RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 FAM78BQ5VT40 261 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 CSNK1G2-AS1Q8NCQ2 148 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 OR4B1Q8NGF8 309 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 C17orf77Q96MU5 243 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 SLC50A1Q9BRV3 221 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 NPCDR1Q9BY65 106 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 MFFQ9GZY8 342 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 C11orf68Q9H3H3 251 aaKnown RBP6.68□□□□□ -1.34
CAPN3-219ENST00000569136 PXMP4Q9Y6I8 212 aa6.68□□□□□ -1.34
CAPN3-219ENST00000569136 TRAV8-2A0A0B4J237 113 aa6.67□□□□□ -1.34
CAPN3-219ENST00000569136 ZNF705EA8MWA4 302 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-219ENST00000569136 MRPS12O15235 138 aaKnown RBP6.67□□□□□ -1.34
CAPN3-219ENST00000569136 CXCL3P19876 107 aa6.67□□□□□ -1.34
CAPN3-219ENST00000569136 ZFAND6Q6FIF0 208 aa6.67□□□□□ -1.34
CAPN3-219ENST00000569136 ATP5SQ99766 215 aa6.67□□□□□ -1.34
CAPN3-219ENST00000569136 PARD6GQ9BYG4 376 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-219ENST00000569136 WDR61Q9GZS3 305 aaKnown RBP6.67□□□□□ -1.34
CAPN3-219ENST00000569136 TMEM14CQ9P0S9 112 aa6.67□□□□□ -1.34
CAPN3-219ENST00000569136 XCL2Q9UBD3 114 aa6.67□□□□□ -1.34
CAPN3-219ENST00000569136 HSPB11Q9Y547 144 aa6.67□□□□□ -1.34
CAPN3-219ENST00000569136 DNAH7Q8WXX0 4024 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 A0A087WWL8 130 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 A8MTW9 85 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 ZNF253O75346 499 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 GIPP09681 153 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-219ENST00000569136 HIST1H1EP10412 219 aaKnown RBP6.66□□□□□ -1.34
CAPN3-219ENST00000569136 PDE6HQ13956 83 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 OXA1LQ15070 435 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 FCN2Q15485 313 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 ZNF738Q8NE65 137 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 C11orf45Q8TAV5 145 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 ZNF331Q9NQX6 463 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-219ENST00000569136 PPP1R14DQ9NXH3 145 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 MBD2Q9UBB5 411 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 KLK5Q9Y337 293 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-219ENST00000569136 GOLT1BQ9Y3E0 138 aa6.66□□□□□ -1.34
CAPN3-219ENST00000569136 TMEM189A5PLL7 270 aa6.65□□□□□ -1.34
CAPN3-219ENST00000569136 CXorf65A6NEN9 183 aa6.65□□□□□ -1.34
CAPN3-219ENST00000569136 NUPR2A6NF83 97 aa6.65□□□□□ -1.34
CAPN3-219ENST00000569136 IGLC2P0DOY2 106 aa6.65□□□□□ -1.34
CAPN3-219ENST00000569136 C4BPBP20851 252 aa6.65□□□□□ -1.34
CAPN3-219ENST00000569136 GDF5OSQ5U4N7 250 aa6.65□□□□□ -1.34
CAPN3-219ENST00000569136 CEMP1Q6PRD7 247 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-219ENST00000569136 ZNF705AQ6ZN79 300 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-219ENST00000569136 INO80EQ8NBZ0 244 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-219ENST00000569136 OR8A1Q8NGG7 326 aa6.65□□□□□ -1.34
CAPN3-219ENST00000569136 RPUSD4Q96CM3 377 aaKnown RBP6.65□□□□□ -1.34
CAPN3-219ENST00000569136 SAT2Q96F10 170 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-219ENST00000569136 MRPL32Q9BYC8 188 aaKnown RBP6.65□□□□□ -1.34
CAPN3-219ENST00000569136 PRELID1Q9Y255 219 aa6.65□□□□□ -1.34
CAPN3-219ENST00000569136 TIMM9Q9Y5J7 89 aa6.65□□□□□ -1.34
CAPN3-219ENST00000569136 TRAV5A0A0B4J249 113 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 F6UB75 175 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 H3BQ15 152 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 IGKV3-20P01619 116 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 TSPOP30536 169 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 CNN1P51911 297 aaKnown RBP6.64□□□□□ -1.35
CAPN3-219ENST00000569136 RHOBP62745 196 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 RNF182Q8N6D2 247 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 Q8NAQ8 132 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 OR11H7Q8NGC8 314 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 OR10J6PQ8NGY7 276 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 IGF2BP2-AS1Q96M15 143 aa6.64□□□□□ -1.35
CAPN3-219ENST00000569136 TRBV19A0A075B6N1 114 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 IGHV4-28A0A0C4DH34 117 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 ZNF705FA8MVS1 300 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-219ENST00000569136 C11orf94C9JXX5 98 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 AGRNO00468 2067 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 JTBO76095 146 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 NBEAP1P0C6P0 100 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 ZNF705DP0CH99 300 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-219ENST00000569136 ZNF705BP0CI00 300 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-219ENST00000569136 RBMY1A1P0DJD3 496 aaKnown RBP6.63□□□□□ -1.35
CAPN3-219ENST00000569136 RBMY1CP0DJD4 496 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 TAS2R45P59539 299 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 DEFB1P60022 68 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 HIST1H1AQ02539 215 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-219ENST00000569136 ZNF266Q14584 549 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 RBMY1FQ15415 496 aaKnown RBP6.63□□□□□ -1.35
CAPN3-219ENST00000569136 ACOT6Q3I5F7 207 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-219ENST00000569136 MORN5Q5VZ52 161 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 AMTNQ6UX39 209 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 MRPL53Q96EL3 112 aaKnown RBP6.63□□□□□ -1.35
CAPN3-219ENST00000569136 LINC00477Q96M19 166 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 AQP10Q96PS8 301 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 SMIM3Q9BZL3 60 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 SLC35B3Q9H1N7 401 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 OR51M1Q9H341 326 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 ZNF586Q9NXT0 402 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 FUT9Q9Y231 359 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 RFNGQ9Y644 331 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 TENM2Q9NT68 2774 aa6.63□□□□□ -1.35
CAPN3-219ENST00000569136 TEX48A0A1B0GUV7 120 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 PFDN1O60925 122 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 HBE1P02100 147 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 MBP02144 154 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 SPART-AS1P0CW21 52 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 TCTAP57738 103 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 GCSAMLQ5JQS6 135 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms