RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 S100ZQ8WXG8 99 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 RPUSD4Q96CM3 377 aaKnown RBP8.81□□□□□ -1
CTDNEP1-205ENST00000570828 FAM210BQ96KR6 192 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 SLC50A1Q9BRV3 221 aa8.81□□□□□ -1
CTDNEP1-205ENST00000570828 HECTD4Q9Y4D8 3996 aa8.8□□□□□ -1
CTDNEP1-205ENST00000570828 TRAV12-2A0A075B6T6 113 aa8.8□□□□□ -1
CTDNEP1-205ENST00000570828 UBE2L5PA0A1B0GUS4 154 aa8.8□□□□□ -1
CTDNEP1-205ENST00000570828 FAM24AA6NFZ4 105 aa8.8□□□□□ -1
CTDNEP1-205ENST00000570828 ZNF705GA8MUZ8 300 aaPredicted RBP8.8□□□□□ -1
CTDNEP1-205ENST00000570828 MRPS12O15235 138 aaKnown RBP8.8□□□□□ -1
CTDNEP1-205ENST00000570828 CRXO43186 299 aaPredicted RBP8.8□□□□□ -1
CTDNEP1-205ENST00000570828 OXA1LQ15070 435 aa8.8□□□□□ -1
CTDNEP1-205ENST00000570828 C10orf113Q5VZT2 155 aa8.8□□□□□ -1
CTDNEP1-205ENST00000570828 NRARPQ7Z6K4 114 aa8.8□□□□□ -1
CTDNEP1-205ENST00000570828 POM121L12Q8N7R1 296 aa8.8□□□□□ -1
CTDNEP1-205ENST00000570828 ZNF331Q9NQX6 463 aaPredicted RBP8.8□□□□□ -1
CTDNEP1-205ENST00000570828 LYRM2Q9NU23 88 aaPredicted RBP8.8□□□□□ -1
CTDNEP1-205ENST00000570828 SNRPCP09234 159 aaKnown RBP8.79□□□□□ -1
CTDNEP1-205ENST00000570828 S100A11P31949 105 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 SULT1A1P50225 295 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 HBG1P69891 147 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 HBG2P69892 147 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 BAXQ07812 192 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 ASAH1Q13510 395 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 OPCMLQ14982 345 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 UBE2DNLQ8IWF7 75 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 TMEM256Q8N2U0 113 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 OR1L4Q8NGR5 311 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 ENKURQ8TC29 256 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 TMEM37Q8WXS4 190 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 PFDN5Q99471 154 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 C11orf1Q9H5F2 150 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 DNAJC4Q9NNZ3 241 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 WDR83OSQ9Y284 106 aa8.79□□□□□ -1
CTDNEP1-205ENST00000570828 IGSF23A1L1A6 192 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 LYRM9A8MSI8 78 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 H3BTX0 84 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 PRB4P10163 310 aaPredicted RBP8.78□□□□□ -1
CTDNEP1-205ENST00000570828 TSPOP30536 169 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 RAB32Q13637 225 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 VWC2Q2TAL6 325 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 MORN5Q5VZ52 161 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 MIC13Q5XKP0 118 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 LINC01587Q99440 93 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 GPN1Q9HCN4 374 aaPredicted RBP8.78□□□□□ -1
CTDNEP1-205ENST00000570828 SLC39A9Q9NUM3 307 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 PXMP4Q9Y6I8 212 aa8.78□□□□□ -1
CTDNEP1-205ENST00000570828 SLC17A3O00476 420 aa8.77□□□□□ -1.01
CTDNEP1-205ENST00000570828 PRM2P04554 102 aa8.77□□□□□ -1.01
CTDNEP1-205ENST00000570828 IGLC2P0DOY2 106 aa8.77□□□□□ -1.01
CTDNEP1-205ENST00000570828 CDKN1BP46527 198 aa8.77□□□□□ -1.01
CTDNEP1-205ENST00000570828 TAS2R60P59551 318 aa8.77□□□□□ -1.01
CTDNEP1-205ENST00000570828 GUK1Q16774 197 aa8.77□□□□□ -1.01
CTDNEP1-205ENST00000570828 CT83Q5H943 113 aa8.77□□□□□ -1.01
CTDNEP1-205ENST00000570828 TMEM252Q8N6L7 170 aa8.77□□□□□ -1.01
CTDNEP1-205ENST00000570828 OR10J6PQ8NGY7 276 aa8.77□□□□□ -1.01
CTDNEP1-205ENST00000570828 DEFB130BP0DP73 79 aa8.76□□□□□ -1.01
CTDNEP1-205ENST00000570828 DEFB130AP0DP74 79 aa8.76□□□□□ -1.01
CTDNEP1-205ENST00000570828 HTN1P15515 57 aa8.76□□□□□ -1.01
CTDNEP1-205ENST00000570828 FGF7P21781 194 aa8.76□□□□□ -1.01
CTDNEP1-205ENST00000570828 RPL29P47914 159 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-205ENST00000570828 IL15RAQ13261 267 aa8.76□□□□□ -1.01
CTDNEP1-205ENST00000570828 TMEM88Q6PEY1 159 aa8.76□□□□□ -1.01
CTDNEP1-205ENST00000570828 C16orf74Q96GX8 76 aa8.76□□□□□ -1.01
CTDNEP1-205ENST00000570828 TRAV5A0A0B4J249 113 aa8.75□□□□□ -1.01
CTDNEP1-205ENST00000570828 H3BQ15 152 aa8.75□□□□□ -1.01
CTDNEP1-205ENST00000570828 ZNF561-AS1K7EIQ3 104 aa8.75□□□□□ -1.01
CTDNEP1-205ENST00000570828 MPDU1O75352 247 aa8.75□□□□□ -1.01
CTDNEP1-205ENST00000570828 UPK1BO75841 260 aa8.75□□□□□ -1.01
CTDNEP1-205ENST00000570828 AZU1P20160 251 aa8.75□□□□□ -1.01
CTDNEP1-205ENST00000570828 ATP6V1FQ16864 119 aa8.75□□□□□ -1.01
CTDNEP1-205ENST00000570828 LINC00336Q6ZUF6 198 aa8.75□□□□□ -1.01
CTDNEP1-205ENST00000570828 PLAC8L1A1L4L8 177 aa8.74□□□□□ -1.01
CTDNEP1-205ENST00000570828 PRAC2D3DTV9 90 aa8.74□□□□□ -1.01
CTDNEP1-205ENST00000570828 H7BYZ3 331 aa8.74□□□□□ -1.01
CTDNEP1-205ENST00000570828 RLN2P04090 185 aa8.74□□□□□ -1.01
CTDNEP1-205ENST00000570828 C15orf53Q8NAA6 179 aa8.74□□□□□ -1.01
CTDNEP1-205ENST00000570828 SAT2Q96F10 170 aaPredicted RBP8.74□□□□□ -1.01
CTDNEP1-205ENST00000570828 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
CTDNEP1-205ENST00000570828 F5H768 121 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 M0R2N4 97 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 PRAF2O60831 178 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 ZNF253O75346 499 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 SIX6O95475 246 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 ATP5G1P05496 136 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 ATP5G3P48201 142 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 RNF212Q495C1 297 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 LRRC37A5PQ49AS3 106 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 GFI1BQ5VTD9 330 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 OR5C1Q8NGR4 320 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 THAP6Q8TBB0 222 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 RNASE8Q8TDE3 154 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 TMEM263Q8WUH6 116 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 NPCDR1Q9BY65 106 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 PARD6GQ9BYG4 376 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 NMES1Q9C002 83 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 SLC25A31Q9H0C2 315 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 ZNF586Q9NXT0 402 aa8.73□□□□□ -1.01
CTDNEP1-205ENST00000570828 PTTG2Q9NZH5 202 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms