RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 H3BMQ9 156 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 GYPEP15421 78 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 TBPP20226 339 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 LEPP41159 167 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 TMBIM6P55061 237 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 RAP2BP61225 183 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 ANXA2RQ3ZCQ2 193 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 OR52I2Q8NH67 350 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 RAB2BQ8WUD1 216 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 VGLL1Q99990 258 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 MIXL1Q9H2W2 232 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 BATF3Q9NR55 127 aa6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 MRPL16Q9NX20 251 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-202ENST00000570380 LECT2O14960 151 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 HYPMO75409 117 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 IAPPP10997 89 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 PLP1P60201 277 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 LINC01556Q5JQF7 62 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 LCN15Q6UWW0 184 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 ACOT7LQ6ZUV0 252 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 LYZL2Q7Z4W2 148 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 EIF4E3Q8N5X7 224 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 DYNC2LI1Q8TCX1 351 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 ODF3Q96PU9 254 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 SLC50A1Q9BRV3 221 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 RBM38Q9H0Z9 239 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 DNAJC4Q9NNZ3 241 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 MTFP1Q9UDX5 166 aa6.86□□□□□ -1.31
CTDNEP1-202ENST00000570380 TRGV4A0A0C4DH28 118 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 C7orf71A4D174 169 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 FAM25AB3EWG3 89 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 FAM25CB3EWG5 89 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 FAM25GB3EWG6 89 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 SLC17A3O00476 420 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 CTDSP2O14595 271 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 RAB3DO95716 219 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 IGLV2-8P01709 118 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 IL5P05113 134 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 OR5G3P0C626 314 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 CXCL2P19875 107 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 ANXA7P20073 488 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 RPL37AP61513 92 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 AKR1C1Q04828 323 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 FAAP20Q6NZ36 180 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 MZT2AQ6P582 158 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 PATE2Q6UY27 113 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 CYP2G1PQ6ZSU1 146 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 TMEM229BQ8NBD8 167 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 BLNKQ8WV28 456 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 PCNPQ8WW12 178 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 BCL7BQ9BQE9 202 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 CCDC59Q9P031 241 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 TP53TG3Q9ULZ0 132 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 GPR132Q9UNW8 380 aa6.85□□□□□ -1.31
CTDNEP1-202ENST00000570380 A0A0B4J2A0 478 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 H3BTX0 84 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 NOL3O60936 208 aaKnown RBP6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 PITX3O75364 302 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 CCNKO75909 580 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 SLC25A5P05141 298 aaKnown RBP6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 SFTA3P0C7M3 94 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 LINC00869P0C866 280 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 AKR1C4P17516 323 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 CD300CQ08708 224 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 BTN1A1Q13410 526 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 ASAH1Q13510 395 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 IBA57Q5T440 356 aaKnown RBP6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 IQCF2Q8IXL9 164 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 AP3S1Q92572 193 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 ZNF479Q96JC4 524 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 TXNDC17Q9BRA2 123 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 EXTL2Q9UBQ6 330 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 SHPKQ9UHJ6 478 aa6.84□□□□□ -1.31
CTDNEP1-202ENST00000570380 CCDC160A6NGH7 325 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 KLLNB2CW77 178 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 RGS5O15539 181 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 ORM1P02763 201 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 VAMP1P23763 118 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 TAS2R19P59542 299 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 SURF2Q15527 256 aaPredicted RBP6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 ACOT6Q3I5F7 207 aaPredicted RBP6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 MORN5Q5VZ52 161 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 TM2D2Q9BX73 214 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 SLIRPQ9GZT3 109 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 KCNIP3Q9Y2W7 256 aa6.83□□□□□ -1.32
CTDNEP1-202ENST00000570380 LOC100131303A0A0U1RQF7 123 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 MPDU1O75352 247 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 IGHV3-30P01768 117 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 IGHV3-33P01772 117 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 IGHV3-30-3P0DP02 117 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 IGHV3-30-5P0DP03 117 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 TNFSF8P32971 234 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 TIRAPP58753 221 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 TDRG1Q3Y452 100 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 Q6ZQT7 251 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 SAT2Q96F10 170 aaPredicted RBP6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 ARL6Q9H0F7 186 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 ARV1Q9H2C2 271 aa6.82□□□□□ -1.32
CTDNEP1-202ENST00000570380 IGLV2-11P01706 119 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms