RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ZNF705EA8MWA4 302 aaPredicted RBP5.05□□□□□ -1.6
SMG6-209ENST00000571442 OR7C2O60412 319 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 ZNF253O75346 499 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 NBEAP1P0C6P0 100 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 RHOBP62745 196 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 PSG9Q00887 426 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 HIST1H1AQ02539 215 aaPredicted RBP5.05□□□□□ -1.6
SMG6-209ENST00000571442 ERCC8Q13216 396 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 ZNF345Q14585 488 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 ICAM4Q14773 271 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 SPINK13Q1W4C9 94 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 ACOT6Q3I5F7 207 aaPredicted RBP5.05□□□□□ -1.6
SMG6-209ENST00000571442 LGALSLQ3ZCW2 172 aaPredicted RBP5.05□□□□□ -1.6
SMG6-209ENST00000571442 SAMD13Q5VXD3 122 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 ZFAND6Q6FIF0 208 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 EBLN2Q6P2I7 272 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 BAP18Q8IXM2 172 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 TCTE3Q8IZS6 198 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 OR10G4Q8NGN3 311 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 OR10G9Q8NGN4 311 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 OR10G7Q8NGN6 311 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 MUC7Q8TAX7 377 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 LRRC20Q8TCA0 184 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 CLUHP3Q96NS8 147 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 RARRES2Q99969 163 aa5.05□□□□□ -1.6
SMG6-209ENST00000571442 TENM2Q9NT68 2774 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 RYR2Q92736 4967 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 IGKV2-40A0A087WW87 121 aaPredicted RBP5.04□□□□□ -1.6
SMG6-209ENST00000571442 IGHV4-28A0A0C4DH34 117 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 IGKV2D-40P01614 121 aaPredicted RBP5.04□□□□□ -1.6
SMG6-209ENST00000571442 STAG3L2P0CL84 134 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 STAG3L3P0CL85 134 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 ARL14EPLP0DKL9 152 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 CT45A10P0DMU9 189 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 CDC34P49427 236 aaPredicted RBP5.04□□□□□ -1.6
SMG6-209ENST00000571442 FHITP49789 147 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 UBE2L3P68036 154 aaKnown RBP5.04□□□□□ -1.6
SMG6-209ENST00000571442 GUK1Q16774 197 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 ZNF705AQ6ZN79 300 aaPredicted RBP5.04□□□□□ -1.6
SMG6-209ENST00000571442 Q6ZQT7 251 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 TMUB2Q71RG4 321 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 S100A7AQ86SG5 101 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 RAB24Q969Q5 203 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 VGLL1Q99990 258 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 ARPC5LQ9BPX5 153 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 RNF24Q9Y225 148 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 DNAH1Q9P2D7 4330 aa5.04□□□□□ -1.6
SMG6-209ENST00000571442 IGHV3OR16-12A0A075B7B8 117 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 BORCS7-ASMTA0A0B4J1R7 106 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 NPIPB6E9PJ23 425 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 BOLA2-SMG1P6H3BVE0 249 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 J3KRW8 73 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 TAAR5O14804 337 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 BCL2L11O43521 198 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 DUSP14O95147 198 aaKnown RBP5.03□□□□□ -1.6
SMG6-209ENST00000571442 RANP62826 216 aaKnown RBP5.03□□□□□ -1.6
SMG6-209ENST00000571442 PDE6HQ13956 83 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 KHDC3LQ587J8 217 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 TMEM41BQ5BJD5 291 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 CASC10Q5T4H9 136 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 PRR9Q5T870 116 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 IL17DQ8TAD2 202 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 MRPL53Q96EL3 112 aaKnown RBP5.03□□□□□ -1.6
SMG6-209ENST00000571442 AGPAT4-IT1Q9H0P7 198 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 Q9H3A6 140 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 TMPRSS5Q9H3S3 457 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 CELA1Q9UNI1 258 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 HYDINQ4G0P3 5121 aa5.03□□□□□ -1.6
SMG6-209ENST00000571442 ALMS1Q8TCU4 4167 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 A0A0D9SG52 128 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 A0A1W2PPV4 95 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 JTBO76095 146 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 C1QBP02746 253 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 AZU1P20160 251 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 GCHFRP30047 84 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 FGF8P55075 233 aaPredicted RBP5.02□□□□□ -1.61
SMG6-209ENST00000571442 TAS2R45P59539 299 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 NANOS2P60321 138 aaKnown RBP5.02□□□□□ -1.61
SMG6-209ENST00000571442 GNG5P63218 68 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 SERF2P84101 59 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 GFI1BQ5VTD9 330 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 PQLC2Q6ZP29 291 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 ZNF767PQ75MW2 155 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 AKAP14Q86UN6 197 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 Q8TAT8 98 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 SUN5Q8TC36 379 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 GNPNAT1Q96EK6 184 aaPredicted RBP5.02□□□□□ -1.61
SMG6-209ENST00000571442 FAM19A4Q96LR4 140 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 IGF2BP2-AS1Q96M15 143 aa5.02□□□□□ -1.61
SMG6-209ENST00000571442 ZNF471Q9BX82 626 aaPredicted RBP5.02□□□□□ -1.61
SMG6-209ENST00000571442 KANTRA0A1W2PQU2 76 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 PLAC8L1A1L4L8 177 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 PGPA6NDG6 321 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 ZNF705GA8MUZ8 300 aaPredicted RBP5.01□□□□□ -1.61
SMG6-209ENST00000571442 GGTLC3B5MD39 225 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 DIRC3C9JPN6 131 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 NKX2-5P52952 324 aaPredicted RBP5.01□□□□□ -1.61
SMG6-209ENST00000571442 NUTF2P61970 127 aaKnown RBP5.01□□□□□ -1.61
SMG6-209ENST00000571442 PMS2P11Q13670 270 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 C9orf47Q6ZRZ4 202 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms