RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 KRTAP17-1Q9BYP8 105 aa9.41□□□□□ -0.9
SPG7-221ENST00000569720 DNAJC4Q9NNZ3 241 aa9.41□□□□□ -0.9
SPG7-221ENST00000569720 PXMP4Q9Y6I8 212 aa9.41□□□□□ -0.9
SPG7-221ENST00000569720 ISLRO14498 428 aa9.4□□□□□ -0.9
SPG7-221ENST00000569720 LINC00869P0C866 280 aa9.4□□□□□ -0.9
SPG7-221ENST00000569720 M6PRP20645 277 aa9.4□□□□□ -0.9
SPG7-221ENST00000569720 MEOX2P50222 304 aa9.4□□□□□ -0.9
SPG7-221ENST00000569720 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
SPG7-221ENST00000569720 GPR82Q96P67 336 aa9.4□□□□□ -0.9
SPG7-221ENST00000569720 MRPL32Q9BYC8 188 aaKnown RBP9.4□□□□□ -0.9
SPG7-221ENST00000569720 RPRMQ9NS64 109 aa9.4□□□□□ -0.9
SPG7-221ENST00000569720 GOLT1BQ9Y3E0 138 aa9.4□□□□□ -0.9
SPG7-221ENST00000569720 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.9
SPG7-221ENST00000569720 GALR1P47211 349 aa9.39□□□□□ -0.91
SPG7-221ENST00000569720 DEFB1P60022 68 aa9.39□□□□□ -0.91
SPG7-221ENST00000569720 PSG9Q00887 426 aa9.39□□□□□ -0.91
SPG7-221ENST00000569720 AKR1C8PQ5T2L2 129 aa9.39□□□□□ -0.91
SPG7-221ENST00000569720 UBE2DNLQ8IWF7 75 aa9.39□□□□□ -0.91
SPG7-221ENST00000569720 HSD17B11Q8NBQ5 300 aa9.39□□□□□ -0.91
SPG7-221ENST00000569720 C16orf92Q96LL3 132 aa9.39□□□□□ -0.91
SPG7-221ENST00000569720 HIGD1AQ9Y241 93 aa9.39□□□□□ -0.91
SPG7-221ENST00000569720 SOCS3O14543 225 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 COX7A2P2O60397 106 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 HBE1P02100 147 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 TAS2R45P59539 299 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 RHOBP62745 196 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 FFAR4Q5NUL3 377 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 FAM78BQ5VT40 261 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 C10orf113Q5VZT2 155 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 MIC13Q5XKP0 118 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 NIPSNAP3BQ9BS92 247 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 SLC35B3Q9H1N7 401 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 SLC25A32Q9H2D1 315 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 DKK2Q9UBU2 259 aa9.38□□□□□ -0.91
SPG7-221ENST00000569720 A0A0J9YX75 114 aa9.37□□□□□ -0.91
SPG7-221ENST00000569720 A0A1W2PPV4 95 aa9.37□□□□□ -0.91
SPG7-221ENST00000569720 BOLA2-SMG1P6H3BVE0 249 aa9.37□□□□□ -0.91
SPG7-221ENST00000569720 IFNA7P01567 189 aa9.37□□□□□ -0.91
SPG7-221ENST00000569720 ORM2P19652 201 aa9.37□□□□□ -0.91
SPG7-221ENST00000569720 NKX2-5P52952 324 aaPredicted RBP9.37□□□□□ -0.91
SPG7-221ENST00000569720 FAM222AQ5U5X8 452 aa9.37□□□□□ -0.91
SPG7-221ENST00000569720 RSG1Q9BU20 258 aa9.37□□□□□ -0.91
SPG7-221ENST00000569720 SLC25A22Q9H936 323 aa9.37□□□□□ -0.91
SPG7-221ENST00000569720 KIAA1109Q2LD37 5005 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 LOC102723971A0A1B0GUV8 181 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 PRSS29PA6NIE9 313 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 F6UB75 175 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 TEX46H3BTG2 121 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 M0R2N4 97 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 OR5G3P0C626 314 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 RRN3P1Q2M238 152 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 LGALS9BQ3B8N2 356 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 OR1B1Q8NGR6 318 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 RNF141Q8WVD5 230 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 TMEM208Q9BTX3 173 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
SPG7-221ENST00000569720 DOK5Q9P104 306 aa9.36□□□□□ -0.91
SPG7-221ENST00000569720 ZNF98A6NK75 572 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 HTN3P15516 51 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 RPL7P18124 248 aaKnown RBP9.35□□□□□ -0.91
SPG7-221ENST00000569720 SULT1A2P50226 295 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 PQLC2Q6ZP29 291 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 TMEM182Q6ZP80 229 aaPredicted RBP9.35□□□□□ -0.91
SPG7-221ENST00000569720 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 C1orf158Q8N1D5 194 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 OR10G4Q8NGN3 311 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 OR10G9Q8NGN4 311 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 OR10G7Q8NGN6 311 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 TMEM37Q8WXS4 190 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 SAT2Q96F10 170 aaPredicted RBP9.35□□□□□ -0.91
SPG7-221ENST00000569720 SLC25A39Q9BZJ4 359 aaPredicted RBP9.35□□□□□ -0.91
SPG7-221ENST00000569720 FUT9Q9Y231 359 aa9.35□□□□□ -0.91
SPG7-221ENST00000569720 YTHDF2Q9Y5A9 579 aaKnown RBP9.35□□□□□ -0.91
SPG7-221ENST00000569720 A0A1B0GVY2 172 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 H3BRN7 92 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 DUSP14O95147 198 aaKnown RBP9.34□□□□□ -0.91
SPG7-221ENST00000569720 GATA2P23769 480 aaPredicted RBP9.34□□□□□ -0.91
SPG7-221ENST00000569720 RAB2AP61019 212 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 DAD1P61803 113 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 BLOC1S1P78537 153 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 GUK1Q16774 197 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 RNF212Q495C1 297 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 KHDC3LQ587J8 217 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 TEX261Q6UWH6 196 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 IGF2BP2-AS1Q96M15 143 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 TMEM14CQ9P0S9 112 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 PKD1P98161 4303 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 PKHD1P08F94 4074 aa9.34□□□□□ -0.91
SPG7-221ENST00000569720 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
SPG7-221ENST00000569720 RTL8CO15255 209 aa9.33□□□□□ -0.92
SPG7-221ENST00000569720 SOHLH1Q5JUK2 328 aa9.33□□□□□ -0.92
SPG7-221ENST00000569720 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.33□□□□□ -0.92
SPG7-221ENST00000569720 PATE2Q6UY27 113 aa9.33□□□□□ -0.92
SPG7-221ENST00000569720 C20orf173Q96LM9 149 aa9.33□□□□□ -0.92
SPG7-221ENST00000569720 SH3BGRL3Q9H299 93 aa9.33□□□□□ -0.92
SPG7-221ENST00000569720 PLA2G2EQ9NZK7 142 aa9.33□□□□□ -0.92
SPG7-221ENST00000569720 DNAH11Q96DT5 4516 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms