ -0.58
CHD3-215ENST00000572750 TMEM208Q9BTX3 173 aa11.41□□□□□ -0.58
CHD3-215ENST00000572750 CTXND1A0A1B0GTU2 59 aa11.4□□□□□ -0.58
CHD3-215ENST00000572750 J3KRW8 73 aa11.4□□□□□ -0.58
CHD3-215ENST00000572750 CXorf1O96002 111 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms